Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a13f
         (631 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   2.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.5  
CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply, Sphingosine...    23   8.0  
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    23   8.0  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 438 NISHFSWSPVGFIQNN 485
           N+SH  W+P+  IQ N
Sbjct: 135 NVSHTLWNPIEVIQTN 150


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 576  PYLSHSLKIQASMSPQ 623
            P+LSHS+ +QAS+  Q
Sbjct: 3107 PHLSHSVSLQASVKTQ 3122


>CR954257-10|CAJ14161.1|  519|Anopheles gambiae Sply,
           Sphingosine-phosphate lyase protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +3

Query: 321 EKLFSGQVFDRYTPNMLYTDMLLEPAMWAHNPTMLDDLVNISHFSWSPVGFI 476
           EK+ +G + D       YT++  +    A     +D+ +++ H+ W   GFI
Sbjct: 75  EKINAGFIKDISQTGNYYTELPHDSMGQAEILKKVDEYLDLGHYRWKE-GFI 125


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 333 RTAFQQDSSL*LVHEFLNSQYFCR 262
           RTAF     + L  EF +++Y CR
Sbjct: 4   RTAFTSSQLVELEKEFHSNRYLCR 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,246
Number of Sequences: 2352
Number of extensions: 13311
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)