Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a11r
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 36 0.036
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 32 0.45
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 32 0.45
At1g28410.1 68414.m03493 expressed protein 31 0.59
At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family pr... 30 1.8
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 30 1.8
At4g04450.1 68417.m00647 WRKY family transcription factor simila... 29 3.1
At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase, pu... 29 3.1
At1g76530.1 68414.m08906 auxin efflux carrier family protein con... 29 3.1
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 29 4.1
At2g31150.1 68415.m03803 expressed protein 29 4.1
At5g43175.1 68418.m05270 basic helix-loop-helix (bHLH) family pr... 28 5.5
At3g19190.1 68416.m02436 expressed protein 28 5.5
At1g56240.1 68414.m06465 SKP1 interacting partner 3-related cont... 28 5.5
At1g19620.1 68414.m02445 expressed protein 28 5.5
At5g52170.1 68418.m06476 homeobox-leucine zipper family protein ... 28 7.2
At5g41070.1 68418.m04992 double-stranded RNA-binding domain (DsR... 28 7.2
At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR... 28 7.2
At3g59040.1 68416.m06581 pentatricopeptide (PPR) repeat-containi... 28 7.2
At1g73930.1 68414.m08562 expressed protein 28 7.2
At5g09930.1 68418.m01148 ABC transporter family protein 27 9.6
At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR... 27 9.6
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 27 9.6
At4g26600.1 68417.m03834 nucleolar protein, putative similar to ... 27 9.6
At4g19550.1 68417.m02875 expressed protein 27 9.6
At4g03250.1 68417.m00444 homeobox-leucine zipper family protein ... 27 9.6
At1g77020.1 68414.m08969 DNAJ heat shock N-terminal domain-conta... 27 9.6
At1g45130.1 68414.m05173 beta-galactosidase, putative / lactase,... 27 9.6
At1g26780.1 68414.m03260 myb family transcription factor (MYB117... 27 9.6
At1g22070.1 68414.m02760 bZIP family transcription factor (TGA3)... 27 9.6
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 35.5 bits (78), Expect = 0.036
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -1
Query: 594 DLKMRNSSNYQQEKLPS-NYKTSRRESATKHKLECS-KKETSKKFQSK--RTKLNTETEE 427
DLK + +EK S N+K+ ++E +H+ S KKE KK + K +K + E+
Sbjct: 1057 DLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEED 1116
Query: 426 WNDSSHLLWQNRNSNKRHAN 367
D L QN N K N
Sbjct: 1117 KKDMEKLEDQNSNKKKEDKN 1136
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = -1
Query: 627 ECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTK 448
E N+ S K ED K + N +K + + E + K E KK+ K K
Sbjct: 1072 ESENHKSKKKED-KKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNK 1130
Query: 447 LNTETEEWNDSSHLLWQNRNSNKR 376
+ E S H+ + S+K+
Sbjct: 1131 KKEDKNEKKKSQHVKLVKKESDKK 1154
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = -1
Query: 618 NYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNT 439
N +YE+ K + ++EK S K + + + K SKKE + K K
Sbjct: 1009 NREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERK---SKKEKEESRDLKAKKKEE 1065
Query: 438 ETEEWNDSSHLLWQNRNSNKRH 373
ET+E +S + + + K H
Sbjct: 1066 ETKEKKESENHKSKKKEDKKEH 1087
Score = 32.7 bits (71), Expect = 0.25
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = -1
Query: 639 NQPTECHNYTSHKYE-DLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQ 463
++ E + S K E D K + SS QQ+K K S + K++ E KK+TS +
Sbjct: 1163 SETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNE-EDRKKQTSVEEN 1221
Query: 462 SKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQS-EFLNS 286
K+ + E + D + S + ++ E N +Q +Q S E N
Sbjct: 1222 KKQKETKKEKNKPKDDKKN--TTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNE 1279
Query: 285 HLVTSNVQTMGHN 247
L+ ++ Q H+
Sbjct: 1280 ILMQADSQADSHS 1292
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -1
Query: 648 IDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECS-KKETSK 472
+DY++ H++ S K+E K R+SS+ E +++SRR+ +E + ++SK
Sbjct: 728 VDYSKDKRSHHHRSRKHE--KHRDSSD--DEHHHHRHRSSRRKHEDSSDVEHGHRHKSSK 783
Query: 471 KFQSKRTKLNTETEEWNDSSHL 406
+ + + ET +D S L
Sbjct: 784 RIKKDEKTVEEETVSKSDQSDL 805
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 582 RNSSNYQQEKLPSNYKTSRRESATKHKLECSKKET--SKKFQSKRTKLNTETEEWNDSSH 409
++S + ++ K + Y + R S KHK E S + S+ R +++ E DSS
Sbjct: 653 KHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSD 712
Query: 408 LLWQNRNSNKRHA 370
++R+ + +H+
Sbjct: 713 NEGEHRHRSSKHS 725
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = -1
Query: 648 IDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECS-KKETSK 472
+DY++ H++ S K+E K R+SS+ E +++SRR+ +E + ++SK
Sbjct: 728 VDYSKDKRSHHHRSRKHE--KHRDSSD--DEHHHHRHRSSRRKHEDSSDVEHGHRHKSSK 783
Query: 471 KFQSKRTKLNTETEEWNDSSHL 406
+ + + ET +D S L
Sbjct: 784 RIKKDEKTVEEETVSKSDQSDL 805
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -1
Query: 582 RNSSNYQQEKLPSNYKTSRRESATKHKLECSKKET--SKKFQSKRTKLNTETEEWNDSSH 409
++S + ++ K + Y + R S KHK E S + S+ R +++ E DSS
Sbjct: 653 KHSCSRKRHKHKTRYSSKDRHSRDKHKHESSSDDEYHSRSRHRHRHSKSSDRHELYDSSD 712
Query: 408 LLWQNRNSNKRHA 370
++R+ + +H+
Sbjct: 713 NEGEHRHRSSKHS 725
>At1g28410.1 68414.m03493 expressed protein
Length = 301
Score = 31.5 bits (68), Expect = 0.59
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = -1
Query: 561 QEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLN--TE--TEEWNDSSHLLWQN 394
+E++ + R + H LE +E K ++K ++ TE TE+W HL
Sbjct: 103 EEEVKLLWAALRTTNFELHVLEDKAREAKNKLKAKALEVEQMTEVVTEQWIQVQHLEQMR 162
Query: 393 RNSNKRHANLMPEELPFTNYVSN 325
+N+RH P PF +S+
Sbjct: 163 EFNNRRHHT--PSRCPFVKLMSD 183
>At3g54870.1 68416.m06079 armadillo/beta-catenin repeat family
protein / kinesin motor family protein kinesin,
Syncephalastrum racemosum, AJ225894
Length = 941
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = -1
Query: 621 HNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLN 442
H T K L + S ++QEK NY+ R + T H E E KK + + + N
Sbjct: 596 HQLTEMK-NILSKQQKSIHEQEK--GNYQYQRELAETTHTYESKIAELQKKLEGENARSN 652
Query: 441 TETEEWNDSSHLL 403
++ L+
Sbjct: 653 AAEDQLRQMKRLI 665
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -1
Query: 591 LKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSK 487
LK S+ Q KLPS+ T++ S TKH+ E K
Sbjct: 343 LKKSKDSSLTQPKLPSSEVTAQELSCTKHENEIGK 377
>At4g04450.1 68417.m00647 WRKY family transcription factor similar
to A. fatua wild oat ABF2 DNA-binding protein, GenBank
accession number S61414
Length = 528
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = -1
Query: 528 RRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEEL 349
++ S +L+ +T+ F S + +L + D HL N N ++ + +PE +
Sbjct: 121 KKASEDNQRLKQMLSQTTNNFNSLQMQLVAVMRQQEDHHHLATTENNDNVKNRHEVPEMV 180
Query: 348 P 346
P
Sbjct: 181 P 181
>At2g18800.1 68415.m02188 xyloglucan:xyloglucosyl transferase,
putative / xyloglucan endotransglycosylase, putative /
endo-xyloglucan transferase, putative similar to
xyloglucan endotransglycosylase TCH4 GI:886116 from
[Arabidopsis thaliana]
Length = 305
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 699 GNLMTGNYASGPFPGDFIDYNQPTEC 622
G L+ N++ GPF F++YN C
Sbjct: 200 GGLVKTNWSQGPFVASFMNYNSENAC 225
>At1g76530.1 68414.m08906 auxin efflux carrier family protein
contains auxin efflux carrier domain, Pfam:PF03547
Length = 415
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 639 NQPTECHNYT-SHKYED-LKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKK 484
N P E H ++ Y+D K++ S+ ++EK N++ R E + + SKK
Sbjct: 189 NSPVETHTHSIESNYDDSCKVQLISSKEEEKEEDNHQVGRWEEVKQRVVSLSKK 242
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo sapiens]
Length = 1322
Score = 28.7 bits (61), Expect = 4.1
Identities = 35/143 (24%), Positives = 60/143 (41%)
Frame = -1
Query: 660 PGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKE 481
PGD + Y QP + + D+ KLP + +S AT K KK+
Sbjct: 835 PGDSMAYGQPLQAGDERGLDSRDVSA---------KLPESGSSSGLV-ATNSK---GKKQ 881
Query: 480 TSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQS 301
+K Q +T + N + Q+++ N A+L+P+ L ++ MASQ +
Sbjct: 882 KAKNSQGPGLS-STSSNVANLADSFNEQSQSLNHPMADLLPQLLALQETMTQVMASQKEM 940
Query: 300 EFLNSHLVTSNVQTMGHNVDRTL 232
+ S+ VT + G ++ L
Sbjct: 941 QRQLSNAVTGPIVKEGKKLEVAL 963
>At2g31150.1 68415.m03803 expressed protein
Length = 309
Score = 28.7 bits (61), Expect = 4.1
Identities = 27/102 (26%), Positives = 45/102 (44%)
Frame = -1
Query: 603 KYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEW 424
K E+ K +S Q K S S + KH E SKK+ S K+ + + + E
Sbjct: 90 KKEEKKTEEASKGQGGK-ESETVDSLLKLLRKHSGEQSKKQVSNFNSEKQLQRDDDASER 148
Query: 423 NDSSHLLWQNRNSNKRHANLMPEELPFTNYVSNQMASQYQSE 298
+ S + +R NK H N P P +++ N +++S+
Sbjct: 149 QNHSSSRFDSR--NKDH-NATPFTRPASSFKRNSPVPRHKSQ 187
>At5g43175.1 68418.m05270 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 223
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/93 (22%), Positives = 38/93 (40%)
Frame = -1
Query: 639 NQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQS 460
N P E ++S + SNY SN++T+R + + L+ KK+ K S
Sbjct: 32 NAPNETDVFSSDDFFPFGTILQSNYAAVLDGSNHQTNRNVDSRQDLLKPRKKQ---KLSS 88
Query: 459 KRTKLNTETEEWNDSSHLLWQNRNSNKRHANLM 361
+ + W D L N + +++ L+
Sbjct: 89 ESNLVTEPKTAWRDGQSLSSYNSSDDEKALGLV 121
>At3g19190.1 68416.m02436 expressed protein
Length = 1861
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = -1
Query: 402 WQNRNSNKRHANL---MPEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTM 256
W N +S + NL + E +P T++ NQ+AS +SE L + N + +
Sbjct: 626 WLNLHSVEMLVNLFNDVSESIPITSHERNQVASSSKSESLRGSVSICNARVI 677
>At1g56240.1 68414.m06465 SKP1 interacting partner 3-related
contains similarity to SKP1 interacting partner 3
GI:10716951 from [Arabidopsis thaliana]
Length = 284
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 588 KMRNSSNYQQEK-LPSNYKTSRRESATKHKLECSKKE 481
++ S++ EK LPS+YK+ +S H++ SKKE
Sbjct: 32 RLAGDSDFVWEKFLPSHYKSLISQSTDHHRIFSSKKE 68
>At1g19620.1 68414.m02445 expressed protein
Length = 317
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/77 (24%), Positives = 34/77 (44%)
Frame = -1
Query: 642 YNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQ 463
YN T N + + +S +Y QE + + K+ RR S ++ K+ E +++
Sbjct: 88 YNNSTYRENVPAFQAVKAVEESSYSYDQEVVEMSSKSYRRTSRSEKKM----TERMVEYR 143
Query: 462 SKRTKLNTETEEWNDSS 412
T+ T+T W S
Sbjct: 144 KTETERVTKTGSWRSQS 160
>At5g52170.1 68418.m06476 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Anthocyaninless2 (ANL2) (GP:5702094) [Arabidopsis
thaliana]; contains Pfam PF00046: Homeobox domain and
Pfam PF01852: START domain
Length = 682
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = -1
Query: 603 KYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLECSKKET--SKK----FQSKRTKLN 442
K K ++YQ ++L S +K + K +LE KK T SK+ FQ++RT++
Sbjct: 55 KKRKTKYHRHTSYQIQELESFFKECPHPNE-KQRLELGKKLTLESKQIKFWFQNRRTQMK 113
Query: 441 TETE 430
T+ E
Sbjct: 114 TQLE 117
>At5g41070.1 68418.m04992 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 393
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = -1
Query: 537 KTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQNRNSNKRHANLMP 358
K S +S + K + + +F+ K + T +W + ++SNK +L+
Sbjct: 155 KMSSLDSQDEEKEQEAVARVLSRFKPKEVRRRETTNQWRRRT----SQQDSNK---DLLI 207
Query: 357 EELPFTNYVSNQMASQYQSEFLNSH 283
E L + N ++NQ +S + N H
Sbjct: 208 ERLRWINLLTNQASSSSSTSTPNQH 232
>At4g08450.1 68417.m01393 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1234
Score = 27.9 bits (59), Expect = 7.2
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = -1
Query: 723 YSNFMQNSGNLMTGN---YASGPFPGDFIDYNQPTE-CHNYTSHKYEDLKMRNSSNYQQE 556
YS+ ++S + GN Y+ D D T+ Y H DL N +Y +E
Sbjct: 1124 YSDECEDSDDSDLGNEIDYSEDYEDRDTSDLGNETDYSEEYEDHDSSDLG--NEYDYNEE 1181
Query: 555 KLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLN 442
++ E T H EC + KK SKR ++N
Sbjct: 1182 CEENDDNDLVLE--TDHNEECQDNDVEKKRSSKRMRVN 1217
>At3g59040.1 68416.m06581 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 583
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -1
Query: 576 SSNYQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWNDSSHLLWQ 397
SSN+ Q KL +N + + ++ C +KF KR K+ + +++ W+
Sbjct: 15 SSNHSQRKLQNNIINVGVKIQNRFRVVCMGMLAPRKFLQKRRKMEVFKDAADETDQKRWR 74
>At1g73930.1 68414.m08562 expressed protein
Length = 623
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/25 (36%), Positives = 20/25 (80%)
Frame = +3
Query: 201 NWPEMFPKNWLKFCPHYAPWFERSK 275
NWP+++ + +L+ P+++PWF+R +
Sbjct: 500 NWPDLY-RRFLRG-PNFSPWFQRRR 522
>At5g09930.1 68418.m01148 ABC transporter family protein
Length = 678
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Frame = -1
Query: 621 HNYTSHKYEDLKMRNSSNYQQ--EKLPSNYKTSRRESATKHKLECSKKETSKKFQS--KR 454
+NY K + + R + EK P K + +K + E KK+ K FQ+ K+
Sbjct: 611 YNYFLEKNVEARARELEREAELEEKAP---KVKAKSKMSKAEREARKKQKMKAFQASKKK 667
Query: 453 TKLNTETEEWN 421
+K + + WN
Sbjct: 668 SKSSKNAKRWN 678
>At4g36140.1 68417.m05144 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1607
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 587 K*ETVRIINKKNCRQITRLPGGNRLRNIS-*NVLKKRPVKNFKVKEPN 447
K + + +I+ + CR++ R P +L+++ N+ R +K+F PN
Sbjct: 1053 KAQNIELIDLQGCRKLQRFPATGQLQHLRVVNLSGCREIKSFPEVSPN 1100
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = -1
Query: 630 TECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATK---HKLECSKKETSKKFQS 460
T N T+ + + N++ Q+E S + + H L C K +T+ +
Sbjct: 16 THSSNSTASDGTEREENNNNESQEETRTSRSPNEALDEIRRQQTHNLYCPKCKTNITKSA 75
Query: 459 KRTKLNTETEEWNDSSHLLW 400
+ N ET+ + +++LW
Sbjct: 76 ELVVKNQETDSYKTKAYVLW 95
>At4g26600.1 68417.m03834 nucleolar protein, putative similar to
SP|P46087 Proliferating-cell nucleolar antigen p120
(Proliferation-associated nucleolar protein p120) {Homo
sapiens}; contains Pfam profile PF01189: NOL1/NOP2/sun
family
Length = 671
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 558 EKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTETEEWN 421
EK P +RES TK K SK+ + NT+TE N
Sbjct: 585 EKPPVASGQPKRESNTKEDTNKRKNPRSKEIHKGKRNKNTKTESGN 630
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/82 (26%), Positives = 33/82 (40%)
Frame = -1
Query: 675 ASGPFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHKLE 496
+ G D D + N +++K LK R E Y R+ + K K
Sbjct: 27 SKGDLAEDLSDISDAEVAENLSNNKEFILKKRAWELMNPEYQKGKY---RKVTTRKKKDP 83
Query: 495 CSKKETSKKFQSKRTKLNTETE 430
+K SKK + +T+ N ETE
Sbjct: 84 ANKIAPSKKTSATKTESNAETE 105
>At4g03250.1 68417.m00444 homeobox-leucine zipper family protein
similar to homeobox transcription factor Hox7
[Lycopersicon peruvianum] GI:19486; contains Pfam
PF00046: Homeobox domain
Length = 476
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -1
Query: 360 PEELPFTNYVSNQMASQYQSEFLNSHLVTSNVQTM-GHNVD 241
P E+P TN ++S+ +E +HLV +NVQ + G N++
Sbjct: 309 PREIPVTNSKKGWISSKSWAEGSRNHLV-ANVQNLSGSNIE 348
>At1g77020.1 68414.m08969 DNAJ heat shock N-terminal
domain-containing protein similar to SP|P39101 CAJ1
protein [Saccharomyces cerevisiae]; contains Pfam
profile PF00226 DnaJ domain
Length = 379
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -1
Query: 567 YQQEKLPSNYKTSRRESATKHKLECSKKETSKKFQSKRTKLNTE 436
+QQEK N TSR+E + S + S + S RT L T+
Sbjct: 310 FQQEKQSKNGTTSRKEDEDSDDDDSSSDDDSSQPLSYRTPLLTQ 353
>At1g45130.1 68414.m05173 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase [Lycopersicon
esculentum] GI:7939619, beta-galactosidase BG1
GI:15081596 from [Vitis vinifera]; contains Pfam profile
PF01301: Glycosyl hydrolases family 35
Length = 732
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = -1
Query: 723 YSNFMQNSGNLMTGNYASGPFPGDFIDYNQPTECHNYTSH-KYEDLKMRNSSNYQQE 556
Y N+ G G A GPF DY+ P + + KY LK + + Q E
Sbjct: 291 YINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLVQEPKYSHLKQLHQAIKQCE 347
>At1g26780.1 68414.m03260 myb family transcription factor (MYB117)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 280
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 675 ASGPFPGDFIDYNQPTECHNYTSHKYEDLK--MRNSSNYQQEKLPSNYKTSRRESATKHK 502
+S FP + I+ +Q H TSH++E LK + + + +++E +N S ES K
Sbjct: 20 SSWDFPFNDINIHQHHHRHCNTSHEFEILKSPLGDVAVHEEESNNNNPNFSNSESGKKET 79
Query: 501 LECSKKETS 475
+ + +S
Sbjct: 80 TDSGQSWSS 88
>At1g22070.1 68414.m02760 bZIP family transcription factor (TGA3)
identical to transcription factor GI:304113 from
[Arabidopsis thaliana]
Length = 384
Score = 27.5 bits (58), Expect = 9.6
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = -1
Query: 618 NYTSHKYEDLKMRNSSNYQQEKLPSNYKTSR-----RESATKHKLECSKKETSKKFQSKR 454
NYTS L+ SSN Q++ N K R RE+A K +L KK ++ + R
Sbjct: 71 NYTSVYNNSLEAEPSSNNDQDEDRINDKMKRRLAQNREAARKSRLR--KKAHVQQLEESR 128
Query: 453 TKLNTETEE 427
KL+ +E
Sbjct: 129 LKLSQLEQE 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,176,183
Number of Sequences: 28952
Number of extensions: 310472
Number of successful extensions: 1036
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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