Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a13f
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7796 Cluster: PREDICTED: hypothetical protein;...    41   0.028
UniRef50_UPI00006D0060 Cluster: hypothetical protein TTHERM_0077...    37   0.46 
UniRef50_Q0U7I9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_Q93YQ7 Cluster: Endoglucanase 24 precursor; n=47; Sperm...    34   3.2  
UniRef50_UPI0000E4A783 Cluster: PREDICTED: similar to laminin ga...    33   5.7  
UniRef50_Q15645 Cluster: Thyroid receptor-interacting protein 13...    33   5.7  
UniRef50_Q87IZ8 Cluster: Putative uncharacterized protein VPA045...    32   9.9  
UniRef50_A3DCT3 Cluster: Putative uncharacterized protein; n=1; ...    32   9.9  
UniRef50_Q8MLR7 Cluster: CG3530-PA, isoform A; n=9; Eumetazoa|Re...    32   9.9  

>UniRef50_UPI0000DB7796 Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 606

 Score = 40.7 bits (91), Expect = 0.028
 Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
 Frame = +3

Query: 132 EIHRRSITINKIEESTISWQK-NVLAVRHDKGIQMYEFSLNLECIDKNIDCSEIHVPTTK 308
           EI+  +I    I +  + W   N +++  +KGI ++E   +       I  S   + T  
Sbjct: 5   EIYSLTIFPPVISKFAVQWSMDNNISILTEKGIHIFELIPSPISPSSTIKFSRSFIYTPS 64

Query: 309 TSPAEKL---FSGQVFDRYTPNMLYTDMLLEPAMWAHNPTMLDDLVNISHFSWSPVGFIQ 479
           T P E +      ++++ +    LY+  ++E +M      + + +  I   +WSP   I 
Sbjct: 65  TFPTEIISNRIESKIWNMHREE-LYS-FIIEESMTPKLSNVKEMVPKIIDLAWSPKDLIH 122

Query: 480 NNESALAILNNVGQVDIIAPKENR-WVNVFNLS 575
            ++  +AIL + G V IIA K  R W  V++LS
Sbjct: 123 PSKCLIAILTSAGAV-IIACKICRDWYPVYDLS 154


>UniRef50_UPI00006D0060 Cluster: hypothetical protein TTHERM_00773300;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00773300 - Tetrahymena thermophila SB210
          Length = 1870

 Score = 36.7 bits (81), Expect = 0.46
 Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
 Frame = +3

Query: 99   KT*KMNQNILFEIHRRSITI-NKIEESTISWQKNVLAVRHDKGIQ-MYEFSLNLECIDKN 272
            K+ K  QNI+  I  + I I N++ E  +    ++  +      Q +++FS N++C  +N
Sbjct: 1565 KSMKHIQNIIHRIDNKFIVIQNELIEKYMDNVDHITQMLQSLNDQTLFKFSQNIQCFWQN 1624

Query: 273  IDCSEIHVPTTKTSPAEKLFSGQVFDRYTP-NMLYTDMLLE 392
            +   + +  T K    +KLF   +F+R T   +LY  ++ E
Sbjct: 1625 L---QTYRKTIKQETEDKLFKSHIFERTTAGELLYNKIISE 1662


>UniRef50_Q0U7I9 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 590

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 22/89 (24%), Positives = 44/89 (49%)
 Frame = +3

Query: 288 IHVPTTKTSPAEKLFSGQVFDRYTPNMLYTDMLLEPAMWAHNPTMLDDLVNISHFSWSPV 467
           +H     ++ A+  ++  +FD Y P++L+ ++L +P  W H PT+  + +  +     P 
Sbjct: 39  LHHIDPSSNDAKNTYAVALFDSYRPDILFGEVLAKPG-WTH-PTLSQEEIRKNGGVPPPP 96

Query: 468 GFIQNNESALAILNNVGQVDIIAPKENRW 554
             I   E A+ + N   QV I+  +  +W
Sbjct: 97  QPIYPTEFAIQLYNPDTQV-IVKQQTTKW 124


>UniRef50_Q93YQ7 Cluster: Endoglucanase 24 precursor; n=47;
           Spermatophyta|Rep: Endoglucanase 24 precursor -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 497

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 22/85 (25%), Positives = 37/85 (43%)
 Frame = +3

Query: 372 YTDMLLEPAMWAHNPTMLDDLVNISHFSWSPVGFIQNNESALAILNNVGQVDIIAPKENR 551
           + D LL  A W    T  +  +N    +  P G   +N       N VG ++++  KE  
Sbjct: 240 FQDELLWGAAWLRKATGDESYLNYIESNREPFG-ANDNVDEFGWDNKVGGLNVLVSKEVI 298

Query: 552 WVNVFNLSPYLSHSLKIQASMSPQS 626
             N++NL  Y + +     S+ P+S
Sbjct: 299 EGNMYNLEAYKASAESFMCSLVPES 323


>UniRef50_UPI0000E4A783 Cluster: PREDICTED: similar to laminin gamma
           1, partial; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to laminin gamma 1, partial -
           Strongylocentrotus purpuratus
          Length = 1462

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 19/36 (52%), Positives = 20/36 (55%)
 Frame = -2

Query: 447 GLCSPNRLASLGYVPTSPVPKACLYTTYLECTYQTL 340
           GLC P  +ASL YVP SPV  A LY   L   Y  L
Sbjct: 677 GLCEP-LVASLPYVPGSPVTNATLYQFKLHENYWNL 711


>UniRef50_Q15645 Cluster: Thyroid receptor-interacting protein 13;
           n=29; Eukaryota|Rep: Thyroid receptor-interacting
           protein 13 - Homo sapiens (Human)
          Length = 432

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +3

Query: 465 VGFIQNNESALAILNNVGQVDIIAPKENRWVNVFNLSPYLSHSLKIQA 608
           +GFI+NN S L++L N    DI    E     V    P+L+H+L +QA
Sbjct: 359 IGFIENNVSKLSLLLN----DISRKSEGLSGRVLRKLPFLAHALYVQA 402


>UniRef50_Q87IZ8 Cluster: Putative uncharacterized protein VPA0457;
           n=2; Vibrio parahaemolyticus|Rep: Putative
           uncharacterized protein VPA0457 - Vibrio
           parahaemolyticus
          Length = 298

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
 Frame = -2

Query: 411 YVPTSPVPKACLYTTYLE---CTYQTLDQRTAFQQDSSL*LVHEFLNSQYFCRYILN*VR 241
           Y+PT+  P++ + +TY       YQ+L  +  FQQ  S  +  ++LN  +     LN   
Sbjct: 172 YIPTTSEPQSAVRSTYHHFNSANYQSL--KNYFQQHYSSWIEEQYLNWMFELNTQLNHQT 229

Query: 240 IHTFVFLYHDE 208
             T++  Y DE
Sbjct: 230 AATYIIEYEDE 240


>UniRef50_A3DCT3 Cluster: Putative uncharacterized protein; n=1;
           Clostridium thermocellum ATCC 27405|Rep: Putative
           uncharacterized protein - Clostridium thermocellum
           (strain ATCC 27405 / DSM 1237)
          Length = 160

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 213 HDKGIQMYEFSLNLECIDKNIDCSEIHVPTTKTSPAEKL 329
           ++ GIQ  E + +L C D N+ C +IH+P  +    E L
Sbjct: 56  YNLGIQPAEATYDLNCFDFNVYCVKIHIPLNQQLNCEVL 94


>UniRef50_Q8MLR7 Cluster: CG3530-PA, isoform A; n=9; Eumetazoa|Rep:
           CG3530-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 761

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 16/57 (28%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
 Frame = -2

Query: 414 GYVPTSPVPKACLYTTYLECTYQTLDQRT-AFQ-QDSSL*LVHEFLNSQYFCRYILN 250
           G++ T     + ++T +L+CT+Q + QR+ AF+  +  L ++H+ ++S  F  ++ N
Sbjct: 454 GHIQTDAREVSPIFTQFLDCTWQLMSQRSEAFEFNERFLLILHDHVHSCQFGTFVGN 510


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,195,265
Number of Sequences: 1657284
Number of extensions: 12198950
Number of successful extensions: 29889
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29877
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)