Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a11r
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 37 0.014
SB_2237| Best HMM Match : Vicilin_N (HMM E-Value=2.5) 35 0.058
SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_67| Best HMM Match : Ribosomal_S13_N (HMM E-Value=5.2) 33 0.18
SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 32 0.41
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0) 32 0.54
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 31 0.72
SB_40942| Best HMM Match : 7tm_1 (HMM E-Value=1.4013e-45) 31 0.95
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 31 0.95
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18) 30 1.7
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 30 1.7
SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_51014| Best HMM Match : DUF963 (HMM E-Value=4.7e-07) 30 2.2
SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 2.2
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 29 3.8
SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4) 29 3.8
SB_44100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0) 29 5.1
SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9) 28 6.7
SB_43321| Best HMM Match : Laminin_A (HMM E-Value=0.76) 28 6.7
SB_29860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 28 6.7
SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43) 28 6.7
SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_47440| Best HMM Match : SURF6 (HMM E-Value=0.96) 28 8.9
SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07) 28 8.9
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 37.1 bits (82), Expect = 0.014
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = -1
Query: 639 NQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSK-KFQ 463
N+ TE S + E KM+NS + + +L S +E TK K S+K + K ++
Sbjct: 1020 NERTELEK--SFRQERTKMKNSHDKEMVQLESREDQLTKEMDTKLKKLTSEKNSIKAEYV 1077
Query: 462 SKRTKLNTETEEWNDSSHLLWQN 394
SK +L +E EE N S L +N
Sbjct: 1078 SKIARLQSELEESNQRSRLDIEN 1100
>SB_2237| Best HMM Match : Vicilin_N (HMM E-Value=2.5)
Length = 127
Score = 35.1 bits (77), Expect = 0.058
Identities = 23/99 (23%), Positives = 44/99 (44%)
Frame = -1
Query: 618 NYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNT 439
NY S++ E++ R + ++ K P ++ T++ ++KE K RT T
Sbjct: 25 NYGSNRKEEIPKRTMAPTERRKYPKELWLQQKGGNTQNNYGSNRKEEIPK----RTMAPT 80
Query: 438 ETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ 322
E ++ L + N+ K + + EE+P T V +
Sbjct: 81 ERRKYPKELWLQQKGGNTQKNYGSNRKEEIPKTTIVPTE 119
>SB_33134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2208
Score = 33.9 bits (74), Expect = 0.13
Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Frame = -1
Query: 609 SHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETE 430
+H+ + K+ + + + R++ + ++ K + SKK QSK +L TE
Sbjct: 1062 THEAANSKLSEDNERLTNNAAAKAQNIERDAIIQQLMD-EKSQMSKKLQSKEDELATEKA 1120
Query: 429 EWNDSSHLLWQNRNSNKR-HANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTM 256
+ L R K H N+ E T A S + H + N+Q +
Sbjct: 1121 NSQKHTETLSSQRAKEKELHTNIKELEAKITTLTEESQAKLKASSY-EKHQLVKNIQLL 1178
>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/101 (23%), Positives = 46/101 (45%)
Frame = -1
Query: 492 SKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMAS 313
S +E + +S+ LN E NDS + + + + K NL+ E N
Sbjct: 159 SSEEEDGEIESEDNSLNNSHSE-NDSKNRVSEKKYEEKTGENLVTETYQEQKSYQNSDYE 217
Query: 312 QYQSEFLNSHLVTSNVQTMGHNVDRTLASFSGTSRANFNLS 190
+ +S+ + +S + + N D + +F+G+SR ++LS
Sbjct: 218 RQKSDRERTEAESSQITS--RNTDESKETFAGSSRLPYDLS 256
>SB_67| Best HMM Match : Ribosomal_S13_N (HMM E-Value=5.2)
Length = 243
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Frame = -1
Query: 582 RNSSNYQQEKLPS-NYKTSRRESATKHKL-----ECSKKETSKKFQSKRT-KLNTET-EE 427
R E++P N + RR+ K + S KE ++K +R +L E +
Sbjct: 122 RRKGELMPERMPDWNKMSDRRKGELMPKRMPDWNKMSDKEIAEKMSDRRKGELMPERMPD 181
Query: 426 WNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSE 298
WN S R ++R LMPE +P N +S++ + E
Sbjct: 182 WNKMSDRRKDERQRDRRKGELMPERMPDWNKMSDRRKGELMPE 224
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Frame = -1
Query: 582 RNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTK--LNTETEEWNDSSH 409
R E++P K S R K +L + K +R + +WN S
Sbjct: 103 RRKGELMPERMPDWNKMSDRR---KGELMPERMPDWNKMSDRRKGELMPKRMPDWNKMSD 159
Query: 408 LLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDR 238
+ S++R LMPE +P N +S++ + Q + L+ + DR
Sbjct: 160 KEIAEKMSDRRKGELMPERMPDWNKMSDRRKDERQRDRRKGELMPERMPDWNKMSDR 216
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -1
Query: 459 KRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSE 298
K+ + +WN S + S++R LMPE +P N +S++ + E
Sbjct: 20 KKALMPEHMPDWNKMSDKEIVEKMSDRRKGELMPERMPDWNKMSDRRKGELMPE 73
>SB_10204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 32.7 bits (71), Expect = 0.31
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 8/182 (4%)
Frame = -1
Query: 708 QNSGNLMTGNY---ASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNY 538
+N N T NY A+ + I+ T NY++ E+ + + NY K NY
Sbjct: 129 ENYSNKATENYSNKATENYSTKAIENYSTTAIENYSTKATENYSTKATENY-STKATENY 187
Query: 537 KTSRRESATKHKLECSKKETSKKFQSKRTK-LNTE-TEEWNDSSHLLWQNRN-SNKRHAN 367
T E+ + E + ++ + +K T+ +T+ TE ++ + + N S K N
Sbjct: 188 STKATENYSTKAAENYSTKATENYSTKATENYSTKATENYSTKATENYTTENYSTKATEN 247
Query: 366 LMPEELPFTNYVSNQMASQYQSEFLNSH--LVTSNVQTMGHNVDRTLASFSGTSRANFNL 193
+ + NY S + Y ++ + ++ T N T A+ + +++A N
Sbjct: 248 YSTKAI--ENY-STKATENYSTKAIKNYSTKATKNYSTKATENYSNKATKNYSTKATENY 304
Query: 192 ST 187
ST
Sbjct: 305 ST 306
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 32.3 bits (70), Expect = 0.41
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = -1
Query: 597 EDLKMRNSSNYQQEKLPS------NYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTE 436
E+ K RN+ Q++KLP + K +R E+ + + + + +E + K+ +
Sbjct: 73 EEGKNRNTRRRQEQKLPEEGKNKKHQKRARTETTRRGQEQKTPEEGKNRNHQKKARTENT 132
Query: 435 TEEWNDSSHLLWQNRNSNKRHANLMPEE 352
+ +NRN+ KR PEE
Sbjct: 133 RRRQGEKPPEEGKNRNTRKRQEQKTPEE 160
>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 808
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Frame = -1
Query: 588 KMRNSSNYQQEKLPSNYKTSRRESATK--HKLECSKKETSKKFQSKRTKLNTETEEWNDS 415
K N + +K+ NY+ +ES K +L+ +K K FQS + + ++ D
Sbjct: 537 KSVNGLEKEIKKMEQNYELKSKESDEKFHRELQNTKDRLQKDFQSFHQRTSENSQSMQDR 596
Query: 414 SHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTS 271
L + RNS + + + EL + +++ +++ LV S
Sbjct: 597 ILKLEEERNSLEVEVSRLRSELVSSKLKADEDLMNAKTKLKQEELVRS 644
>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
Length = 2376
Score = 31.9 bits (69), Expect = 0.54
Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Frame = -1
Query: 651 FIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSR---RESATKHKLECSKKE 481
F+ PT HN ++Y + + SN L R S +++ CSK +
Sbjct: 1921 FVPSADPTSIHNLWRYRYHTICTKRQSNQYSRPLAGECDIVRLVDLSSCSEYVSHCSKHQ 1980
Query: 480 TSKKFQSKR-TKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVS--NQMASQ 310
+ ++ T L+ T + S + Q+R+ H + P++ T S M
Sbjct: 1981 PIGESDPRQATPLHAPTPRLDMSRSGIGQSRSEMGLHTSKQPQKQTKTRTKSAVKFMGET 2040
Query: 309 YQSEFLNSHLVT---SNVQTMGHNVDRTL 232
+++ + ++T ++V G +VD+ L
Sbjct: 2041 HKAPVIKGSVITPGRAHVTHTGSDVDQGL 2069
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 31.5 bits (68), Expect = 0.72
Identities = 21/91 (23%), Positives = 43/91 (47%)
Frame = -1
Query: 639 NQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQS 460
++P++ ++ + YE + S Y++ + +R+ +HK K+ +K S
Sbjct: 1378 DEPSDGYHGDNKDYEGWRSPRSG-YRRSGISGESHENRKNKKKEHK----KRMHAKIKHS 1432
Query: 459 KRTKLNTETEEWNDSSHLLWQNRNSNKRHAN 367
KR + +W D + L + N+N+N H N
Sbjct: 1433 KRMFEVPDQLDWRDYALLRYVNKNNNDTHYN 1463
>SB_40942| Best HMM Match : 7tm_1 (HMM E-Value=1.4013e-45)
Length = 358
Score = 31.1 bits (67), Expect = 0.95
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = -1
Query: 516 ATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTN 337
A KH L C+ T + +++ E S+ + RNS ++ + EL +
Sbjct: 285 AFKHILCCNLVATGRAMDQFIARVSGEASNGVSSNEMALAMRNSGQQQIS----ELRCAS 340
Query: 336 YVSNQMASQYQSEFLNS 286
Y+SNQM S Q + N+
Sbjct: 341 YMSNQMTSDKQCKLTNA 357
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 31.1 bits (67), Expect = 0.95
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -1
Query: 561 QEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLL 403
QEKL K S + KLE KE K +++L E ++HLL
Sbjct: 736 QEKLEGVSKASEQSKTHAQKLESLNKEQENKLVDAQSRLEESEAEGRKTAHLL 788
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 30.7 bits (66), Expect = 1.3
Identities = 33/149 (22%), Positives = 61/149 (40%)
Frame = -1
Query: 633 PTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKR 454
P+E Y++ E+ + + NY K NY T E+ + E + ++K+ +K
Sbjct: 8 PSEYITYSTKATENYSTKATENY-STKASENYSTKATENYSTKASENYSTKATEKYSTKA 66
Query: 453 TKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVT 274
+ N T+ + S +N S K N + T S + Y ++ + + T
Sbjct: 67 AE-NYSTKATENYSTKATEN-YSTKAAENYSTKA---TENYSTKATENYSTK-ASENYTT 120
Query: 273 SNVQTMGHNVDRTLASFSGTSRANFNLST 187
N T T A+ + +++A N ST
Sbjct: 121 ENYSTKAAEKYSTKATENYSTKATENYST 149
>SB_26831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 932
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = -1
Query: 525 RESATKHKLECSKKETSKKFQSKRTKLNTET--EEWNDSSHLLWQNRNSNKRHANLMPEE 352
++ T K + +K E+ + K T+ E+ DS L+ + + K+ ANL EE
Sbjct: 264 KKQLTDVKNQLAKSESQLQAAEKDLAFKTQELKEKVQDSEELIKASNENIKKAANLS-EE 322
Query: 351 LPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRTL 232
L T + +Q+ +Q +S + + HN D +
Sbjct: 323 LMKTKSLLDQVKAQLESSEAKCKQLGKEMDCQKHNFDSVI 362
>SB_49251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1560
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1
Query: 549 PSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHA 370
P+ S ++ K + KKE K Q K+T LNT E+ DS L +R+S+ + +
Sbjct: 722 PATPSLSVLKAGMKVTFDDKKKEDDSKKQ-KKTDLNTVLEDDEDSVSLSSSHRSSSSQSS 780
Query: 369 NLMP 358
+ +P
Sbjct: 781 SPVP 784
>SB_32678| Best HMM Match : HEAT (HMM E-Value=9.6e-18)
Length = 844
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 621 HNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETS-KKFQSKRTKL 445
H++ Y +LK+R SS+Y + L T + +L K ++S +KF S
Sbjct: 543 HDFDYDDYHELKLRRSSSYDDDLLLDGMVTPHQIGVLLRRLHGCKDDSSVRKFVSDIIIK 602
Query: 444 NTETEEW 424
+++W
Sbjct: 603 FAHSQQW 609
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/128 (21%), Positives = 55/128 (42%)
Frame = -1
Query: 579 NSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLW 400
NS N + L S+ S ++ + S + K S KLN+ + N+S+
Sbjct: 19 NSDNLNSDNLNSDKLKSDNSNSDNSNSDNSNSDKLKSDNSNSEKLNSNNSDSNNSNSDNS 78
Query: 399 QNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRTLASFS 220
+ NSN ++N ++L N + S + + +NS+ + + + N D + + S
Sbjct: 79 NSDNSNSDNSN--SDKLKLVNSNPDNSNSD-KLKLVNSN--SDKLNSDNSNSDNSNSDNS 133
Query: 219 GTSRANFN 196
+ +N N
Sbjct: 134 NSDNSNSN 141
>SB_5248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1311
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = -1
Query: 576 SSNYQQEKLPSN--YKTSRRESATKHKLECSKKETSKKFQ-SKRTKLNTETEEWNDSSHL 406
SSN + E P N + + S+ K KL+ KE K Q S R K N E + SH
Sbjct: 977 SSNSRIEDNPCNEGIDNNGKISSGKSKLKRISKEDGKHSQMSHRHKENNGKSEVDTDSHK 1036
Query: 405 LWQNRNSNKRHANLMPEELP 346
NR+ +++H E+ P
Sbjct: 1037 EDINRDRDRQHRRSKAEKKP 1056
>SB_51014| Best HMM Match : DUF963 (HMM E-Value=4.7e-07)
Length = 206
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = -1
Query: 546 SNYKTSRRESATKH-KLECSKKETSKKF-QSKRTKLNTETEEWNDSSHLLWQNRNSNKRH 373
+N K++ +AT++ + + T+ ++ +K T LNT TE N S LL +
Sbjct: 89 TNTKSTLLNTATEYTNTKSTLLNTATEYTNTKSTLLNTATEYTNTKSTLLNTATDYTNTE 148
Query: 372 ANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRTLASFS 220
+ L+ +TN S + + +E+ N+ N+ T N TL + +
Sbjct: 149 STLLNTATEYTNTKSTLLNT--ATEYTNTKSTLMNIVTEYTNTKITLMNIA 197
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/77 (29%), Positives = 31/77 (40%)
Frame = -1
Query: 462 SKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSH 283
+K T LNT TE N S LL + LM +TN S + +E+ N+
Sbjct: 7 TKSTLLNTATEYTNTKSTLLNTATEYTNTKSTLMNIATEYTNTKSTLL--NIATEYTNTK 64
Query: 282 LVTSNVQTMGHNVDRTL 232
N+ T N TL
Sbjct: 65 STLMNIATEYTNTKITL 81
>SB_26060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2671
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 531 SRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSS 412
S +ES+T K +CSK++ S K +K L + +W DS+
Sbjct: 528 SSKESSTSCK-KCSKEQMSNKENTKCVDLPLQNIQWEDST 566
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = -1
Query: 597 EDLKMRNSSNYQQEKLPSN------YKTSRRESATKHKLECSKKETSKKFQSKRTKLNTE 436
EDLK R +QEK + Y+ +++S + +L S+ E + F+SK + E
Sbjct: 3600 EDLKHRLLRETEQEKKLHDGLKKDLYEAEKQKSDLQRELNQSRYEI-ESFKSKVELIEIE 3658
Query: 435 TEEWNDSSHLLWQNRNSNKRHANLMPEEL 349
+W + L + N + + EEL
Sbjct: 3659 NRKWEEERRKLKEEANYANKELRSIQEEL 3687
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.9 bits (64), Expect = 2.2
Identities = 31/128 (24%), Positives = 58/128 (45%)
Frame = -1
Query: 618 NYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNT 439
N + + E +++ S+NY K Y+T + L S++E SKK+ K
Sbjct: 1278 NELAEQAERIRVFESNNYGDAK--ELYETCNKLENEIGTLRESREELSKKYTQSVAK--- 1332
Query: 438 ETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQT 259
E E +HL+ + SNK+ L+ EE+ + + + ++ QSE + +
Sbjct: 1333 EKE----LTHLV-ETLRSNKKQLELLVEEMKNESMLVEEQLNESQSEL---ETTRESCTS 1384
Query: 258 MGHNVDRT 235
M +++RT
Sbjct: 1385 MNSDLERT 1392
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 29.5 bits (63), Expect = 2.9
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -1
Query: 657 GDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATK-HKLECSKKE 481
G +I T NY+ Y R SS + +N SRR ++ K K + S
Sbjct: 379 GSYITIRNWTRWSNYSGGGYSISNSRPSSRRNPRETKTNTPRSRRSNSRKTPKSKKSNLS 438
Query: 480 TSKKFQSKRTK 448
T+ QS+R+K
Sbjct: 439 TAASDQSERSK 449
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -1
Query: 504 KLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKR 376
K+E K++ + ++++ KLNT EE +D+ L + SN++
Sbjct: 1475 KIEAEKEQLLSELKTQKEKLNTVIEELDDTKSTLEIIKESNEK 1517
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -1
Query: 510 KHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYV 331
K KLE + K + K K++ E + D++ L +++S N M E+ +
Sbjct: 1206 KQKLE----QEMKAMEGKIKKMDAELQSVKDANRNLTSSKDSMLAEKNAMKSEIMRWSTK 1261
Query: 330 SNQMASQYQS 301
+NQ+ QY++
Sbjct: 1262 TNQLMEQYRN 1271
>SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)
Length = 573
Score = 29.1 bits (62), Expect = 3.8
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 10/98 (10%)
Frame = -1
Query: 621 HNYTSHKYEDLKMRNSSNYQQEKLPS-----NYKTSRRESATKHKLECSKKETSKKFQ-- 463
H E+L ++ + ++PS N +T R +A K++ K+ T +
Sbjct: 321 HQKVDPSQEELVAKSVTKPGTARMPSTARQRNQQTQSRATAGGIKMDTPKENTPAVMEQP 380
Query: 462 SK---RTKLNTETEEWNDSSHLLWQNRNSNKRHANLMP 358
SK R K+NT+ E+ + L QN + +H NL P
Sbjct: 381 SKTLAREKVNTQKEKQQNHVFLEAQNADWAAKHENLSP 418
>SB_44100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 341
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -1
Query: 708 QNSGNLMTGNYASGPFPGD--FIDYNQPTECHNYTSH 604
+++ N+ T S P D F YNQ TE HN+T++
Sbjct: 250 ESTTNVATNTTTSLKLPEDIEFCIYNQETELHNFTAY 286
>SB_41617| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 675
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/62 (22%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -1
Query: 432 EEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ-MASQYQSEFLNSHLVTSNVQTM 256
E W H + + R +RH L+P ++ + +Y+SN+ + + + + + L + ++ +
Sbjct: 523 ETWTVYQHEVRELRTLQQRHLRLIP-QIKWDDYISNEDVLRRANVDDIETKLARNRLRWL 581
Query: 255 GH 250
GH
Sbjct: 582 GH 583
>SB_52226| Best HMM Match : Cytadhesin_P30 (HMM E-Value=9)
Length = 264
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -1
Query: 687 TGNYASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQ 562
T N PFPG+ Y QPT T Y + R + YQ
Sbjct: 182 TNNPMFRPFPGNPQGYQQPTTNQLPTDQAYRYRRPRGGARYQ 223
>SB_43321| Best HMM Match : Laminin_A (HMM E-Value=0.76)
Length = 353
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 459 KRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ 322
K+ + +WN S + S++R LMPE +P N +S +
Sbjct: 145 KKALMPEHMPDWNKMSDKEIVEKMSDRRKGELMPERMPDWNKISEK 190
>SB_29860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -1
Query: 540 YKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSS 412
++ RR+++ KH E +K+E F++ T+L+T+ + + S
Sbjct: 21 HQNHRRKNSEKHTQEENKRERGGYFETLVTRLHTQVDSQQNRS 63
>SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2806
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -1
Query: 537 KTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMP 358
K RES ++L ++ K RTK+N ++ ND+ + + K++ +P
Sbjct: 1272 KRLNRESVASYELNVVVQDKRTKRTLDRTKVNITVDDSNDNRPIFLK-----KKYLKTIP 1326
Query: 357 EELP 346
E++P
Sbjct: 1327 EDIP 1330
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -1
Query: 726 FYSNFMQNSGNLMTGNYASGPFPGDFIDYNQPTECHNYTSHKY 598
+Y+ GN GNYA G + G +C NYT Y
Sbjct: 641 YYAGGYYTDGNYTDGNYAGGNYAGGNYAGGNYADC-NYTGGNY 682
>SB_46755| Best HMM Match : zf-C2H2 (HMM E-Value=1.09301e-43)
Length = 1806
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = -1
Query: 417 SSHLLWQNRNSNK-RH----ANLMPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMG 253
SS+ NRN + RH L ++P + V+NQMAS + ++ + T
Sbjct: 1693 SSYSFTTNRNHTQGRHPCAQGPLSTGQIPLSVSVTNQMASPDSCMYSSNATPYMSYNTNA 1752
Query: 252 HNVDRTLASFSGTSRA 205
+ DR L SGT A
Sbjct: 1753 YTQDRPLMPHSGTGLA 1768
>SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = -1
Query: 606 HKYEDLKMRNSSNYQQEKLPSNYKTSRRESATK--HKLECSKKETSKKFQSKRTKLNTET 433
H+ ++ RN + Q + + K +S+ K H L KK++ SK N +
Sbjct: 147 HRLSKVEFRNPNIEQSSEFMAEIKEEENDSSEKDKHNLGLKKKDSRPSVVSKDHVSNLDN 206
Query: 432 EEWNDSSH 409
ND H
Sbjct: 207 GRDNDQVH 214
>SB_47440| Best HMM Match : SURF6 (HMM E-Value=0.96)
Length = 279
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -1
Query: 531 SRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWN--DSSHLLWQNRNSNKRHANLMP 358
SR+++A K E + + + + K K N+ +E ++ ++NR S KR + +
Sbjct: 6 SRKQAAALKKKEIKRAKRQRLLREKSRKENSSGQEKEILQNTGERFKNRTSKKRVTDKVK 65
Query: 357 EELPFT 340
++LP T
Sbjct: 66 DKLPQT 71
>SB_40593| Best HMM Match : UCH (HMM E-Value=1.4e-07)
Length = 711
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -1
Query: 648 IDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKK 469
+D N+ ECHN + + + L S + ++ + E +KH+++ S + +
Sbjct: 308 VDNNRGVECHNQETVQRKGLTNEESLDCSKKLQDNTAVNDESECFSKHQVQSSGYDCRNE 367
Query: 468 FQSKRTK 448
S+ TK
Sbjct: 368 QCSENTK 374
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,464,610
Number of Sequences: 59808
Number of extensions: 438195
Number of successful extensions: 1447
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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