Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a10r
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81473-2|CAB03898.1| 240|Caenorhabditis elegans Hypothetical pr... 85 7e-17
Z81473-1|CAB03897.1| 302|Caenorhabditis elegans Hypothetical pr... 85 7e-17
AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical ... 85 7e-17
AL032657-2|CAA21738.1| 368|Caenorhabditis elegans Hypothetical ... 77 2e-14
AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical... 73 2e-13
Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z22180-12|CAH19086.1| 405|Caenorhabditis elegans Hypothetical p... 70 2e-12
Z22180-11|CAD54147.2| 403|Caenorhabditis elegans Hypothetical p... 70 2e-12
U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U23513-5|AAP68948.1| 214|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z69634-10|CAA93457.2| 431|Caenorhabditis elegans Hypothetical p... 60 1e-09
Z68507-8|CAA92831.2| 431|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U51999-3|AAA96084.1| 306|Caenorhabditis elegans Hypothetical pr... 58 7e-09
Z71177-7|CAI46554.1| 351|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z79600-1|CAB01873.1| 239|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U00046-3|AAC47045.2| 244|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z81525-3|CAB04258.1| 467|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 28 8.1
U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine rece... 28 8.1
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 28 8.1
AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z81473-2|CAB03898.1| 240|Caenorhabditis elegans Hypothetical
protein C17D12.1b protein.
Length = 240
Score = 84.6 bits (200), Expect = 7e-17
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = -3
Query: 597 LCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINCTLSI 418
+C C LRP RA HCR+CKRCV DHHCP++ NCVG N+ WF F+ V + S+
Sbjct: 52 MCTRCDSLRPPRAHHCRVCKRCVRKMDHHCPWVNNCVGEYNQKWFLQFIFYVGASSAYSL 111
Query: 417 YFACYC 400
C C
Sbjct: 112 LVLCLC 117
>Z81473-1|CAB03897.1| 302|Caenorhabditis elegans Hypothetical
protein C17D12.1a protein.
Length = 302
Score = 84.6 bits (200), Expect = 7e-17
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = -3
Query: 597 LCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINCTLSI 418
+C C LRP RA HCR+CKRCV DHHCP++ NCVG N+ WF F+ V + S+
Sbjct: 114 MCTRCDSLRPPRAHHCRVCKRCVRKMDHHCPWVNNCVGEYNQKWFLQFIFYVGASSAYSL 173
Query: 417 YFACYC 400
C C
Sbjct: 174 LVLCLC 179
>AL110487-6|CAB54433.2| 472|Caenorhabditis elegans Hypothetical
protein Y39E4B.7 protein.
Length = 472
Score = 84.6 bits (200), Expect = 7e-17
Identities = 36/105 (34%), Positives = 56/105 (53%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINCTLSIY 415
C TC+ RP R+ HC +C RC+ FDHHCP+++NCVG RN +FF F+ S++I+ + ++
Sbjct: 105 CVTCKFYRPPRSSHCSVCNRCIETFDHHCPWVHNCVGKRNYRYFFFFLCSLSIH-MMYVF 163
Query: 414 FACYCXXXXXXXXXXXXXXLEAITFCALGWILTCTSVLHACMNLT 280
F C+ L CA+ + C + + LT
Sbjct: 164 FLCFAYVWSGSDTNARDHILSPPYLCAIVLLALCAVLCVPVIGLT 208
>AL032657-2|CAA21738.1| 368|Caenorhabditis elegans Hypothetical
protein Y47H9C.2 protein.
Length = 368
Score = 76.6 bits (180), Expect = 2e-14
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAI 436
+ C TCR RP R HC IC CV FDHHCP++ NC+G+RN +F+ FV ++I
Sbjct: 164 KYCTTCRLYRPPRCSHCAICDNCVLMFDHHCPWVGNCIGLRNYTYFYRFVFCLSI 218
>AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical
protein F33D11.12 protein.
Length = 260
Score = 73.3 bits (172), Expect = 2e-13
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINCTLSIY 415
C C ++P RA HC +C+RC+ DHHCP++ NCVG N+ +F LF M +A+ ++Y
Sbjct: 86 CQKCASIKPDRAHHCSVCERCIRRMDHHCPWVNNCVGEGNQKFFVLFTMYIALLSMHALY 145
Query: 414 FACY 403
+ +
Sbjct: 146 WGVW 149
>Z29121-6|CAH19096.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 69.7 bits (163), Expect = 2e-12
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINC 430
R C C C++P R+ HC +C++CV FDHHCP++ NCV N +F LF+ I C
Sbjct: 134 RFCDKCCCIKPDRSHHCSMCEQCVLKFDHHCPWVNNCVNFGNYKYFILFLAYGFIFC 190
>Z29121-5|CAD54174.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 69.7 bits (163), Expect = 2e-12
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINC 430
R C C C++P R+ HC +C++CV FDHHCP++ NCV N +F LF+ I C
Sbjct: 132 RFCDKCCCIKPDRSHHCSMCEQCVLKFDHHCPWVNNCVNFGNYKYFILFLAYGFIFC 188
>Z22180-12|CAH19086.1| 405|Caenorhabditis elegans Hypothetical
protein ZK757.4b protein.
Length = 405
Score = 69.7 bits (163), Expect = 2e-12
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINC 430
R C C C++P R+ HC +C++CV FDHHCP++ NCV N +F LF+ I C
Sbjct: 134 RFCDKCCCIKPDRSHHCSMCEQCVLKFDHHCPWVNNCVNFGNYKYFILFLAYGFIFC 190
>Z22180-11|CAD54147.2| 403|Caenorhabditis elegans Hypothetical
protein ZK757.4a protein.
Length = 403
Score = 69.7 bits (163), Expect = 2e-12
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINC 430
R C C C++P R+ HC +C++CV FDHHCP++ NCV N +F LF+ I C
Sbjct: 132 RFCDKCCCIKPDRSHHCSMCEQCVLKFDHHCPWVNNCVNFGNYKYFILFLAYGFIFC 188
>U40415-9|AAK39249.3| 281|Caenorhabditis elegans Hypothetical
protein K02G10.1 protein.
Length = 281
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = -3
Query: 627 WKKRNIILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVM 448
W+ N S+ C TC P R+ HC +CK CV DHHC CVG+ N+ +F +F+
Sbjct: 122 WEPANESGSKFCFTCNKEAPQRSHHCPLCKMCVLRKDHHCFITGACVGLGNQRYFMVFLF 181
Query: 447 SVAINCTLSI 418
AI T+++
Sbjct: 182 WCAIGLTIAM 191
>U23513-5|AAP68948.1| 214|Caenorhabditis elegans Hypothetical
protein D2021.2b protein.
Length = 214
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINCTL 424
+ C TC + KHC +C CV FDHHCP++ +CV RN F +FV+SV+++ +
Sbjct: 48 KYCFTCFIRKMDHTKHCAVCGFCVNNFDHHCPWLNSCVTRRNMREFIMFVISVSVSSAI 106
>U23513-4|AAP68947.1| 322|Caenorhabditis elegans Hypothetical
protein D2021.2a protein.
Length = 322
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINCTL 424
+ C TC + KHC +C CV FDHHCP++ +CV RN F +FV+SV+++ +
Sbjct: 156 KYCFTCFIRKMDHTKHCAVCGFCVNNFDHHCPWLNSCVTRRNMREFIMFVISVSVSSAI 214
>Z69634-10|CAA93457.2| 431|Caenorhabditis elegans Hypothetical
protein M18.8 protein.
Length = 431
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINC 430
+ C C + R+ HC C RC DHHCP+I NCVG RN +F F+ + C
Sbjct: 106 QFCVPCNGFKVPRSHHCSKCDRCCMKMDHHCPWINNCVGHRNHQYFLRFLFFSVVGC 162
>Z68507-8|CAA92831.2| 431|Caenorhabditis elegans Hypothetical
protein M18.8 protein.
Length = 431
Score = 60.5 bits (140), Expect = 1e-09
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAINC 430
+ C C + R+ HC C RC DHHCP+I NCVG RN +F F+ + C
Sbjct: 106 QFCVPCNGFKVPRSHHCSKCDRCCMKMDHHCPWINNCVGHRNHQYFLRFLFFSVVGC 162
>Z83104-3|CAB05476.1| 295|Caenorhabditis elegans Hypothetical
protein F09B12.2 protein.
Length = 295
Score = 58.0 bits (134), Expect = 7e-09
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAI 436
CH+C + PLRA HC +C C+ DHHC F CVG N+ +F V+++ I
Sbjct: 105 CHSCHSMSPLRAHHCPVCDVCILRRDHHCSFGAVCVGHFNQRYFVAAVINLFI 157
>U51999-3|AAA96084.1| 306|Caenorhabditis elegans Hypothetical
protein C43H6.7 protein.
Length = 306
Score = 58.0 bits (134), Expect = 7e-09
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAI 436
C C + A HC +C++CV DHHC +I CVG+ N FFLF+ ++ +
Sbjct: 105 CSKCNYWKSDNAHHCSVCEKCVLGMDHHCIWINQCVGLHNHRHFFLFIANLTL 157
>Z71177-7|CAI46554.1| 351|Caenorhabditis elegans Hypothetical
protein AC3.10 protein.
Length = 351
Score = 56.4 bits (130), Expect = 2e-08
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = -3
Query: 600 RLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVM 448
+ C+ C ++P RA+HC C +C +DHHCP+I CV N +F L+++
Sbjct: 154 KYCYECGHIKPDRARHCSSCGKCCIKYDHHCPWINMCVTHVNYKYFLLYII 204
>AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical
protein T22E7.2 protein.
Length = 257
Score = 56.0 bits (129), Expect = 3e-08
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = -3
Query: 636 YDKWKKRNIILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFL 457
Y+ R++I + C C KHC+ C C+ FDHHC ++ NC+G +N F +
Sbjct: 25 YESEAGRHVITNSFCSICEVRTYRETKHCKRCNFCIDDFDHHCVWLNNCIGGKNYRPFVV 84
Query: 456 FVMSVAI 436
V+ V +
Sbjct: 85 LVICVNV 91
>Z79600-1|CAB01873.1| 239|Caenorhabditis elegans Hypothetical
protein F59C6.2 protein.
Length = 239
Score = 55.2 bits (127), Expect = 5e-08
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -3
Query: 594 CHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSVAI 436
C C + HC+ C +C+ DHHCP I CVG N+ FFLF+ + I
Sbjct: 42 CIKCNNWKGPSTSHCKACDKCIYRMDHHCPHIGQCVGAHNQSHFFLFLFYLQI 94
>U00046-3|AAC47045.2| 244|Caenorhabditis elegans Hypothetical
protein R13F6.5 protein.
Length = 244
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = -3
Query: 669 TYYRAIRQIPYYDKWKKRNIILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNC 490
T R + ++ + DK K ++ C C +P R HCR C CV DHHCP + C
Sbjct: 64 TKCRDVEKVEHCDKEIKEDV-----CQLCNYRKPPRWHHCRRCNLCVHRMDHHCPILQLC 118
Query: 489 VGVRNRMWFFLFVM 448
+ N +F LF++
Sbjct: 119 IHSGNHKYFLLFLV 132
>AF125443-1|AAD12801.1| 783|Caenorhabditis elegans Hypothetical
protein H32C10.3 protein.
Length = 783
Score = 54.8 bits (126), Expect = 6e-08
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -3
Query: 606 LSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNCVGVRNRMWFFLFVMSV 442
+ R C TC + + HC C +CV FDHHCP+I+ CV +N F F +++
Sbjct: 539 IDRYCFTCWIPKTSSSHHCSQCDKCVDGFDHHCPWIHKCVYRKNLRAFVFFCLTI 593
>Z81525-3|CAB04258.1| 467|Caenorhabditis elegans Hypothetical
protein F33A8.4 protein.
Length = 467
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 621 KRNIILSRLCHTCRCLRPLRAKHCRICKRCVAYFDHHCPFIYNC 490
+RN+ R C C + + HC C +CV HC C
Sbjct: 413 ERNVHCDR-CQACTSVEQGKWNHCEKCDKCVKPRYVHCAQCARC 455
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical protein
T20G5.5 protein.
Length = 1234
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 421 RQCA--VDRNAHHEQEEPHSIANSDTVVDKRAVMVKIRY 531
RQC +D A HE EP S+ + V+D + ++++ Y
Sbjct: 1181 RQCKSQMDNGAEHEFIEPQSLIRNLRVIDNQKKLMQLSY 1219
>U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform a protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -3
Query: 327 WILTCTSVLHACMNLTTNEMFNYKRYPYLRD 235
W L T+ + +C+N N + +PY+R+
Sbjct: 33 WRLIITAAVVSCLNAVENSVLGIGEWPYMRE 63
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = -3
Query: 327 WILTCTSVLHACMNLTTNEMFNYKRYPYLRD 235
W L T+ + +C+N N + +PY+R+
Sbjct: 33 WRLIITAAVVSCLNAVENSVLGIGEWPYMRE 63
>AL132848-5|CAB60389.2| 702|Caenorhabditis elegans Hypothetical
protein Y47H10A.1 protein.
Length = 702
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 367 AGAT*SYYFLCPRLDFDLHFGAARLYELNHK 275
AG + C L +++HF A Y+ NHK
Sbjct: 550 AGGCDDHDTFCTNLQYEIHFRATDSYDSNHK 580
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,475,595
Number of Sequences: 27780
Number of extensions: 386092
Number of successful extensions: 908
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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