Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a13r
(749 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7796 Cluster: PREDICTED: hypothetical protein;... 40 0.049
UniRef50_Q17PL5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_UPI00015ADEEB Cluster: hypothetical protein NEMVEDRAFT_... 38 0.35
UniRef50_A7IV97 Cluster: Putative uncharacterized protein M717R;... 38 0.35
UniRef50_Q7R2X8 Cluster: GLP_385_75980_77953; n=1; Giardia lambl... 36 1.1
UniRef50_UPI00006CDDC5 Cluster: hypothetical protein TTHERM_0029... 34 3.3
UniRef50_Q74DF4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A7SUT1 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.3
UniRef50_A2ERS0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A2DM79 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_A5DCW2 Cluster: Putative uncharacterized protein; n=1; ... 34 3.3
UniRef50_Q8XM59 Cluster: Beta-galactosidase; n=3; Clostridium pe... 34 4.3
UniRef50_A2DBQ6 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A0CFI9 Cluster: Chromosome undetermined scaffold_176, w... 34 4.3
UniRef50_UPI00006CD174 Cluster: UvrD/REP helicase family protein... 33 5.7
UniRef50_Q6YQS6 Cluster: Putative uncharacterized protein; n=4; ... 33 5.7
UniRef50_Q4HJ87 Cluster: Probable periplasmic protein Cj0199c , ... 33 5.7
UniRef50_Q650P3 Cluster: Two-component system response regulator... 33 7.5
UniRef50_Q54GE1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_Q1LEG2 Cluster: Transcriptional regulators, TraR/DksA f... 33 9.9
UniRef50_Q7PDL7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 33 9.9
UniRef50_Q4Z561 Cluster: Ubiquitin-protein ligase 1, putative; n... 33 9.9
UniRef50_Q21875 Cluster: Putative uncharacterized protein pqn-55... 33 9.9
>UniRef50_UPI0000DB7796 Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 606
Score = 40.3 bits (90), Expect = 0.049
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 13/129 (10%)
Frame = -2
Query: 349 NNLYEILNENGHTEFQIECFNGCKMFIEDYCERNERKVQSVLHL---DLIRFVTE---SE 188
N L + +++ E Q N +M++E Y E K + L D+++ +++ +
Sbjct: 436 NYLIHLESKSSLIEHQKISMNLLRMYLEVYLAGEENKKVTPLSKRIRDVLKKISQFNLNN 495
Query: 187 ILICQCCDEQLNRFS-----CKEGHLNMFCSLTFTQINSDEYLVCKACNATARSELYN-- 29
I C C E +N S C +GH+ C++T Q+ Y C C L
Sbjct: 496 IETCNLCGEMINDLSWKISKCSQGHILPRCAITLLQVTVVPYKTCPICGLIFHPCLDQEF 555
Query: 28 IDPMCVFCD 2
+ C FCD
Sbjct: 556 KETRCPFCD 564
>UniRef50_Q17PL5 Cluster: Putative uncharacterized protein; n=1; Aedes
aegypti|Rep: Putative uncharacterized protein - Aedes
aegypti (Yellowfever mosquito)
Length = 681
Score = 38.7 bits (86), Expect = 0.15
Identities = 49/222 (22%), Positives = 91/222 (40%), Gaps = 25/222 (11%)
Frame = -2
Query: 646 NVFSVLLDNPTKSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTD---VYKMKLYL 476
+ +LLDNPT + NY DC ++R+ + + + + + D Y +KL L
Sbjct: 424 DAMQILLDNPTLRMTNYYDCAEVVRFSGNRTPDAVKPLEQRASNNANVDDGYAYHLKLQL 483
Query: 475 ICL---ILHNKLKSIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNENGHTEF 305
+ L + H K K I+ + ++ ++ I + HA K I + + + +
Sbjct: 484 VQLGARLSHFK-KRCQAIA---EVLHNQLQFIRMVIEILHAAKVIAYFLHVRHTSIELSY 539
Query: 304 -QIECFNGCKMFIEDYCERNERKVQSVLHLDLIRFVTE-----SEILI----------CQ 173
Q+ + FI+++ E N +HL L + E +E+L+ C
Sbjct: 540 HQLLTIRCLRNFIQEFVEDNFPGDYEHVHLSLKPPMEEVIARANELLVTAQQQLYQEECT 599
Query: 172 CCDEQL--NRFSCKEGHLNMFCSLTFTQINSDEY-LVCKACN 56
C + + +C E H CS+T QI +C+ C+
Sbjct: 600 FCGGSIPEAKLTCVENHQTFRCSITKQQIAMGHVETMCEMCD 641
>UniRef50_UPI00015ADEEB Cluster: hypothetical protein
NEMVEDRAFT_v1g49759; n=1; Nematostella vectensis|Rep:
hypothetical protein NEMVEDRAFT_v1g49759 - Nematostella
vectensis
Length = 105
Score = 37.5 bits (83), Expect = 0.35
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -2
Query: 259 CERNERKVQSVLHLDLIRF-VTESEILICQCCDEQLNRFSCKEGHLNMFCSLTFTQIN 89
C ++ + S +H DL F S++ +C C LN FSC LN+ CS + +N
Sbjct: 19 CVHSDLNLCSCVHSDLNLFSCVHSDLNLCSCVHSDLNLFSCVHSDLNL-CSCVHSDLN 75
Score = 34.3 bits (75), Expect = 3.3
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 259 CERNERKVQSVLHLDLIRF-VTESEILICQCCDEQLNRFSCKEGHLNMFCSLTFTQIN 89
C ++ + S +H DL F S++ +C C LN SC LN+ CS + +N
Sbjct: 39 CVHSDLNLCSCVHSDLNLFSCVHSDLNLCSCVHSDLNLCSCVHSDLNL-CSCVHSDLN 95
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -2
Query: 232 SVLHLDL-IRFVTESEILICQCCDEQLNRFSCKEGHLNMFCSLTFTQIN 89
S +H DL + S++ +C C LN FSC LN+ CS + +N
Sbjct: 8 SCVHSDLNLCSCVHSDLNLCSCVHSDLNLFSCVHSDLNL-CSCVHSDLN 55
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 259 CERNERKVQSVLHLDL-IRFVTESEILICQCCDEQLNRFSCKEGHLNMFCSLTFTQIN 89
C ++ + S +H DL + S++ +C C LN SC LN+ CS + +N
Sbjct: 49 CVHSDLNLFSCVHSDLNLCSCVHSDLNLCSCVHSDLNLCSCVHSDLNL-CSCVHSDLN 105
>UniRef50_A7IV97 Cluster: Putative uncharacterized protein M717R;
n=2; Paramecium bursaria Chlorella virus A1|Rep:
Putative uncharacterized protein M717R - Chlorella virus
MT325
Length = 387
Score = 37.5 bits (83), Expect = 0.35
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -2
Query: 445 SIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNENGHTEFQIECFNGCKMFIE 266
SI N S PL +I KD +++H K + N +G I C +GC + I
Sbjct: 91 SITNASGNLPL-HYAISSTKDLHIISHVYKKFPEALNVANSSGQYPLHIACQHGCSLEIV 149
Query: 265 DYCERNERKVQSV 227
+E+ VQ V
Sbjct: 150 KILYTSEQDVQDV 162
>UniRef50_Q7R2X8 Cluster: GLP_385_75980_77953; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_385_75980_77953 - Giardia lamblia
ATCC 50803
Length = 657
Score = 35.9 bits (79), Expect = 1.1
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = -2
Query: 373 LNHATKTINNLYEILNENGHTEFQIECFNGCKMFIEDYCERNERKVQSVLHLDLIRFVTE 194
+N+ TK +N +Y++ +ENG+T F G ++ E++ R L+ +
Sbjct: 17 INYITKHLNEMYDVRDENGNTGLMHAAFYGNVAVVQLLVEKSAR---------LLNLARK 67
Query: 193 SEILICQCCDEQLNRFS 143
+ ++ C C D L R S
Sbjct: 68 TALMQCVCSDYSLGRAS 84
>UniRef50_UPI00006CDDC5 Cluster: hypothetical protein
TTHERM_00295440; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00295440 - Tetrahymena
thermophila SB210
Length = 683
Score = 34.3 bits (75), Expect = 3.3
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = -2
Query: 463 LHNKLKSIMNISMEPPLPE-TSIEKVKDFILLNHATKTINNLYEILNENGHTEFQIECFN 287
LHN ++ +I L + ++E +D+ILL N +I NG EC
Sbjct: 101 LHNFFQNDQDIEKLSNLIQFQALECEEDYILLGGMCIERQNCIKIKFYNGFLSCY-ECQK 159
Query: 286 GCKMFIEDYCERNERKVQSVLHLDLIRFVTESEILICQCCDEQLNRFSCKEGHLNMFCSL 107
G + + C K S ++L+ ++ + +C CD+ N F C +G+ N+F
Sbjct: 160 GYYLNDQGKCV----KCTSFMYLNSLKREIDQTNQLCNECDQDNNCFQCIDGY-NLFYDK 214
Query: 106 TFTQ 95
F Q
Sbjct: 215 NFQQ 218
>UniRef50_Q74DF4 Cluster: Putative uncharacterized protein; n=1;
Geobacter sulfurreducens|Rep: Putative uncharacterized
protein - Geobacter sulfurreducens
Length = 393
Score = 34.3 bits (75), Expect = 3.3
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Frame = -2
Query: 646 NVFSVLLDNPTKSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLICL 467
N FS ++N K+++ + + +K++P DY LYQ Y
Sbjct: 37 NAFSAGIENSIKTIVKKHGKAAVFPVKRALVKKVPGKDYRHLYQSADAIGY--------- 87
Query: 466 ILHNKLKSI-MNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNENGHTEFQI-EC 293
+L N +S+ +IS+EP EKVK + ++ T + E + ++
Sbjct: 88 LLTNLERSMPRSISVEPTHASMKAEKVKHIVFIDDLIGTGKRVNSFWQEWANKSYKSWLS 147
Query: 292 FNGCKMFIEDY 260
F C+++I Y
Sbjct: 148 FRYCELYILSY 158
>UniRef50_A7SUT1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 374
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 321 FSFRISY-KLLIVLVA*FNNIKSFTFSIDVSGSGGSILIFIMLFNLLCKIKHIKYNF 488
F+F + Y L+VL+ FN S I VSGSG L+ M+ + +C+ ++ F
Sbjct: 65 FAFSLMYFASLVVLIEYFNRHLSLANGIAVSGSGAGTLVISMIVDEMCRRYGLRAGF 121
>UniRef50_A2ERS0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1155
Score = 34.3 bits (75), Expect = 3.3
Identities = 28/106 (26%), Positives = 50/106 (47%)
Frame = -2
Query: 622 NPTKSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLICLILHNKLKS 443
+P + LL +++ ++ +++KLK+ P Q G+ D+ K+K + K+KS
Sbjct: 692 SPPEKLLEFQNTVSFSLMQSLKLKQFP--------QPGNFDLQKLKEKSVIYETIEKMKS 743
Query: 442 IMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNENGHTEF 305
+N +EP L E+ + I T N + EI E G +F
Sbjct: 744 SINEKIEPELSESYDDLPDVEITYEKVTTEPNIVIEI--EKGFIQF 787
>UniRef50_A2E1J4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2215
Score = 34.3 bits (75), Expect = 3.3
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = -2
Query: 613 KSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLIC----LILHNKLK 446
K L++ + +N + +K+K S Y+K Y + ++ KMK Y + +I+ NK
Sbjct: 1972 KYLIDENEIINFCKEMNVKVKPRISC-YEKKYIND-IEITKMKKYKVKTKNGMIICNKNS 2029
Query: 445 SIMNISMEPPLPETSIEKVKDFILLNH 365
SIMNI+ E + + +FI L H
Sbjct: 2030 SIMNITSNYDSSEVTTLQFPEFIALQH 2056
>UniRef50_A2DM79 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1353
Score = 34.3 bits (75), Expect = 3.3
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = -2
Query: 292 FNGCKMFIEDYCERNERKVQSVLHLDLIRFVTESEILICQCCDEQLNRFSCKEGHLNMFC 113
FN +EDYC+ N + ++ES +LI CD+ N+ S L C
Sbjct: 467 FNSVADMLEDYCDLNNYSYHRITPASTELTMSESNVLI---CDQSYNKLSLDYQFLPHVC 523
Query: 112 SLTFTQINSD 83
+L T + D
Sbjct: 524 ALVSTVVVID 533
>UniRef50_A5DCW2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1017
Score = 34.3 bits (75), Expect = 3.3
Identities = 26/116 (22%), Positives = 53/116 (45%)
Frame = -2
Query: 520 YQDGHTDVYKMKLYLICLILHNKLKSIMNISMEPPLPETSIEKVKDFILLNHATKTINNL 341
Y D ++Y++K L + + I N+ L ET +E V + + +N
Sbjct: 726 YDDKKDEIYQLKAEFAEASLRDDIADISNLEDLSTLSETLVEIVSMLSSRSSDAEIMN-- 783
Query: 340 YEILNENGHTEFQIECFNGCKMFIEDYCERNERKVQSVLHLDLIRFVTESEILICQ 173
++IL + E +E + K+ DY N R+ + +++L ++ +E+LI +
Sbjct: 784 FQILQQTYQIENNLETLDWPKLTWLDYLSANMRRSECPEYIEL--YLKAAELLIVE 837
>UniRef50_Q8XM59 Cluster: Beta-galactosidase; n=3; Clostridium
perfringens|Rep: Beta-galactosidase - Clostridium
perfringens
Length = 804
Score = 33.9 bits (74), Expect = 4.3
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = -2
Query: 547 LPSADYDKLYQDG-HTDVYKMKLYLICLILHNKLK--SIMNISMEPPLPETSIEKVKDFI 377
L + DY K+++DG + D Y + H ++ I+++ E PL E + +++KDF+
Sbjct: 574 LTNCDYIKIFKDGIYIDTYYPNKEKFPNLPHPPIEVSHILSMDSEIPLTEEAKKEIKDFV 633
Query: 376 LLNHATKTINNLYE 335
L + NL E
Sbjct: 634 LNKLKDSNLTNLAE 647
>UniRef50_A2DBQ6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 597
Score = 33.9 bits (74), Expect = 4.3
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -2
Query: 613 KSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLICLILHNKLKSIMN 434
K L ++ ++ L L +L S + DKL +G T VY KLY I + L +M
Sbjct: 384 KQLASFTKVISPLEESLANLTKLRS-EIDKL-PNGQTKVYSTKLYDISTNYLDGLVKVMK 441
Query: 433 ISMEPPLPETSIEKVKDF--ILLNHATKTINNLYEILNENGHTEFQIECFNGCKMFIE 266
IS + P + DF A + + +I+++ G +E ++ N +F++
Sbjct: 442 ISRDHPSKTVEPSSLNDFSSASCQAAQSSATAIEDIISKKGGSEDRV--INTMSLFVQ 497
>UniRef50_A0CFI9 Cluster: Chromosome undetermined scaffold_176,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_176,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1165
Score = 33.9 bits (74), Expect = 4.3
Identities = 25/93 (26%), Positives = 37/93 (39%)
Frame = -2
Query: 325 ENGHTEFQIECFNGCKMFIEDYCERNERKVQSVLHLDLIRFVTESEILICQCCDEQLNRF 146
+N +TE IEC G + ++C++ Q L L + + + L CQ N
Sbjct: 42 DNTYTEICIECNQGFYLK-NNHCQQCP---QGCLSCTLDKQLEQVRCLDCQQGHSLFNES 97
Query: 145 SCKEGHLNMFCSLTFTQINSDEYLVCKACNATA 47
K G L C + EY+ C CN A
Sbjct: 98 CQKCGELCQICKKILNKYTGKEYMKCLKCNHNA 130
>UniRef50_UPI00006CD174 Cluster: UvrD/REP helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: UvrD/REP helicase
family protein - Tetrahymena thermophila SB210
Length = 1536
Score = 33.5 bits (73), Expect = 5.7
Identities = 23/109 (21%), Positives = 42/109 (38%)
Frame = -2
Query: 460 HNKLKSIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNENGHTEFQIECFNGC 281
+ + + N S P+ + + I N + I N ++NE H Q +CF C
Sbjct: 1115 NQNINELQNCSNLNPIKLNNETGLNQKIGQNSQERDIGNTIPLINEKIHNREQNQCFFNC 1174
Query: 280 KMFIEDYCERNERKVQSVLHLDLIRFVTESEILICQCCDEQLNRFSCKE 134
I + ++Q+ + + SE+ I Q Q+N + E
Sbjct: 1175 NDLISIESSHEKEEIQNNDDIQFEQDSLSSELDIMQTSQLQINPINLSE 1223
>UniRef50_Q6YQS6 Cluster: Putative uncharacterized protein; n=4;
Candidatus Phytoplasma asteris|Rep: Putative
uncharacterized protein - Onion yellows phytoplasma
Length = 115
Score = 33.5 bits (73), Expect = 5.7
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -2
Query: 739 CAMIMFXRQIWYRK-LRNRIETCFMTTENTMDNVFSVLLDNPTKSLLNYRDC---LNLLR 572
C +++F +YRK ++N+I ++ N + L NP K+ +D NLL+
Sbjct: 16 CLLVIFIMNYFYRKNVKNKIINYLLSCSNLEQEILKSFLQNPHKTFPLTKDANITKNLLQ 75
Query: 571 YRTMKLKELPS 539
+ LKE+ S
Sbjct: 76 LNIIFLKEIVS 86
>UniRef50_Q4HJ87 Cluster: Probable periplasmic protein Cj0199c ,
putative; n=1; Campylobacter lari RM2100|Rep: Probable
periplasmic protein Cj0199c , putative - Campylobacter
lari RM2100
Length = 391
Score = 33.5 bits (73), Expect = 5.7
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = -2
Query: 667 TTENTMDNVFSVL-LDNPTKSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYK 491
T +N ++ SVL LD +L N LN + M L YD L Q+ +TD++
Sbjct: 230 TAQNAQNDYDSVLKLDLAKFNLANENFILNNINL-DMNFNNLSKKAYDSLVQNSNTDIFS 288
Query: 490 MKLYLICLILHNKLKSIMNISME 422
M L + N + N+S E
Sbjct: 289 MMLLASQFLKANPQIILNNLSFE 311
>UniRef50_Q650P3 Cluster: Two-component system response regulator;
n=2; Bacteroides fragilis|Rep: Two-component system
response regulator - Bacteroides fragilis
Length = 579
Score = 33.1 bits (72), Expect = 7.5
Identities = 26/110 (23%), Positives = 50/110 (45%)
Frame = -2
Query: 499 VYKMKLYLICLILHNKLKSIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNEN 320
VY +Y L H KL+ I+NI+ + P T I + + I+ + +++ + ++
Sbjct: 72 VYYRMVYSTKLFPHEKLRLILNITHKTQTPLTLIHHLLEEIISDSLSESTSQ--KVKRIL 129
Query: 319 GHTEFQIECFNGCKMFIEDYCERNERKVQSVLHLDLIRFVTESEILICQC 170
G+T + C+ +F D E S + +L F+T ++ QC
Sbjct: 130 GYTSHIMSCYQNIAVF--DDKENELHPGSSPIEFELYTFITS---IVNQC 174
>UniRef50_Q54GE1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 671
Score = 33.1 bits (72), Expect = 7.5
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -2
Query: 547 LPSADYDK-LYQDGHTDVYKMKLYLICLILHNKLKSIMNI-SMEPPLPETSIEKVKDFIL 374
+ S DYD L + G T K + I ++ +K N S PP+P S + I
Sbjct: 354 IQSYDYDSPLSESGDTTE---KYFAIKNVIEKYIKPTTNSNSTLPPIPSNSTKVAYGTIQ 410
Query: 373 LNHATKTINNLYEILNEN 320
+ AT NNL ++N N
Sbjct: 411 ITQATSLFNNLANLVNSN 428
>UniRef50_Q1LEG2 Cluster: Transcriptional regulators, TraR/DksA
family; n=1; Ralstonia metallidurans CH34|Rep:
Transcriptional regulators, TraR/DksA family - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Length = 111
Score = 32.7 bits (71), Expect = 9.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 97 QINSDEYLVCKACNATARSELYNIDPMCVFC 5
+++S Y +C AC++ EL N DP VFC
Sbjct: 73 RLDSGTYGLCCACHSDLEPELLNADPAVVFC 103
>UniRef50_Q7PDL7 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=4;
Plasmodium (Vinckeia)|Rep: ERYTHROCYTE MEMBRANE PROTEIN
PFEMP3 - Plasmodium yoelii yoelii
Length = 2179
Score = 32.7 bits (71), Expect = 9.9
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = -2
Query: 499 VYKMKLYLICLILHNKLKSIMNISMEPPLPETSIEKVKDFILLNHATKTINNL-YEILNE 323
+YK+K C I+ N LK I N + + + K L ++ K NN+ Y+I+N
Sbjct: 46 IYKIK----CYIIQNALK-IYNSQSKSSI----LNNYKTLSYLLYSQKWDNNIIYDIINN 96
Query: 322 NGHTEFQIECFNGCKMFIEDYCERNERK 239
+ + E FNG F ED + N+ K
Sbjct: 97 SNYFCNYFELFNGENYFTEDIHKTNKIK 124
>UniRef50_Q4Z561 Cluster: Ubiquitin-protein ligase 1, putative; n=15;
Eukaryota|Rep: Ubiquitin-protein ligase 1, putative -
Plasmodium berghei
Length = 1458
Score = 32.7 bits (71), Expect = 9.9
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 406 SQEVVVPY*YSLC-FLIYYVKSNILNTISFCKHLYVHLDIAYHNQLTAILLIS*FYTSAN 582
SQ + Y Y C +++Y+ NI+N S K++ +H+D N + + + +
Sbjct: 1159 SQRDMEIYSYHFCLYMLYFTLFNIINKYSIAKNIILHID---RNIIDYCIFFIQKFNISY 1215
Query: 583 LSNPDNSVSSLL 618
L N +NSV+ L
Sbjct: 1216 LKNIENSVNYFL 1227
>UniRef50_Q21875 Cluster: Putative uncharacterized protein pqn-55;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein pqn-55 - Caenorhabditis elegans
Length = 1717
Score = 32.7 bits (71), Expect = 9.9
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = -2
Query: 457 NKLKSIMNISMEPPLPETSIEKVKDFILLNHAT----KTINNL---YEILNENGHTEFQI 299
N+LK++ I++ PP+P + +L NH T +TI N+ Y + ++N +F +
Sbjct: 510 NRLKNM--ITLAPPIPAEVTQTTDATVLSNHQTAAILQTITNMDIRYPLSSQN--MKFTL 565
Query: 298 ECFNGCKMFIEDYCERNERKVQSVLHLDLIRFV 200
CF G I+ NE+ ++ + D I +V
Sbjct: 566 NCFPGFYPAIQMCNYLNEKDIRFGVPTDAIFYV 598
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,785,549
Number of Sequences: 1657284
Number of extensions: 13589562
Number of successful extensions: 37005
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 35160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36984
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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