Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a11f
         (661 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051417-1|AAK92841.1|  577|Drosophila melanogaster GH09468p pro...    38   0.016
AY071069-1|AAL48691.1|  753|Drosophila melanogaster RE14415p pro...    34   0.15 
AE014297-2062|AAF55210.1| 1256|Drosophila melanogaster CG18516-P...    29   5.6  
AY113398-1|AAM29403.1|  915|Drosophila melanogaster RE09008p pro...    29   7.4  
AE013599-3371|AAM68218.1|  915|Drosophila melanogaster CG5819-PB...    29   7.4  
AE013599-3370|AAF46828.1|  915|Drosophila melanogaster CG5819-PA...    29   7.4  
BT016009-1|AAV36894.1| 1058|Drosophila melanogaster RE24187p pro...    28   9.8  
BT011019-1|AAR30179.1| 1067|Drosophila melanogaster RE59722p pro...    28   9.8  
BT001380-1|AAN71135.1|  555|Drosophila melanogaster GH02708p pro...    28   9.8  
AE014297-89|AAF52127.2| 1088|Drosophila melanogaster CG9809-PA, ...    28   9.8  
AE014297-88|AAN13314.2| 1067|Drosophila melanogaster CG9809-PB, ...    28   9.8  
AE014297-87|AAN13315.2| 1079|Drosophila melanogaster CG9809-PC, ...    28   9.8  

>AY051417-1|AAK92841.1|  577|Drosophila melanogaster GH09468p
           protein.
          Length = 577

 Score = 37.5 bits (83), Expect = 0.016
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
 Frame = +1

Query: 220 KIQDISSAKYMPSSQKYNEFNSTVETGVAQVSHFPPILDYTENTYQQQFPGTNLYNATTN 399
           K   +++   +P  Q+Y    S   +      H PP+     N Y QQ P  N Y   + 
Sbjct: 359 KTDHVNTVNELPPQQRYPP-RSPAHSPNYGGPHSPPLQLPPNNAYPQQPPNGNGYPPNST 417

Query: 400 TISNSFYSNFMQNSGNLMTGNYAS-GPFPGDFIDY 501
           T S  + S    N+ N    +Y S  PFP D ++Y
Sbjct: 418 TYSYKYSST--TNTNNRRGPDYGSPSPFPVDGVEY 450


>AY071069-1|AAL48691.1|  753|Drosophila melanogaster RE14415p
           protein.
          Length = 753

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
 Frame = +1

Query: 298 GVAQV-SHFPPILDYTENTYQQQFPGTNLYNATTNTISNSFYSNFMQNSGNLMTGNYASG 474
           G +QV S   PI+ +  N + +Q P      AT    +N FY++ MQ   N++  N    
Sbjct: 555 GQSQVDSQTNPIMVHL-NVFPKQKP-----TATIRASTNPFYNHNMQR--NMINSNDLPP 606

Query: 475 PFPGDFIDYNQPTECHNYTSHKYEDLKMRNSSNYQQEKLPSNYKTSRRESATKHK 639
           P P   I+  Q  E +   S   +  + ++  + QQ+  PS+ KT +++ AT+ +
Sbjct: 607 PNPPSPIEPRQ--EVNGSGSGLQQQQQQQHHPSQQQQHHPSHNKTQQQQEATQQQ 659


>AE014297-2062|AAF55210.1| 1256|Drosophila melanogaster CG18516-PA
           protein.
          Length = 1256

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 343 ENTYQQQFPGT--NLYNATTNTISNSFYSNFMQNSGNLMTGNYASGPFPGDFIDYNQPTE 516
           E+  Q  +P T   ++ A  N + +S    FM   GN   G Y   P    FID N   +
Sbjct: 201 EDGSQWYWPSTLAEIFEALEN-VGDS--EEFMLVGGNTAHGVYRRSPDIKHFIDVNGVED 257

Query: 517 CHNYTSHK 540
            H Y+S K
Sbjct: 258 LHQYSSDK 265


>AY113398-1|AAM29403.1|  915|Drosophila melanogaster RE09008p
           protein.
          Length = 915

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 376 NLYNATTNTISNSFYSNFMQNSGNLMTGNYASGPFPGDFIDYNQ 507
           NL N    T+ N+ +  F + +   + GN  + P P ++ D N+
Sbjct: 418 NLANCRLTTVRNNTFREFPELADLHLNGNRLTSPIPPNYFDGNK 461


>AE013599-3371|AAM68218.1|  915|Drosophila melanogaster CG5819-PB,
           isoform B protein.
          Length = 915

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 376 NLYNATTNTISNSFYSNFMQNSGNLMTGNYASGPFPGDFIDYNQ 507
           NL N    T+ N+ +  F + +   + GN  + P P ++ D N+
Sbjct: 418 NLANCRLTTVRNNTFREFPELADLHLNGNRLTSPIPPNYFDGNK 461


>AE013599-3370|AAF46828.1|  915|Drosophila melanogaster CG5819-PA,
           isoform A protein.
          Length = 915

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 376 NLYNATTNTISNSFYSNFMQNSGNLMTGNYASGPFPGDFIDYNQ 507
           NL N    T+ N+ +  F + +   + GN  + P P ++ D N+
Sbjct: 418 NLANCRLTTVRNNTFREFPELADLHLNGNRLTSPIPPNYFDGNK 461


>BT016009-1|AAV36894.1| 1058|Drosophila melanogaster RE24187p
           protein.
          Length = 1058

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 MPSSQKYNEFNSTVETGVAQVSHFPPILDYTENTY--QQQFPGTNL 381
           M  +Q+    +S V   V +V+  PP+ D  ++TY  + + PGT +
Sbjct: 541 MKRAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYCMETEDPGTEI 586


>BT011019-1|AAR30179.1| 1067|Drosophila melanogaster RE59722p
           protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 MPSSQKYNEFNSTVETGVAQVSHFPPILDYTENTY--QQQFPGTNL 381
           M  +Q+    +S V   V +V+  PP+ D  ++TY  + + PGT +
Sbjct: 550 MKRAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYCMETEDPGTEI 595


>BT001380-1|AAN71135.1|  555|Drosophila melanogaster GH02708p
           protein.
          Length = 555

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 MPSSQKYNEFNSTVETGVAQVSHFPPILDYTENTY--QQQFPGTNL 381
           M  +Q+    +S V   V +V+  PP+ D  ++TY  + + PGT +
Sbjct: 17  MKRAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYCMETEDPGTEI 62


>AE014297-89|AAF52127.2| 1088|Drosophila melanogaster CG9809-PA,
           isoform A protein.
          Length = 1088

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 MPSSQKYNEFNSTVETGVAQVSHFPPILDYTENTY--QQQFPGTNL 381
           M  +Q+    +S V   V +V+  PP+ D  ++TY  + + PGT +
Sbjct: 550 MKRAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYCMETEDPGTEI 595


>AE014297-88|AAN13314.2| 1067|Drosophila melanogaster CG9809-PB,
           isoform B protein.
          Length = 1067

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 MPSSQKYNEFNSTVETGVAQVSHFPPILDYTENTY--QQQFPGTNL 381
           M  +Q+    +S V   V +V+  PP+ D  ++TY  + + PGT +
Sbjct: 550 MKRAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYCMETEDPGTEI 595


>AE014297-87|AAN13315.2| 1079|Drosophila melanogaster CG9809-PC,
           isoform C protein.
          Length = 1079

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +1

Query: 250 MPSSQKYNEFNSTVETGVAQVSHFPPILDYTENTY--QQQFPGTNL 381
           M  +Q+    +S V   V +V+  PP+ D  ++TY  + + PGT +
Sbjct: 541 MKRAQQLKIIDSRVSAKVPRVTKLPPLKDIVKDTYCMETEDPGTEI 586


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.309    0.124    0.358 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,709,914
Number of Sequences: 53049
Number of extensions: 563619
Number of successful extensions: 1359
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)