Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a13r
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 28 1.2
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 28 1.6
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 27 2.9
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 26 5.0
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 5.0
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 26 6.6
SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ... 26 6.6
SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate syntha... 26 6.6
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 26 6.6
SPAC24B11.08c |||COPII-coated vesicle component Erv46|Schizosacc... 26 6.6
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 26 6.6
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 25 8.7
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 25 8.7
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 25 8.7
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 25 8.7
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Frame = -2
Query: 463 LHNKLKSIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILNENGHTEFQIE---- 296
++ L I+ + LP I + L++ T+ L+E N +G+ EF +
Sbjct: 808 IYTLLNCILESGLPMKLPRNQIPE------LDYLTQICFELFERTNPSGNKEFSVRITLS 861
Query: 295 --CFNGCKMFIE---DYCERNERKVQSVLHLDLIRFVTESEIL 182
C+ C + + +C + HLDL +F+T++E L
Sbjct: 862 PGCYAQCPLDMNLDAKHCISVSPRRSLTRHLDLQQFITKTEDL 904
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 631 LLDNPTKSLLNYRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLI 473
LL+NP+ S+L Y+D L R K++ + + D Y+ LYL+
Sbjct: 370 LLNNPSSSILPYQDGL-----RPFMFKDVVGQGHSEFGTSQQQDAYEFLLYLL 417
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 112 SLTFTQINSDEYLVCKACNATARS 41
+L+ TQ NSD + VC AC RS
Sbjct: 530 ALSATQNNSDSFAVCLACAMIQRS 553
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 26.2 bits (55), Expect = 5.0
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -1
Query: 440 NEYQYGTTTS*--DIYRKSERFYIIKSCN 360
+EY++GT S I+RK E FY K+C+
Sbjct: 85 DEYRHGTCESKCGHIFRKGEVFYRCKTCS 113
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 26.2 bits (55), Expect = 5.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 262 YCERNERKVQSVLHLDLIRFVTESEILICQCCDE-QLNRFSCKEGHLNMFCSLTFTQIN- 89
+ E NER+VQS + ++ + E E + D+ + + LN F + Q+N
Sbjct: 3 FTEANEREVQSSYEKENVKIIREEEAKDQESTDDIAVEDGTGTSPDLNFFSTQNVMQMNF 62
Query: 88 SDEY 77
DEY
Sbjct: 63 EDEY 66
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 559 KLKELPSADYDKLYQDGHT 503
K++E DYDKL+ +GH+
Sbjct: 543 KIEEQSKRDYDKLHGEGHS 561
>SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 6.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 583 NLLRYRTMKLKELPSADYDKLYQDGHTDVYKMK 485
+L RY M L LP++++D + VYK+K
Sbjct: 71 DLKRYTFMGLLTLPTSEHDVYFNATRVLVYKLK 103
>SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate synthase
Arg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 367 HATKTINNLYEILN 326
H TKT+NNL E++N
Sbjct: 278 HLTKTVNNLRELMN 291
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = -2
Query: 178 CQCCDE--QLNRFS---CKEGHLNMFCSLTFTQINSDEYLVCKACNA 53
C C+ Q N S C GH+ CS+T ++ C CN+
Sbjct: 593 CPACEATVQFNNTSLATCDNGHVWRRCSVTMLLLSQKAAKYCAVCNS 639
>SPAC24B11.08c |||COPII-coated vesicle component
Erv46|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 25.8 bits (54), Expect = 6.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 517 QDGHTDVYKMKLYLICLILHNKLKSIMNISMEPPL 413
Q+G+ V+ + Y+ L LH+ SI ++S PPL
Sbjct: 221 QNGNQHVHDTRDYINELDLHDMSHSIHHLSFGPPL 255
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 6.6
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 100 TQINSDEYLVCKACNATARS 41
TQ NSD + VC AC RS
Sbjct: 562 TQNNSDSFAVCVACALVQRS 581
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 25.4 bits (53), Expect = 8.7
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 445 SIMNISMEPPLPETSIEKVKDFILLNHATKTINNLYEILN 326
SI NIS P S E+ KD+ L N++ + + EI N
Sbjct: 353 SIRNISSIPQFLSLSEEQTKDY-LPNYSKNQLKEMREIAN 391
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 25.4 bits (53), Expect = 8.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 261 IVREMNGKFKVFYIWT*SGL*RKV 190
IV+ +NG+F + IW GL RK+
Sbjct: 544 IVKYLNGRFALQTIWVAEGLPRKL 567
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 8.7
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -2
Query: 598 YRDCLNLLRYRTMKLKELPSADYDKLYQDGHTDVYKMKLYLICLILHNKLK 446
Y D L L Y P A+Y L+ + D K L +ICL+L K+K
Sbjct: 68 YYDLLRLFEYGGFP----PEANY--LFLGDYVDRGKQSLEVICLLLAYKIK 112
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 25.4 bits (53), Expect = 8.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 307 FQIECFNGCKMFIEDYCER 251
F+I NG K+ + YCER
Sbjct: 705 FEITMTNGMKLVFQSYCER 723
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,097,220
Number of Sequences: 5004
Number of extensions: 65411
Number of successful extensions: 180
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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