Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a11r
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z75543-2|CAA99870.1| 529|Caenorhabditis elegans Hypothetical pr... 35 0.068
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 34 0.12
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 34 0.12
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 34 0.12
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 33 0.16
Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 33 0.27
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 33 0.27
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 32 0.36
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 30 1.5
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 29 4.5
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 29 4.5
AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical ... 29 4.5
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 29 4.5
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 28 5.9
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 28 5.9
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 28 5.9
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 28 5.9
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 8/128 (6%)
Frame = -1
Query: 594 DLKMRN--SSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWN 421
+ K+ N +N + + + ++ T + + K KL KKE SK F K + N E+ +
Sbjct: 284 EFKLENFEQTNGEAQSVENDILTGKEKRRLKDKLRKEKKEQSKLFVEKDLEKNKESSSAS 343
Query: 420 DSSHLLWQN-----RNSNKRHANLMPEELPF-TNYVSNQMASQYQSEFLNSHLVTSNVQT 259
S++ L ++ +NSN H N+ P+++ T Y +N ++ +SE + S VT+
Sbjct: 344 LSTNKLAESPTEADKNSNVIHTNIKPKDICIETEYPANN-DNKKKSEVMFSSTVTN---V 399
Query: 258 MGHNVDRT 235
G N ++T
Sbjct: 400 FGRNENQT 407
>Z75543-2|CAA99870.1| 529|Caenorhabditis elegans Hypothetical
protein K01D12.2 protein.
Length = 529
Score = 34.7 bits (76), Expect = 0.068
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Frame = -1
Query: 627 ECHNYTSHKYEDL--KMRNS---SNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQ 463
E H Y+++ YE L +++NS +N Q E++ + KT+ +H L+ + TS +
Sbjct: 239 EAHQYSNYNYESLQPELKNSVTGNNVQLEEIHHSSKTTHHPLRVQHHLQQNSVHTSIAER 298
Query: 462 SKRTKLNTETEEWN-DSSHLLWQNRNSNKRHANLMP-EELPFTN 337
+ + L T E + SS + N N++ A + P E+P N
Sbjct: 299 TDQQPLVEPTSEIHLASSTAVEIKTNLNEKTAKVPPIVEIPKQN 342
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -1
Query: 483 ETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQ 304
+ + +F +K TKL E ++ ND RN+ + + +EL F N + + +YQ
Sbjct: 1405 QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1464
Query: 303 S---EFLNSHLVTSN 268
+ + +SH V+ +
Sbjct: 1465 TTIDDLAHSHRVSED 1479
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -1
Query: 483 ETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQ 304
+ + +F +K TKL E ++ ND RN+ + + +EL F N + + +YQ
Sbjct: 1478 QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1537
Query: 303 S---EFLNSHLVTSN 268
+ + +SH V+ +
Sbjct: 1538 TTIDDLAHSHRVSED 1552
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = -1
Query: 483 ETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQ 304
+ + +F +K TKL E ++ ND RN+ + + +EL F N + + +YQ
Sbjct: 1478 QLASQFDTKLTKLRNELQDTNDKLITSDTERNALRNELQKLSQELKFGNEQIQRKSDEYQ 1537
Query: 303 S---EFLNSHLVTSN 268
+ + +SH V+ +
Sbjct: 1538 TTIDDLAHSHRVSED 1552
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = -1
Query: 603 KYEDLKMRNSSNYQQEKL-PSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEE 427
K + + SS+ +++KL + S+R K + E KKE SK+ + + + E
Sbjct: 59 KRRSAQRKKSSSRRKKKLRKEKSRKSQRSKRKKRESERRKKERSKRIARSKKSIKRDRER 118
Query: 426 WNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQS 301
+DSS + N +N + + +++ +SQ +S
Sbjct: 119 DSDSSRIKKSGSKRNLEKSNRDDSKRKISKDKNSRRSSQEKS 160
>Z68318-4|CAA92693.2| 1170|Caenorhabditis elegans Hypothetical protein
T21B10.3 protein.
Length = 1170
Score = 32.7 bits (71), Expect = 0.27
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = -1
Query: 633 PTECHN-YTSHKYE-DLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQS 460
P E N Y + ++ D+ + S Y QEKL + K R S ++ + + SK +
Sbjct: 967 PRERENVYQNSSHDRDIPRNDYSEYDQEKLYLDDKQPRFHSENRNSNDVRRYSESKDSKY 1026
Query: 459 KRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQ 322
N + W S + +S RH + + + +Y NQ
Sbjct: 1027 DNKNWNNRSSRWPSESE--YSQEDSENRHLDQTIQSVRKFSYRENQ 1070
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 588 KMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEE 427
K R + + E S+ + R++S +K K++ KKE SKK KRT ++E E+
Sbjct: 81 KSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKK---KRTTSSSEDED 131
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 588 KMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEE 427
K R + + E S+ + R++S +K K++ KKE SKK KRT ++E E+
Sbjct: 81 KSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKK---KRTTSSSEDED 131
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 32.3 bits (70), Expect = 0.36
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Frame = -1
Query: 564 QQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDS--SHL----- 406
Q++ L + K S+RE KL+ K Q KLN E N+S SH+
Sbjct: 268 QEKNLEAAKKASQREV---EKLQQEKMAAENLAQESSEKLNVAKETTNESSKSHIKVPGD 324
Query: 405 LWQNRNSNKRHANLMPE--ELPFTNYVSNQMASQYQSE 298
Q+ SNK N +P+ E P V+N +Q ++
Sbjct: 325 STQHEQSNKSSLNHIPKATETPIQGQVTNNTVTQMSNQ 362
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -1
Query: 627 ECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHK-LECSKKETSKKFQSKRT 451
+C+ + K ED K+ N + + SN +++ + S+ K +E S + SKK +
Sbjct: 650 KCYVIITPKKED-KIELVDNIKTDNTTSNTESNIKTSSIKESNIETSSLKVSKKIEGSGN 708
Query: 450 KLNTETEEWND 418
K+N ++++ +D
Sbjct: 709 KMNKKSKKSDD 719
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -1
Query: 597 EDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWND 418
+D K S ++ K S+RE + K E KKE KK K+ + ++ +D
Sbjct: 147 KDEKKEKSKKSKKSSKSKKSKKSKREKKDEEKKEDDKKEDDKK-DDKKEDEKKDDDKKDD 205
Query: 417 SSHLLW 400
+ W
Sbjct: 206 EKNYFW 211
>U40424-5|AAA81461.2| 638|Caenorhabditis elegans Hypothetical
protein C24A3.1 protein.
Length = 638
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/87 (27%), Positives = 40/87 (45%)
Frame = -1
Query: 477 SKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSE 298
SKK + KLN ET ND +L+ + + K N + F + +S + S +++
Sbjct: 262 SKKGDVDKEKLNEETRRLNDKINLI-TSEVTKKMTENQQKAKDDFNSRIS-VLESMIRAQ 319
Query: 297 FLNSHLVTSNVQTMGHNVDRTLASFSG 217
S + +N M H+ + LA SG
Sbjct: 320 ---SERIVANENEMRHSFEAKLAELSG 343
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/111 (18%), Positives = 43/111 (38%)
Frame = -1
Query: 633 PTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKR 454
P+ + + K ++ + E + +Y + L+ S+ + FQ++R
Sbjct: 123 PSAPNEKSRRKRTTFSPEQATRLEAEYIGDSYMAREKRHLLAQSLKLSENQVKTWFQNRR 182
Query: 453 TKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQS 301
K + + N S+H R+S R ++ P T M +Q Q+
Sbjct: 183 AKDKRDRKSENASNHTSNSRRSSPSRKSSSDSTPTP-TQATQFDMPTQIQT 232
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical protein
C54D10.7 protein.
Length = 1144
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = -1
Query: 618 NYTSHKYED----LKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRT 451
N H+ E+ ++ +EKL Y+ R+ + + + K+ Q ++
Sbjct: 890 NQRQHEIEENERKMEFERKQTEHEEKLQQMYEQFERDREEMQRQHQERADKMKQ-QWEQI 948
Query: 450 KLNTETEEWNDSSHLLWQNRNSNKRHANLMPEEL 349
+ + + WND W NR + R AN EL
Sbjct: 949 MMMIKHKMWNDIIERNWTNRLNVLRSANKKVAEL 982
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -3
Query: 238 NFSQFFGNISGQFQSQHYIP*NNHEGPVVINEKRQNSNYYYNN 110
NF Q++G Q Q Y NN+ N+++Q N Y NN
Sbjct: 24 NFQQYYGYPQQQQQGNQYYN-NNNNNNGYYNQQQQQFNGYNNN 65
>AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical
protein Y116F11B.6 protein.
Length = 345
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/71 (22%), Positives = 33/71 (46%)
Frame = -1
Query: 597 EDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWND 418
ED++ + + +K+ N K SR+E H+ ++KE +KK + +
Sbjct: 224 EDVENIKKQDVKLKKIEKNLKESRKELKEAHQEYLNRKELAKKGNKREGTYMSHWSRTKT 283
Query: 417 SSHLLWQNRNS 385
++LL + N+
Sbjct: 284 KTNLLEKKFNT 294
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = -1
Query: 600 YEDLKMRNSSNYQQEKLPSNYKTSRRESAT---KHKLECSKKETSKK-FQSKRTKLNTET 433
YED RN +YQQ++ + Y R E T K+ + TS + F K + E
Sbjct: 193 YEDFVYRNYQSYQQQQ-QNQYARRRHEEYTDGFKYSSSSNPHSTSNEPFHDKSHNSDVEK 251
Query: 432 EEW 424
EE+
Sbjct: 252 EEY 254
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = -1
Query: 603 KYEDLKMRNSSNYQQEKLPSNYKTSR-----RESATKHKLECSKKETSKKFQSKRTKLNT 439
++++ +M + YQQ + + + E K E +++ Q + K
Sbjct: 134 RFKNEEMDRTLKYQQAQEEHTLRRQKIDEEFEEKCQKLNEEAQQRQREMNRQFEEIKKIM 193
Query: 438 ETEEWNDSSHLLWQNRNSNKRHAN 367
+ WND+ W NR + R AN
Sbjct: 194 QMRVWNDTIERNWTNRLNEARSAN 217
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -1
Query: 396 NRNSNKRHANL-MPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTMGHNVDRTLASFS 220
NRN+ K + +++P + Q+ S L + S +TMGH+ DR A+F+
Sbjct: 148 NRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFSTGETMGHSGDRLAAAFN 207
Query: 219 GTSR 208
+ R
Sbjct: 208 VSRR 211
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 546 SNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTET 433
S Y T +R H+L ++ + FQ+KR KL T
Sbjct: 109 SRYLTEKRRQELAHELGLNESQIKIWFQNKRAKLKKST 146
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 546 SNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTET 433
S Y T +R H+L ++ + FQ+KR KL T
Sbjct: 109 SRYLTEKRRQELAHELGLNESQIKIWFQNKRAKLKKST 146
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 612 TSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKK 484
T +D+K+ + S +++KLPS+ S E++T K K+
Sbjct: 721 TKKNEKDVKVESPSPIRKKKLPSDSDESDEETSTNKKQPAKKR 763
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 636 QPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKH 505
QP +NY+ ++YE+ NSSN Q+ + + ++ +H
Sbjct: 617 QPRRDNNYSKNRYENNYHNNSSNNQRSPYQAQNQQNQPTQQNQH 660
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,575,583
Number of Sequences: 27780
Number of extensions: 356205
Number of successful extensions: 1183
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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