Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a10r
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0624 - 4681834-4682298,4684250-4684398,4684479-4684557,468... 105 3e-23
06_03_0913 + 25913231-25913609,25913702-25913775,25914400-259145... 102 3e-22
08_02_1395 - 26737972-26738418,26738505-26738738,26738887-267391... 90 2e-18
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 86 2e-17
01_07_0024 - 40559423-40559863,40559959-40560192,40560546-405608... 85 4e-17
11_05_0069 - 18814789-18815326,18815742-18816001,18816077-188166... 85 6e-17
01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,986... 85 7e-17
11_06_0047 + 19595904-19596185,19596284-19596424,19597195-195973... 84 1e-16
08_02_1418 - 26931896-26932339,26932435-26932668,26932805-269331... 83 2e-16
04_04_0794 + 28104725-28104829,28105721-28105762,28106470-281065... 77 1e-14
03_03_0043 + 14016958-14017106,14017198-14017291,14018488-140185... 76 3e-14
12_01_0934 - 9273325-9273807,9273898-9274062,9274155-9274235,927... 64 1e-10
11_01_0199 + 1563483-1563572,1563673-1563852,1564091-1564402,156... 63 2e-10
05_04_0438 + 21244735-21244782,21245089-21245274,21245307-212453... 59 2e-10
07_03_1133 - 24199643-24200422,24200786-24200968,24201241-242013... 60 2e-09
10_05_0114 + 9294747-9294788,9294883-9294996,9295066-9295173,929... 59 4e-09
04_04_0939 - 29530242-29531087,29531406-29531597,29531690-295317... 54 2e-07
03_02_0110 - 5678057-5678794,5679279-5679470,5679971-5680087,568... 43 3e-04
03_02_0535 + 9277995-9278049,9278140-9278274,9278722-9278788,927... 40 0.002
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 38 0.011
01_06_1317 - 36251231-36251341,36252514-36252609,36252879-362529... 34 0.14
02_05_1239 + 35174901-35174903,35175001-35175102,35175180-351752... 33 0.18
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 29 5.2
01_06_0561 + 30251547-30252173,30252248-30252405,30253250-302541... 29 5.2
05_03_0314 + 12203589-12204675,12207915-12208861 28 6.9
>02_01_0624 -
4681834-4682298,4684250-4684398,4684479-4684557,
4684827-4684925,4685004-4685081,4685231-4685288,
4685814-4685913,4686000-4686008,4686105-4686138,
4686729-4686911,4687099-4687126,4687268-4687380,
4688253-4688459,4689212-4689511
Length = 633
Score = 105 bits (253), Expect = 3e-23
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 19/199 (9%)
Frame = -3
Query: 708 NRRDPGYVPQNSETYYRAIRQIPYYDKWKKRNIIL----SRLCHTCRCLRPLRAKHCRIC 541
+R+DPGY+ +N+ P + +L S+LC TC+ +RP+R+KHC C
Sbjct: 324 SRKDPGYIDKNTRDAQNQRDDEPLLKRGLDNPELLAGNWSQLCITCKIVRPVRSKHCSTC 383
Query: 540 KRCVAYFDHHCPFIYNCVGVRNRMWFFLF-VMSVAINCTLSIYFACYCXXXXXXXXXXXX 364
RCV FDHHCP++ NC+G +N+ FF+F ++ V+ +
Sbjct: 384 DRCVEQFDHHCPWVSNCIGKKNKWEFFMFLILEVSAMIITGVTAVIRVVGDPDSPASFGG 443
Query: 363 XXLEAIT-------------FCALGWI-LTCTSVLHACMNLTTNEMFNYKRYPYLRDKRG 226
+ T F G I LT NLTTNEM N RY YLR G
Sbjct: 444 WLNYSATNHPWVVSFVVMDLFLFFGVITLTVVQASQISRNLTTNEMANAMRYSYLRGPGG 503
Query: 225 RYQNPFSRGPIMNLFEFFV 169
R++NPF G N +F +
Sbjct: 504 RFRNPFDHGVRKNCSDFLL 522
>06_03_0913 +
25913231-25913609,25913702-25913775,25914400-25914540,
25914834-25914946,25915359-25915491,25916213-25916351,
25916428-25916527,25916906-25916963,25917122-25917199,
25917278-25917376,25917657-25917735,25917826-25917974,
25918529-25918834,25918994-25919032
Length = 628
Score = 102 bits (244), Expect = 3e-22
Identities = 62/200 (31%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Frame = -3
Query: 708 NRRDPGYVPQNSETYYRAIRQIPYYDKWKKRNIILS----RLCHTCRCLRPLRAKHCRIC 541
+R+DPGY+ N P +LS +LC TC+ +RP+R+KHC C
Sbjct: 359 SRKDPGYIKANIRDSQNQRDDEPLLKLELDNPALLSGNWSQLCITCKIVRPVRSKHCSTC 418
Query: 540 KRCVAYFDHHCPFIYNCVGVRNRMWFFLF----VMSVAINCTLSI------------YFA 409
RCV FDHHCP++ NC+G +N+ FF+F V ++ I + +I +
Sbjct: 419 DRCVEQFDHHCPWVSNCIGKKNKWEFFMFITLEVFAMIITGSAAIIRMVRDPASPASFIP 478
Query: 408 CYCXXXXXXXXXXXXXXLEAITFCALGWILTCTSVLHACMNLTTNEMFNYKRYPYLRDKR 229
++ F + +L N+TTNEM N RY YLR
Sbjct: 479 WLSYSAFNHTGALSFFIMDLFLFFGVA-VLAVVQASQIAKNITTNEMANSMRYSYLRGPG 537
Query: 228 GRYQNPFSRGPIMNLFEFFV 169
GR++NPF G N EF +
Sbjct: 538 GRFRNPFDHGARKNCSEFLL 557
>08_02_1395 -
26737972-26738418,26738505-26738738,26738887-26739183,
26739399-26739581,26739778-26739834,26739960-26740016,
26740228-26740322,26740714-26740765,26740821-26740910
Length = 503
Score = 90.2 bits (214), Expect = 2e-18
Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINCTLS 421
+ C TC RP R HC IC CV FDHHCP++ C+G+RN +F++FV S + C L
Sbjct: 238 KYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLC-LY 296
Query: 420 IYFACYCXXXXXXXXXXXXXXLE---------AITFCAL-GWILTCTSVLHACMNLTTNE 271
++ C+ I +C L W + SV H C ++TN+
Sbjct: 297 VFAFCWVYIIKIRNAESLSVWKAMLKTPASIVLIIYCFLCVWFVGGLSVFH-CYLMSTNQ 355
Query: 270 MFNYKRYPYLRDKRGRYQNPFSRGPIMNLFEFF 172
Y+ + Y D+R NP++RG + N E F
Sbjct: 356 T-TYENFRYRYDRRA---NPYNRGVLNNFLEIF 384
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 86.2 bits (204), Expect = 2e-17
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Frame = -3
Query: 612 IILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAIN 433
I+ + C TC RP R HC IC CV FDHHCP++ C+G RN +F++FV S +
Sbjct: 119 IVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGRRNYRFFYMFVFSTTLL 178
Query: 432 CTLSIYFACYCXXXXXXXXXXXXXXLE---------AITFCAL-GWILTCTSVLHACMNL 283
C L ++ C+ I +C + W + SV H + +
Sbjct: 179 C-LYVFGFCWVYIVKIRDAENSTIWKAMLKTPASIVLIIYCFICVWFVGGLSVFHFYL-M 236
Query: 282 TTNEMFNYKRYPYLRDKRGRYQNPFSRGPIMNLFEFF 172
+TN+ Y+ + Y D+R NP++RG + N E F
Sbjct: 237 STNQT-TYENFRYRYDRRA---NPYNRGMVNNFLEIF 269
>01_07_0024 -
40559423-40559863,40559959-40560192,40560546-40560842,
40561048-40561230,40561534-40561590,40561851-40561937
Length = 432
Score = 85.4 bits (202), Expect = 4e-17
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Frame = -3
Query: 609 ILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINC 430
+ ++ C TC RP R HC IC CV FDHHCP++ C+G+RN +F++FV S + C
Sbjct: 166 VKTKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFYMFVFSTTLLC 225
Query: 429 TLSIYFACYCXXXXXXXXXXXXXXLE-----------AITFCALGWILTCTSVLHACMNL 283
L ++ C+ TF A+ W + SV H + +
Sbjct: 226 -LYVFGFCWVYIVKIRNSEQITIWKAMAKTPASIALLVYTFIAV-WFVGGLSVFHLYL-M 282
Query: 282 TTNEMFNYKRYPYLRDKRGRYQNPFSRGPIMNLFE-FFVCLP 160
+TN+ Y+ + Y D+R NP++RG + N+ + FF +P
Sbjct: 283 STNQT-TYENFRYRYDQRA---NPYNRGVMENIKDIFFSAIP 320
>11_05_0069 -
18814789-18815326,18815742-18816001,18816077-18816631,
18816907-18817062
Length = 502
Score = 85.0 bits (201), Expect = 6e-17
Identities = 54/172 (31%), Positives = 74/172 (43%), Gaps = 14/172 (8%)
Frame = -3
Query: 642 PYYDKWKKRNIILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWF 463
P D + ++ + CHTC RP R HC +C CV FDHHCP++ C+G RN +F
Sbjct: 184 PTRDVYVNGVVVKVKYCHTCLLYRPPRCSHCSVCNNCVDRFDHHCPWVGQCIGKRNYRFF 243
Query: 462 FLFVMSVAINCTLSIYFACY-----------CXXXXXXXXXXXXXXLEAITFCALGWILT 316
F+F+ S C L ++ C+ C L TF W +
Sbjct: 244 FMFISSTTFLC-LYVFVFCWVNLAMTARQFGCSMGRAVVESPVSGILIVYTF-VTAWFVG 301
Query: 315 CTSVLHA---CMNLTTNEMFNYKRYPYLRDKRGRYQNPFSRGPIMNLFEFFV 169
+ H+ C N TT E F Y RY R NP +RG N+ E F+
Sbjct: 302 GLTAFHSYLVCTNQTTYENFRY-RYE-------RKANPHNRGVAKNVAEIFL 345
>01_01_1220 + 9862195-9862281,9862427-9862646,9862764-9862916,
9863016-9863674,9863749-9863852,9863950-9864192,
9864262-9864376,9864696-9864909,9864995-9865511,
9866439-9866448,9867363-9867551,9867755-9868084,
9868639-9868872,9869303-9869743
Length = 1171
Score = 84.6 bits (200), Expect = 7e-17
Identities = 48/157 (30%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Frame = -3
Query: 612 IILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAIN 433
++ + C TC RP RA HC IC CV FDHHCP++ C+G+RN +FFLF+ + +
Sbjct: 904 VVKVKYCDTCLLYRPPRASHCSICNNCVRKFDHHCPWVGQCIGLRNYRFFFLFISTSTLL 963
Query: 432 CT---LSIYFACYCXXXXXXXXXXXXXXLEAI-------TFCALGWILTCTSVLHACMNL 283
C + + E + TF ++ W + +V H + +
Sbjct: 964 CVYVFVVSWLNIVAHKDGNDGSLLKSMAGEPLSVVLIVYTFVSV-WFVGGLTVFHLYL-M 1021
Query: 282 TTNEMFNYKRYPYLRDKRGRYQNPFSRGPIMNLFEFF 172
+TN+ Y+ + Y DK+ +NP++RG I N+ E F
Sbjct: 1022 STNQT-TYENFRYRYDKK---ENPYNRGAISNIAEVF 1054
>11_06_0047 +
19595904-19596185,19596284-19596424,19597195-19597307,
19597970-19598049,19598557-19598720,19598931-19599060,
19599155-19599254,19599452-19599500,19599775-19599849,
19600026-19600124,19600745-19600823,19600897-19601045,
19601334-19601393,19601490-19601684
Length = 571
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Frame = -3
Query: 708 NRRDPGYVPQNSETY--YRAIRQIPYYDKWKKRNIILSRLCHTCRCLRPLRAKHCRICKR 535
+R++PGY+ N++ + +I N S+LC TC+ +RP+R+KHC CK
Sbjct: 336 SRKNPGYIQANTKRLDPKEPLMEIDLNSSAWTGN--WSQLCPTCKIIRPMRSKHCPTCKH 393
Query: 534 CVAYFDHHCPFIYNCVGVRNRMWFFLFV 451
CV FDHHCP+I NCVG RN+ FF+F+
Sbjct: 394 CVEQFDHHCPWISNCVGRRNKWDFFVFL 421
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = -3
Query: 288 NLTTNEMFNYKRYPYLRDKRGRYQNPFSRGPIMNLFEFFV 169
NLTTNE N RY YLR GR++NP+SRG N +F V
Sbjct: 511 NLTTNEAANQSRYAYLRGPDGRFRNPYSRGCRRNCADFLV 550
>08_02_1418 -
26931896-26932339,26932435-26932668,26932805-26933110,
26933462-26933644,26934386-26934493
Length = 424
Score = 83.4 bits (197), Expect = 2e-16
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Frame = -3
Query: 612 IILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAIN 433
++ + CHTC RP R HC IC CV FDHHCP++ C+G RN +FF+FV S +
Sbjct: 156 LVKVKYCHTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGKRNYRFFFMFVSSTTLL 215
Query: 432 CTLSIYFACY-----------CXXXXXXXXXXXXXXLEAITFCALGWILTCTSVLHACMN 286
C + ++ C+ C L TF A+ W + + H +
Sbjct: 216 C-VYVFAFCWVDLRIIMDTHRCKLGRAIMKSPVSGILILYTFIAV-WFVGGLTSFHLYL- 272
Query: 285 LTTNEMFNYKRYPYLRDKRGRYQNPFSRGPIMNLFE 178
++TN+ Y+ + Y D++ NP +RG + N E
Sbjct: 273 ISTNQT-TYENFRYRYDRK---TNPHNRGLVQNFIE 304
>04_04_0794 +
28104725-28104829,28105721-28105762,28106470-28106544,
28106811-28106950,28107036-28107093,28107239-28107241,
28107740-28107849,28108562-28108648,28108773-28108856,
28109212-28109277,28109377-28109488,28109949-28110149
Length = 360
Score = 77.4 bits (182), Expect = 1e-14
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Frame = -3
Query: 594 CHTCRCLR-PLRAKHCRICKRCVAYFDHHCPFIYNCVGVRN--RMWFFLFVMSVAINCTL 424
C CR ++ P R KHC C +CV FDHHC ++ C+ RN R W+++F +V T+
Sbjct: 133 CSYCRLIQEPPRTKHCHDCDKCVLQFDHHCVWLGTCIAKRNYCRFWWYIFEQTVLTVWTV 192
Query: 423 SIYFACYCXXXXXXXXXXXXXXLEAITFCALGWILTCTSVLHACM---NLTTNEMFNYKR 253
+ Y + + + + +L + HA + N TT E+ KR
Sbjct: 193 AFYIQFFYLGIVVSWWKFAIGIVLLVALILILVVLLPLLIFHAYLALTNQTTYEIARRKR 252
Query: 252 YPYLRDKRGRYQNPFSRGPIMNLFEFFV 169
YLR+ R +PFS+G NL++ +
Sbjct: 253 ISYLREVPSRV-HPFSKGICRNLYDLCI 279
>03_03_0043 +
14016958-14017106,14017198-14017291,14018488-14018582,
14018658-14018825,14019091-14019163,14019236-14019288,
14019720-14019811,14020141-14020193,14020272-14020397,
14020710-14020955
Length = 382
Score = 75.8 bits (178), Expect = 3e-14
Identities = 37/97 (38%), Positives = 55/97 (56%)
Frame = -3
Query: 738 AIMWMSWLIANRRDPGYVPQNSETYYRAIRQIPYYDKWKKRNIILSRLCHTCRCLRPLRA 559
AI + +++ + DPG V + + Y + PY I + C TC+ RP RA
Sbjct: 121 AIGALLFVLTSFSDPGTVTAENVSQY--LSAYPY-----DGIIFEEKECSTCKIARPARA 173
Query: 558 KHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVM 448
KHCRIC +CVA FDHHC ++ NC+G +N +F F++
Sbjct: 174 KHCRICDKCVARFDHHCGWMNNCIGEKNTRYFVAFLV 210
>12_01_0934 -
9273325-9273807,9273898-9274062,9274155-9274235,
9274347-9274475,9274590-9274661,9274758-9274826,
9275143-9275514,9275590-9275703,9275729-9275848
Length = 534
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRN------RMWFFLFVMSVAIN 433
C C C LR+KHC+ C RCV FDHHC ++ NC+G RN M+F L ++ +
Sbjct: 196 CPVCDCEVKLRSKHCKTCDRCVDGFDHHCRWLNNCIGRRNYASFILLMFFVLLMLVIEGG 255
Query: 432 CTLSIYFACY 403
++I+ C+
Sbjct: 256 TAIAIFVRCF 265
>11_01_0199 +
1563483-1563572,1563673-1563852,1564091-1564402,
1564753-1564800,1565205-1565438,1565632-1566219
Length = 483
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 26/173 (15%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGV----------------RNRM 469
+ C TC RP R+ HC IC CV FDHHCP++ C+G+ RN
Sbjct: 155 KFCETCLRYRPPRSSHCSICNNCVEKFDHHCPWVGQCIGLLKKTHQSSKLNYTRLNRNYR 214
Query: 468 WFFLFVMSVAINCTLSIYFA---CYCXXXXXXXXXXXXXXLEAITFCAL------GWILT 316
+FFLFV + C + F+ Y E +F + W +
Sbjct: 215 YFFLFVATSTFLCIIVFIFSWVNVYYERGDDGGSIWKALRKETYSFVLIIYTFIVVWFVG 274
Query: 315 CTSVLHACMNLTTNEMFNYKRYPYLRDKRGRYQNPFSRGPIMNLFE-FFVCLP 160
+V H + ++TN+ Y+ + Y +K+ NP+ + N E FF +P
Sbjct: 275 GLTVFHLYL-ISTNQT-TYENFRYHYNKK---DNPYRKSVAANFVEVFFTKIP 322
>05_04_0438 +
21244735-21244782,21245089-21245274,21245307-21245384,
21245385-21245678,21246137-21246262,21246935-21247168,
21247534-21248061
Length = 497
Score = 59.3 bits (137), Expect(2) = 2e-10
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = -3
Query: 612 IILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVG 484
++ + C TC RP R HC IC CV FDHHCP++ C+G
Sbjct: 159 LVKVKYCDTCMIYRPPRCSHCSICNNCVERFDHHCPWVGQCIG 201
Score = 23.8 bits (49), Expect(2) = 2e-10
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 489 VGVRNRMWFFLFVMSVAINC 430
+G RN +FFLFV S + C
Sbjct: 242 LGERNYRFFFLFVSSSTLLC 261
>07_03_1133 -
24199643-24200422,24200786-24200968,24201241-24201321,
24201439-24201567,24201814-24201885,24201970-24202038,
24202130-24202513,24203813-24203926,24204033-24204074
Length = 617
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/50 (46%), Positives = 31/50 (62%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMS 445
C C +KHCR+C +CV FDHHC ++ NC+G RN M FF+ + S
Sbjct: 174 CSLCEVEVLKYSKHCRVCDKCVDGFDHHCRWLNNCIGKRNYMRFFILMTS 223
>10_05_0114 +
9294747-9294788,9294883-9294996,9295066-9295173,
9295774-9296145,9296584-9296652,9296754-9296825,
9297070-9297198,9297690-9297770,9298622-9298807,
9299135-9299860
Length = 632
Score = 58.8 bits (136), Expect = 4e-09
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAI 436
C C +KHCR+C +CV FDHHC ++ NC+G RN FF+ + S +
Sbjct: 206 CSLCEVEVLQHSKHCRVCDKCVDGFDHHCRWLNNCIGKRNYKRFFILMASAVL 258
>04_04_0939 -
29530242-29531087,29531406-29531597,29531690-29531770,
29532300-29532428,29532579-29532650,29532761-29532829,
29533809-29533891,29534101-29534203,29534289-29534402,
29536230-29536274
Length = 577
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAI 436
C C +KHCR C +CV FDHHC ++ NCVG +N + FL +M+V++
Sbjct: 109 CTLCNAEVRKNSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYV-TFLCLMAVSL 160
>03_02_0110 -
5678057-5678794,5679279-5679470,5679971-5680087,
5680331-5680402,5680444-5680569,5681086-5681445,
5681944-5682057,5682158-5682199
Length = 586
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 19/72 (26%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHC-----PFIY--------------NCVGVRNR 472
C C +KHCR+C +CV FDHHC F++ NC+G RN
Sbjct: 166 CSLCEAEVLKNSKHCRVCDKCVDGFDHHCRVRYTSFVFPNGYTLSPLNNWLNNCIGKRNY 225
Query: 471 MWFFLFVMSVAI 436
FFL + S +
Sbjct: 226 KGFFLLMTSAVL 237
>03_02_0535 +
9277995-9278049,9278140-9278274,9278722-9278788,
9278948-9279044,9279156-9279252,9279640-9279680,
9280314-9280379,9281776-9281848,9282390-9282502,
9282916-9283089
Length = 305
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 564 RAKHCRICKRCVAYFDHHCPFIYNCVGV 481
R +HC CK V +DHHCP NC+ +
Sbjct: 125 RVRHCNCCKANVRGYDHHCPAFGNCIDI 152
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHC 508
C C +KHCR C +CV FDHHC
Sbjct: 153 CTLCNAEVRKFSKHCRSCDKCVDGFDHHC 181
>01_06_1317 -
36251231-36251341,36252514-36252609,36252879-36252956,
36253037-36253138,36254509-36254784
Length = 220
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 519 DHHCPFIYNCVGVRNRMWFFLFVMSVAINCTLSI 418
DHHC +I NCVG N F +FV+ + S+
Sbjct: 93 DHHCIWINNCVGHENYKIFLVFVLYAVVASLYSL 126
>02_05_1239 +
35174901-35174903,35175001-35175102,35175180-35175248,
35176466-35176561,35176724-35176813
Length = 119
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 519 DHHCPFIYNCVGVRNRMWFFLFVMSVAINCTLS 421
DHHC +I NCVG N F + V++ I S
Sbjct: 2 DHHCVWINNCVGYANYKSFIICVLNATIGSLYS 34
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -3
Query: 552 CRICKRCVAYFDHHCP---FIYNCV 487
CR C+ C F++HCP F YN V
Sbjct: 106 CRSCESCNNGFENHCPEGVFTYNSV 130
>01_06_0561 +
30251547-30252173,30252248-30252405,30253250-30254192,
30254271-30254438,30254546-30254857,30255498-30255557,
30255905-30255937,30256083-30256271
Length = 829
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 428 HCRSTLPVIVYYSRDSVCCICW-GYLK 351
HC PV+ +R + CICW Y+K
Sbjct: 537 HCDIHYPVVEMSNRSKLSCICWNSYMK 563
>05_03_0314 + 12203589-12204675,12207915-12208861
Length = 677
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -3
Query: 639 YYDKWKKRNIILSRLCHTCRCLRPLRAKHCRICKR 535
YY+ W++R H C+ P R+ C C R
Sbjct: 397 YYESWEERAFAEDSAGHLGGCIWPPRSYSCSFCGR 431
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,257,542
Number of Sequences: 37544
Number of extensions: 398781
Number of successful extensions: 920
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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