Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a10f
(628 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 55 7e-09
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 50 2e-07
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 48 1e-06
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 36 0.004
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 34 0.015
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 33 0.026
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 30 0.31
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.31
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 29 0.73
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 29 0.73
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 1.7
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 2.2
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 27 2.9
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 2.9
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.9
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 3.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 3.9
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 26 5.1
SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein L21|Sch... 25 6.8
SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces po... 25 6.8
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 25 9.0
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 55.2 bits (127), Expect = 7e-09
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
+F A GE+ ++ L+ ++V NA D+ G T HWA+L+ + + ++L+E A V+
Sbjct: 4 LFLAASQGELDTVKNLISSEKIDV-NATDEGGATALHWAALNQQIPICKFLLEHGADVN- 61
Query: 518 SCLGTQGPRPIHWACRKG 571
+ G PIHWA ++G
Sbjct: 62 AIGGDLQAAPIHWAAKRG 79
Score = 29.1 bits (62), Expect = 0.55
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +2
Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGH 574
++ RD +TP WAS G+ + L+ A D+ P+HW+ G+
Sbjct: 127 VDLRDDQQHTPLMWASYHGNEPITNCLLRWGA--DVLATDEDKMTPLHWSIVGGN 179
Score = 28.7 bits (61), Expect = 0.73
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 440 PAHWASLDGSVAVMRYLVERSA 505
P HWA+ GSV + YLV+ A
Sbjct: 71 PIHWAAKRGSVKTVHYLVQHGA 92
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 50.4 bits (115), Expect = 2e-07
Identities = 30/96 (31%), Positives = 52/96 (54%)
Frame = +2
Query: 296 TITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVA 475
TIT+ + LH A G +S ++ L +K E++ +D G TP H A+ G +
Sbjct: 101 TITTRGGQTCLHY----AAGKGRLSIVQLLCDK-APELIRKKDLQGQTPLHRAAAVGKIQ 155
Query: 476 VMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
V++YL+ + AP++ S + G P+H+A +GH +
Sbjct: 156 VVKYLISQRAPLNTS--DSYGFTPLHFALAEGHPDV 189
Score = 28.3 bits (60), Expect = 0.96
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
+ A G++ ++ L+ + LN D +G+TP H+A +G V LV A
Sbjct: 145 LHRAAAVGKIQVVKYLISQRAP--LNTSDSYGFTPLHFALAEGHPDVGVELVRAGA 198
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVER 499
LNA D TP HWA G V + +L+++
Sbjct: 30 LNAVDDDKRTPLHWACSVGKVNTIYFLLKQ 59
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 48.0 bits (109), Expect = 1e-06
Identities = 26/87 (29%), Positives = 47/87 (54%)
Frame = +2
Query: 323 DLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERS 502
D+ LI+ A R+ + ++ ++EK E L+ RD++G + H AS +G +AV++ ++
Sbjct: 2 DVDDLIY-ACRAADEELLDEIIEKCPQE-LSRRDENGNSGLHMASANGHIAVVQKIIPYL 59
Query: 503 APVDLSCLGTQGPRPIHWACRKGHASI 583
++ G +HWA GHA I
Sbjct: 60 NKEVINAQNESGNTAMHWAALNGHAEI 86
Score = 43.6 bits (98), Expect = 2e-05
Identities = 16/50 (32%), Positives = 33/50 (66%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVE 496
A +G ++ +++++ L EV+NA+++ G T HWA+L+G + + L+E
Sbjct: 43 ASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAEICKLLLE 92
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 344 EAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
EA R G++ ++ LVE + N DQ Y+P ASL G V+++L+E A
Sbjct: 58 EACRRGDLEVVKSLVENYNTPI-NQVDQFDYSPLVLASLCGHEPVVKFLLENGA 110
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 34.3 bits (75), Expect = 0.015
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +2
Query: 413 NARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRK 568
NA D++GYTP H A G +++ LVER D++ G P+ + C K
Sbjct: 31 NAADENGYTPIHAAVSYGHSDLLKILVERGG--DINIRDQDGETPL-FVCEK 79
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 33.5 bits (73), Expect = 0.026
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPI 550
+N RD GYTP H+ASL + L+ A D+ +G G +PI
Sbjct: 888 VNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDV--IGASGKKPI 932
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 29.9 bits (64), Expect = 0.31
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 350 VRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASL 460
+RS + E+ER++ LG+++LN+R H P +ASL
Sbjct: 483 LRSIKKPELERIIVDLGMDILNSRSTH--LPPLFASL 517
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.31
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
Frame = +2
Query: 212 PPPCTMAAEESLPQGS----PMSPDAPVAPP 292
PP +A SLP G+ P+ P AP+APP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 203 LPQPPPCTMAAEESLPQGSPMS--PDAPVAPP 292
+P PP +A SLP +P S AP APP
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 28.7 bits (61), Expect = 0.73
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 422 DQHGYTPAHWASLDGSVAVMRYLVERSAPV 511
D+ G+T HWA+ G++ +M L++ A V
Sbjct: 234 DEDGHTALHWAAAMGNLEMMHALLQAGANV 263
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 28.7 bits (61), Expect = 0.73
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 218 PCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQLI 340
P A E LP G+ + PD + P + N Y D++ ++
Sbjct: 20 PVIEAPTEKLPDGTEIEPDLSLPNPNGVECDNLYLDMNGIV 60
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 149 AVSSKVYPSPGAARGVWALPQPPPCTMAAE-ESLPQG--SPMSPDAPVAPPR 295
A+S P A V ++PQPP + E S+PQ +P++P+ P P R
Sbjct: 571 ALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQR 622
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 200 ALPQPPPCTMAAEE---SLPQGSPMSPDAPVAPPR 295
++PQPP + E P +P++P+ P AP R
Sbjct: 513 SVPQPPAAPVVPEAPSVHQPPAAPVAPEVPSAPQR 547
Score = 26.2 bits (55), Expect = 3.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 200 ALPQPPPCTMAAE-ESLPQ--GSPMSPDAPVAP 289
++PQPP +A E S+PQ P+ P+AP P
Sbjct: 603 SVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVP 635
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 200 ALPQPPPCTMAAE-ESLPQ--GSPMSPDAPVAP 289
++PQPP + E S+PQ P+ P+AP P
Sbjct: 633 SVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVP 665
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -2
Query: 504 ADLSTRYRMTATLPSSDAQCAGV*PCWSRAFKTSTPSFSTRRSISDTSP 358
AD+ R+ + +PS+D +C+ + + ST R +IS T+P
Sbjct: 15 ADIHRALRIPSPIPSTDYECSDYASTIASISRESTMRNFNRSNISSTAP 63
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 404 EVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGP 541
+V + D G+T HWA G + +++ L+ +A + + +Q P
Sbjct: 239 QVNSVIDDDGHTSLHWACSMGHIEMIKLLLRANADIGVCNRLSQTP 284
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = -1
Query: 223 ARGRLWQRPHAARRPRTWIYLATHGEADAPRYSRVLAVRHDQRLFTENLY 74
AR R W A + +W+Y AP +RHD+ + N+Y
Sbjct: 199 ARARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKDIIVPNVY 248
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 2.9
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +2
Query: 200 ALPQPPPCTMAAEESLPQGSPMSPDAPVAPPRTITSFN 313
A P PPP + P +P S P PP T+ +
Sbjct: 1880 AAPPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAIS 1917
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +2
Query: 98 LVVADCENSAVAGGVGLAVSSKVYPSPGAARGVWALP 208
L++ C + + GG+ A++ +Y + +W LP
Sbjct: 66 LIIVACGSFIITGGIEFAIAYGMYKKTETSVRLWRLP 102
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 3.9
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +2
Query: 149 AVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
A SS + P P A GV P PPP G P P APP
Sbjct: 1173 APSSGIPPVPKPAAGV--PPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 200 ALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
A P P P A +P G+P P VA P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -1
Query: 127 SRVLAVRHDQRLFTENLYTAIQASLNFDFFYTTQSSLDLR 8
S +LAVRHD+++F+E+ + +F T+ D+R
Sbjct: 33 SLILAVRHDKQVFSEDYRQVVD-----QYFETSPKKNDIR 67
>SPAC959.08 |rpl2102|rpl21-2, rpl21|60S ribosomal protein
L21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 160
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 189 RAAPGLGYTLLLTARPTPPATAEF 118
+ A G T+ L +P PPATA F
Sbjct: 117 KEAKAQGKTVQLRRQPAPPATAHF 140
>SPCC306.03c |cnd2||condensin subunit Cnd2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 742
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 195 TPRAAPGLGYTLLLTARPTPPATAEFSQSA 106
TP ++ G G LLLTAR P +++ A
Sbjct: 599 TPPSSSGFGDNLLLTARLAKPDMLNYAKRA 628
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -2
Query: 183 APGLGYTLL-LTARPTPPATAEFSQSA 106
+P LG TL+ RPTP EF++SA
Sbjct: 1267 SPKLGKTLMGQDIRPTPDDVPEFNESA 1293
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,738,164
Number of Sequences: 5004
Number of extensions: 59100
Number of successful extensions: 200
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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