Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a11r
(726 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 33 0.055
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip... 31 0.13
SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 30 0.29
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 29 0.51
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.68
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 29 0.89
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 29 0.89
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 28 1.6
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p... 27 2.1
SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyce... 27 2.7
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 27 3.6
SPAP27G11.07c |||serine/threonine protein kinase |Schizosaccharo... 26 4.8
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 26 6.3
SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit ... 26 6.3
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 26 6.3
SPCC4B3.18 |||phosphopantothenate-cysteine ligase|Schizosaccharo... 25 8.3
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 32.7 bits (71), Expect = 0.055
Identities = 26/110 (23%), Positives = 43/110 (39%)
Frame = -1
Query: 678 YASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKL 499
Y G + + P HN+ ++ LK SSNY EKL K RE +
Sbjct: 155 YEPGTRENPAVPFLPPLYTHNHDPVDHKSLKNFYSSNYFAEKLIDQLK--NREKSQSFFA 212
Query: 498 ECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEEL 349
QS + +N +++ +L +NR ++ L+PE +
Sbjct: 213 YLPFTAPHWPLQSPKEYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENV 262
>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
antiporter Sod22|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 31.5 bits (68), Expect = 0.13
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 284 ILLLRTFKPWGIMWTEL*PVFREHLGPISISALYS 180
+LL ++F P I W E +F H GPI + ALY+
Sbjct: 345 VLLFKSFVPDIINWREA--LFAGHFGPIGVGALYT 377
>SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 314
Score = 30.3 bits (65), Expect = 0.29
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = -1
Query: 597 EDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETE--EW 424
E+ K RN + S K + S+ L K KK T+L TE +
Sbjct: 187 EETKDRNLDRALSKFTQSREKNEQNLSSKASVLRNKKSILLKKRNQDETQLTTEEDFSAN 246
Query: 423 NDSSHLLWQNRNSNKRHANLMPEELPFTN 337
NDS+ + + + ++ + + P ELPF N
Sbjct: 247 NDSTAKIETSIHDHRDISRITPFELPFVN 275
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 29.5 bits (63), Expect = 0.51
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -1
Query: 591 LKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDS 415
+K R Y++E+LP + TS +S E + T K+ SK TK E EW DS
Sbjct: 93 IKDRIPVYYEEEELPEPHVTSPTKS------EFATTSTCMKWSSKTTKSEIEV-EWRDS 144
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.68
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = -1
Query: 660 PGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKE 481
P D + + +E TS K E + + K +N + ++ES K KLE +++
Sbjct: 123 PKDILKVKEKSEKPLETSQKVEIETVETKPGEPEVKQETNLQKEKKES--KVKLESKEEK 180
Query: 480 TSKKFQSKRTKLNTETEE 427
S+ +S ++ TE+
Sbjct: 181 ISRNLRSSSRSISPVTEQ 198
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 28.7 bits (61), Expect = 0.89
Identities = 24/113 (21%), Positives = 52/113 (46%)
Frame = -1
Query: 573 SNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQN 394
S+ +K ++ K+ R +S ++ S + S + + ++ + E+ N +S + +
Sbjct: 95 SDRSSQKSSNSRKSIRSQSRSRSSSVGSDSQASIQSGTNSEVVSDDEEDGNFAS--IPEL 152
Query: 393 RNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRT 235
N+ H+NL PF++ S++ AS S S V+ + + N+ T
Sbjct: 153 HEDNEYHSNLATSSNPFSDGSSSKSASLTASSAAASPTVSFSPASTSENLTPT 205
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.7 bits (61), Expect = 0.89
Identities = 27/135 (20%), Positives = 50/135 (37%)
Frame = -1
Query: 615 YTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTE 436
Y + E K +Y+ + + S + TK + SKK++SK K +K +
Sbjct: 157 YKTEYSETTKFPLGKSYRPKASRTTSSQSVASTMTKSSTKTSKKKSSK----KNSKSESN 212
Query: 435 TEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTM 256
+ ND S SN H + + +++ Q + + ++
Sbjct: 213 QDSSNDRSSTAPSTAESNNEHLSSSQKSKHSIVFMAEQTSHHPAVSAFYVTCPSKGIEVY 272
Query: 255 GHNVDRTLASFSGTS 211
G D+ F+GTS
Sbjct: 273 GQ--DQIAVGFTGTS 285
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -3
Query: 217 NISGQFQSQHYIP*NNHEGPVVINEKRQNSNYYYNNITFVLHTMK 83
N S S+H I NNH G +++ + +S+ NN+ + +K
Sbjct: 695 NDSSSSSSEHLISFNNHTGNKILSRQTTSSSIDSNNVQSNIEFLK 739
>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = -1
Query: 576 SSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLN 442
SS + + S ++S+RE + K K + KK+ KK +SKR KL+
Sbjct: 124 SSKKVKVRKTSGKESSKREKSKKKKEKKEKKDKLKK-KSKRLKLD 167
>SPCC1620.05 |||Rab geranylgeranyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = -1
Query: 585 MRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHL 406
+R + +Q KL + + ++ E + K + KL TE +WN ++
Sbjct: 5 LRVKLSEEQRKLKAEKERAKIEEYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNPETYS 64
Query: 405 LWQNR 391
+W R
Sbjct: 65 VWNYR 69
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -1
Query: 570 NYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETE 430
NY Q KLP N TKH L ++ +K + KL TE
Sbjct: 381 NYNQVKLPFNVDFGSSLKVTKHPLSLTRFNV-RKLLASENKLAVLTE 426
>SPAP27G11.07c |||serine/threonine protein kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 238
Score = 26.2 bits (55), Expect = 4.8
Identities = 8/35 (22%), Positives = 20/35 (57%)
Frame = -1
Query: 351 LPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHN 247
+P + +++A ++++ ++ L TSN+ HN
Sbjct: 126 IPLMKRIGSEVAKMHKNDIVHGDLTTSNMMLESHN 160
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/71 (16%), Positives = 40/71 (56%)
Frame = -1
Query: 615 YTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTE 436
+ SH+ D + +SSN ++E++ + ++ S++ ++ S++ S++ +R ++ +
Sbjct: 147 FNSHELSDEENSDSSNEREEEVEDDNRSVESYSSSDYQAR-SRRRFSEETTQRRAEIKEK 205
Query: 435 TEEWNDSSHLL 403
++ + + +L
Sbjct: 206 RKKRKEFASIL 216
>SPBC119.01 |rpn3|SPBPJ4664.07|19S proteasome regulatory subunit
Rpn3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 497
Score = 25.8 bits (54), Expect = 6.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 222 SGTSRANFNLSTIFPEITMKVQ 157
S TS N N +TIFPE+ M +Q
Sbjct: 109 SSTSITNGNGNTIFPEVDMYLQ 130
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = -1
Query: 480 TSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ 322
+S+ F+ + N E S HL + +RN NKR + P+ + Y S +
Sbjct: 284 SSELFRKRSRDNNLSRESSVSSKHLDYNSRNYNKRDRD--PDRTKYREYHSER 334
>SPCC4B3.18 |||phosphopantothenate-cysteine
ligase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 316
Score = 25.4 bits (53), Expect = 8.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 360 ALNSHVFCWNFYSATINERNHSILPF 437
A ++ FC + YS RN+S++PF
Sbjct: 70 AASAEYFCKSGYSVIFLYRNYSLMPF 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,027,168
Number of Sequences: 5004
Number of extensions: 65184
Number of successful extensions: 218
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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