Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a11r
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.2  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 6/85 (7%)
 Frame = -1

Query: 690  MTGNYASGPFPGDFIDYNQPTECHNYTSHKY------EDLKMRNSSNYQQEKLPSNYKTS 529
            +TG   SGP    F +Y+Q  + H      Y      E    R   NY  +    +  +S
Sbjct: 1866 LTGMNCSGPAQAYFTEYHQKAQQHCVKPQYYFGNVISEQEAGRQRYNYYYKDFDLSDSSS 1925

Query: 528  RRESATKHKLECSKKETSKKFQSKR 454
               S++  + + S   +S++ +  R
Sbjct: 1926 SESSSSSDESDDSNSSSSEERKPNR 1950



 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -1

Query: 663  FPGDFIDY-NQPTECHNYTSHKYEDLKMRNSSNYQQ 559
            +P  F DY +Q  + H Y +  YE    +N   +Q+
Sbjct: 977  YPHLFKDYFSQYNKNHKYQNDYYEQFGNKNQEEFQK 1012


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,783
Number of Sequences: 2352
Number of extensions: 15059
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)