Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a15f
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 185 3e-47
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 183 1e-46
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 177 8e-45
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 175 3e-44
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 166 1e-41
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 153 1e-37
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 149 2e-36
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 96 2e-20
11_08_0071 + 28153043-28153555 31 0.75
08_02_1236 + 25454371-25456801,25456891-25457177,25457258-254574... 30 1.7
08_02_1528 + 27666356-27667081 29 4.0
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 29 4.0
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 5.3
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 28 5.3
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 28 5.3
11_06_0284 + 21909758-21913645 28 7.0
02_05_0552 - 29911280-29912541,29912633-29912762 28 7.0
04_01_0275 + 3648866-3649951 27 9.2
01_07_0228 - 42154400-42154498,42155120-42155196,42156341-421564... 27 9.2
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 27 9.2
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 185 bits (450), Expect = 3e-47
Identities = 95/165 (57%), Positives = 120/165 (72%), Gaps = 4/165 (2%)
Frame = +3
Query: 141 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 314
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 315 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 488
ARR+SWR+ISSIEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 489 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 623
PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIA 384
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 183 bits (445), Expect = 1e-46
Identities = 93/165 (56%), Positives = 121/165 (73%), Gaps = 4/165 (2%)
Frame = +3
Query: 141 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 314
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 315 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 488
ARR+SWR+ISSIEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 489 PESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 623
PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIA 166
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 177 bits (430), Expect = 8e-45
Identities = 91/160 (56%), Positives = 116/160 (72%), Gaps = 4/160 (2%)
Frame = +3
Query: 156 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 329
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 330 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 503
WR++SSIEQK EG +E + KEYR K+E EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 504 FYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 623
FYLKMKGDY+RYLAE TG R E + AY+ A +I+
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIA 160
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 175 bits (425), Expect = 3e-44
Identities = 92/164 (56%), Positives = 116/164 (70%), Gaps = 4/164 (2%)
Frame = +3
Query: 144 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 317
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 318 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNP 491
RR+SWR+ISSIEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 492 ESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 623
ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIA 165
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 166 bits (403), Expect = 1e-41
Identities = 87/161 (54%), Positives = 112/161 (69%), Gaps = 7/161 (4%)
Frame = +3
Query: 162 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 326
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 327 SWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESK 500
SWR++SSIEQK EG + A+ YR +VE EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 501 VFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS 623
VFYLKMKGDY+RYLAE TG R + + AYQ A +I+
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIA 170
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 153 bits (371), Expect = 1e-37
Identities = 71/149 (47%), Positives = 101/149 (67%)
Frame = +3
Query: 159 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 338
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 339 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 518
+ S+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 519 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 605
KGDYYRYLAE +TG + + + S AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 149 bits (361), Expect = 2e-36
Identities = 74/126 (58%), Positives = 89/126 (70%), Gaps = 2/126 (1%)
Frame = +3
Query: 252 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 425
G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG A + YR K+E EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 426 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQ 605
IC +L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E + AY+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137
Query: 606 DAFEIS 623
A +I+
Sbjct: 138 AAQDIA 143
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 95.9 bits (228), Expect = 2e-20
Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Frame = +3
Query: 219 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIE--QKTEGSERKQQMA 392
M AM V + L+ EERNLLSV YKN++GA+R++ R+I SIE ++T+G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 393 KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRH 572
EYR KVE E+ +IC DV+ ++DK KGDYYRYLAE TG +
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102
Query: 573 SVVEDSQKAYQ 605
V E S AY+
Sbjct: 103 EVSELSLNAYE 113
>11_08_0071 + 28153043-28153555
Length = 170
Score = 31.1 bits (67), Expect = 0.75
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 146 GRWKRTNSLMPLSEGEKCI*TSKFKHNISFSLALNDILVLT 24
G W R N+ PL + + H++S S++L +ILV T
Sbjct: 130 GTWLRANTSCPLCRADTTPSSGDLHHHLSISVSLEEILVRT 170
>08_02_1236 + 25454371-25456801,25456891-25457177,25457258-25457416,
25457561-25457740,25457823-25458017,25459059-25459157,
25459508-25460137,25460250-25460591
Length = 1440
Score = 29.9 bits (64), Expect = 1.7
Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Frame = +3
Query: 165 EELVQRAKLAEQAERYDDMAAAMKE--VTETGVELSNEERNLLSVAYKNVVGARRSSWRV 338
+ ++ R A + DDM A MKE + + L E+R L + K + ++
Sbjct: 941 QSMIGRMNRANSIQEIDDMIA-MKEKIIAHESISLKEEKRLLQDI--KELKAQKKQLSSN 997
Query: 339 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDK-HLIPKASNPESKVFYLK 515
+ S + E E+K+ + ++ ++ ++K+ + ++ L DK I KA + E
Sbjct: 998 MGSKAEMGEAFEQKEHIHEQQKI-LKKDSDVLLTNLKSLEDKTRFIKKAFDDER------ 1050
Query: 516 MKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 626
D R L E + H V QKAY + FE+ K
Sbjct: 1051 ---DALRKLTE--EHQAAHEV---RQKAYDEWFELKK 1079
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 147 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 326
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 327 SWRVISSIEQKTE-GSERKQQMAKEYRV 407
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.7 bits (61), Expect = 4.0
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Frame = +3
Query: 138 PSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 314
P + D E++ ++ K AE ER + KE ++ SNEE L +KN
Sbjct: 327 PHYRVEEDGEKIKLEEIKGAESVERINFEERITKEEKNEAMKSSNEEVVSLVTGWKN--- 383
Query: 315 ARRSSWRV-ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLD 461
R W V + ++ T K+ AK + + +LR +LG +D
Sbjct: 384 -RIEEWDVDVDENDKDTRKLTPKRDPAKVDKAEKYTDLRSPICCILGHVD 432
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3
Query: 420 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 524
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 28.3 bits (60), Expect = 5.3
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +3
Query: 267 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 443
N + LLS AY N+ W + ISS+ Q+ S ++ Y+ + K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 444 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV-ATG 560
L ++D L+ + +SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +3
Query: 156 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 317
V+ + L +R++L++ Y ++ A E+T E+ +ERN + +Y N
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309
Query: 318 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 410
+RSS K S+ Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 27.9 bits (59), Expect = 7.0
Identities = 20/88 (22%), Positives = 41/88 (46%)
Frame = +3
Query: 168 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 347
+L + + E+ + ++ ++E+T+ G E EE+N G + +
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461
Query: 348 IEQKTEGSERKQQMAKEYRVKVEKELRE 431
E+K +G R+++ +E+ K EKE E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 87 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 233
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +3
Query: 321 RSSWRVISSIEQKTEGSERKQQMAKEYR--VKVEKELREICYDVL 449
R SW +ISS+ +K E + Y ++V ++R++ +D +
Sbjct: 19 RRSWMLISSLGKKLASEEEWMEYEYHYSRGIRVSPDIRKVLFDCI 63
>01_07_0228 -
42154400-42154498,42155120-42155196,42156341-42156425,
42156511-42156956,42157070-42157194,42157273-42157523
Length = 360
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +3
Query: 438 YDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQD 608
YD +G D +I + P+ + K KGDY LAEV H V++D K+ D
Sbjct: 165 YDFIGSTDCTVIKLRNYPDD--WDEKKKGDYLLTLAEV-----NHGVLKDKLKSRDD 214
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/84 (22%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 192 AEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR---RSSWRVISSIEQKT 362
A AE ++ A KE+ +E+ + + A +++V + +SS R I ++++
Sbjct: 129 ARYAEVVQELDQAKKELLRLRLEVRSAAE-AKAKAERDIVASACTIQSSLRAIDEMKRRV 187
Query: 363 EGSERKQQMAKEYRVKVEKELREI 434
+ + + + + R++ E+E REI
Sbjct: 188 DEANEEHVLVELARIEAERERREI 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,116,340
Number of Sequences: 37544
Number of extensions: 345925
Number of successful extensions: 1143
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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