Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a10r
         (749 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   5.8  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   5.8  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 600  RLCHTCRCLRPLRAKHCRICKRCVAYFDHHC 508
            ++C T R L P  A  C+  ++   Y D HC
Sbjct: 1978 KICFTSRPL-PTCASQCKATEKAPKYVDVHC 2007



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 309 SVLHACMNLTTNEMFNYKRYP 247
           ++++A +N+T NE+  Y +YP
Sbjct: 309 AMVYAQVNMTLNEITPYDKYP 329


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 585 CRCLRPLRAKHCRICKRCVAYFDHHCPFIYNC 490
           C C   +  +HCR C+  + YF+      + C
Sbjct: 465 CSCKENVEGRHCRECR--LGYFNLDAENKFGC 494


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 309 SVLHACMNLTTNEMFNYKRYP 247
           ++++A +N+T NE+  Y +YP
Sbjct: 309 AMVYAQVNMTLNEITPYDKYP 329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 801,417
Number of Sequences: 2352
Number of extensions: 18410
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)