Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a13f
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.1  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.1  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      23   2.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.8  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.9  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.5  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 333 RTAFQQDSSL*LVHEFLNSQYFCR 262
           RTA+     + L  EF  S+Y CR
Sbjct: 89  RTAYTSSQLVELEREFHRSKYLCR 112


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 333 RTAFQQDSSL*LVHEFLNSQYFCR 262
           RTA+     + L  EF  S+Y CR
Sbjct: 109 RTAYTSSQLVELEREFHRSKYLCR 132


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -1

Query: 487 SLFCMKPTGDQEKWLMFTKSSSIVGLCAHIAGSKSMSV 374
           SLFC K    + K++  T  + +  +C    G +  +V
Sbjct: 101 SLFCPKAKPGERKFIKVTTKAPLECMCRPCTGVEESAV 138


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 574 ERLNTLTHLFSLGAIISTWPTLFKIAK 494
           ++LNTLT +F L A+   W + +  AK
Sbjct: 134 KKLNTLTVVFMLIALGEHWLSRYSWAK 160


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 574 ERLNTLTHLFSLGAIISTWPTLFKIAK 494
           ++LNTLT +F L A+   W + +  AK
Sbjct: 134 KKLNTLTVVFMLIALGEHWLSRYSWAK 160


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 586 LKYGERLNTLTHLFSLGAIISTWPTLFK 503
           L++G    T+  +FS G I+  + ++F+
Sbjct: 380 LRFGAESQTINFMFSFGFILLRFLSVFE 407


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 444 SHFSWSPVG-FIQNNESALAILNNVGQVDIIAPKENRWVNVFNLSPYLSH 590
           S+   SPV  FIQ     +  + N+  + I A K+ +W ++  +   +S+
Sbjct: 338 SYEKLSPVVLFIQVAADTVLFILNISTIIITARKKQQWNSLIKILKTVSN 387


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 333 RTAFQQDSSL*LVHEFLNSQYFCR 262
           RTA+     L L  EF  ++Y CR
Sbjct: 8   RTAYTNTQLLELEKEFHFNKYLCR 31


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 333 RTAFQQDSSL*LVHEFLNSQYFCR 262
           RTA+     L L  EF  ++Y CR
Sbjct: 139 RTAYTNTQLLELEKEFHFNKYLCR 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,938
Number of Sequences: 336
Number of extensions: 3432
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)