Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a10f
(628 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g12320.1 68418.m01448 ankyrin repeat family protein contains ... 56 2e-08
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 50 2e-06
At4g19150.1 68417.m02825 ankyrin repeat family protein contains ... 48 4e-06
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 48 7e-06
At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein ... 46 2e-05
At2g14250.1 68415.m01592 ankyrin repeat family protein contains ... 45 5e-05
At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyri... 42 3e-04
At3g12360.1 68416.m01541 ankyrin repeat family protein contains ... 42 3e-04
At5g60070.1 68418.m07532 ankyrin repeat family protein contains ... 38 0.005
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 38 0.005
At2g31820.1 68415.m03886 ankyrin repeat family protein contains ... 37 0.010
At2g03430.1 68415.m00301 ankyrin repeat family protein contains ... 37 0.010
At5g07840.1 68418.m00900 ankyrin repeat family protein contains ... 37 0.013
At2g01680.1 68415.m00095 ankyrin repeat family protein contains ... 37 0.013
At3g04710.1 68416.m00505 ankyrin repeat family protein contains ... 36 0.022
At2g24600.3 68415.m02939 ankyrin repeat family protein contains ... 36 0.029
At2g24600.2 68415.m02938 ankyrin repeat family protein contains ... 36 0.029
At2g24600.1 68415.m02937 ankyrin repeat family protein contains ... 36 0.029
At1g10340.2 68414.m01165 ankyrin repeat family protein contains ... 36 0.029
At1g10340.1 68414.m01164 ankyrin repeat family protein contains ... 36 0.029
At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing... 34 0.067
At1g34050.1 68414.m04221 ankyrin repeat family protein contains ... 33 0.12
At5g54710.1 68418.m06813 ankyrin repeat family protein contains ... 33 0.16
At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH) domain... 32 0.27
At1g14000.1 68414.m01652 protein kinase family protein / ankyrin... 32 0.36
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 31 0.47
At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase (L... 31 0.47
At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family... 31 0.47
At3g03380.1 68416.m00336 DegP protease, putative contains simila... 31 0.63
At1g77520.1 68414.m09027 O-methyltransferase family 2 protein si... 31 0.83
At5g15500.2 68418.m01815 ankyrin repeat family protein contains ... 30 1.1
At5g15500.1 68418.m01814 ankyrin repeat family protein contains ... 30 1.1
At4g06526.1 68417.m00938 hypothetical protein 30 1.1
At2g40200.1 68415.m04943 basic helix-loop-helix (bHLH) family pr... 30 1.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 30 1.1
At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family... 30 1.1
At1g01730.1 68414.m00092 expressed protein 30 1.1
At4g03480.1 68417.m00475 ankyrin repeat family protein contains ... 30 1.4
At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family... 30 1.4
At4g14390.1 68417.m02219 ankyrin repeat family protein contains ... 29 1.9
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 29 1.9
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 29 1.9
At1g58250.1 68414.m06624 SABRE, putative similar to SABRE (GI:71... 29 1.9
At1g52550.1 68414.m05932 expressed protein 29 1.9
At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing... 29 1.9
At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger) fa... 29 2.5
At4g18570.1 68417.m02749 proline-rich family protein common fami... 29 2.5
At1g04660.1 68414.m00463 glycine-rich protein 29 2.5
At5g60210.1 68418.m07547 cytoplasmic linker protein-related cont... 29 3.3
At5g11730.1 68418.m01370 expressed protein contains Pfam profile... 29 3.3
At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR cla... 29 3.3
At3g52250.1 68416.m05742 myb family transcription factor contain... 29 3.3
At3g18670.1 68416.m02371 ankyrin repeat family protein contains ... 29 3.3
At3g16940.1 68416.m02165 calmodulin-binding protein similar to a... 29 3.3
At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) / po... 29 3.3
At1g61080.1 68414.m06877 proline-rich family protein 29 3.3
At1g11740.1 68414.m01347 ankyrin repeat family protein contains ... 29 3.3
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 28 4.4
At5g50140.1 68418.m06210 ankyrin repeat family protein contains ... 28 4.4
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 28 4.4
At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /... 28 4.4
At2g20260.1 68415.m02367 photosystem I reaction center subunit I... 28 4.4
At2g13790.1 68415.m01522 leucine-rich repeat family protein / pr... 28 4.4
At1g77530.1 68414.m09028 O-methyltransferase family 2 protein si... 28 4.4
At1g32800.1 68414.m04043 PHD finger protein-related contains low... 28 4.4
At1g05640.1 68414.m00585 ankyrin repeat family protein contains ... 28 4.4
At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identica... 28 5.8
At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing... 28 5.8
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 28 5.8
At5g11990.1 68418.m01402 proline-rich family protein contains pr... 28 5.8
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 28 5.8
At3g04500.1 68416.m00477 RNA recognition motif (RRM)-containing ... 28 5.8
At1g35625.1 68414.m04426 protease-associated zinc finger (C3HC4-... 28 5.8
At5g65950.1 68418.m08302 expressed protein 27 7.7
At5g54610.1 68418.m06800 ankyrin repeat family protein contains ... 27 7.7
At4g35750.1 68417.m05074 Rho-GTPase-activating protein-related c... 27 7.7
At1g03670.1 68414.m00346 ankyrin repeat family protein contains ... 27 7.7
>At5g12320.1 68418.m01448 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 144
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
+ EA R ++ ++ L G+ L++RD G T H A+ +G + ++ YL+ S VD+
Sbjct: 15 LLEAARYNDIDDLRTLASD-GLS-LHSRDSQGRTALHMAAANGHMTIVEYLI--SEGVDI 70
Query: 518 SCLGTQGPRPIHWACRKGHASI 583
+ L + P+HWAC GH +
Sbjct: 71 NALNDENNAPLHWACLNGHVEV 92
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
A +G ++ +E L+ + GV++ NA + P HWA L+G V V++ L+ A + L
Sbjct: 51 AAANGHMTIVEYLISE-GVDI-NALNDENNAPLHWACLNGHVEVVKRLILAGASLSL 105
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +2
Query: 353 RSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGT 532
R GEV + + +E G+ V NARD G TP HWA G + + + LV+++A D++
Sbjct: 242 REGEVENLLKSIES-GIPV-NARDSEGRTPLHWAIDRGHLNIAKVLVDKNA--DVNAKDN 297
Query: 533 QGPRPIHWA 559
+G P+H+A
Sbjct: 298 EGQTPLHYA 306
Score = 31.9 bits (69), Expect = 0.36
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
A+ G ++ + LV+K +V NA+D G TP H+A + A+ +LV+++A
Sbjct: 273 AIDRGHLNIAKVLVDK-NADV-NAKDNEGQTPLHYAVVCDREAIAEFLVKQNA 323
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 446 HWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
H + +G V + +E PV+ ++G P+HWA +GH +I
Sbjct: 238 HGFAREGEVENLLKSIESGIPVNAR--DSEGRTPLHWAIDRGHLNI 281
>At4g19150.1 68417.m02825 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 243
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = +2
Query: 320 SDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVER 499
+DLH A RSG+++ ++ ++ + V N+RD+H TP H A+ G V+ YL +
Sbjct: 18 ADLHS----AARSGDLAAVQSIISSNPLAV-NSRDKHSRTPLHLAAWAGHNEVVSYLCKN 72
Query: 500 SAPVDLSCLGTQGPRPIHWACRKGHASI 583
A V + G IH+A +KGH +
Sbjct: 73 KADVGAAAGDDMG--AIHFASQKGHLEV 98
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 431 GYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPI 550
G TP H+A+ +++YLV++ A V + + P +
Sbjct: 116 GLTPLHYAAQGSHFEIVKYLVKKGASVRATTKAGKSPADV 155
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Frame = +2
Query: 278 PVAPPRTITSFNQYSDLHQLIFEAV----RSGEVSEIERLVEKLGVEVLNARDQHGYTPA 445
P+ P + + + SD ++L +A+ R GEV + + +E G+ V NARD G TP
Sbjct: 199 PMGPVFSSLVYEEESD-NELKIDAIHAFAREGEVENLLKCIEN-GIPV-NARDSEGRTPL 255
Query: 446 HWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWA 559
HWA G + V LV+++A D++ +G +H+A
Sbjct: 256 HWAIDRGHLNVAEALVDKNA--DVNAKDNEGQTSLHYA 291
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 446 HWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
H + +G V + +E PV+ ++G P+HWA +GH ++
Sbjct: 223 HAFAREGEVENLLKCIENGIPVNAR--DSEGRTPLHWAIDRGHLNV 266
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
A+ G ++ E LV+K +V NA+D G T H+A + A+ +LV++ A
Sbjct: 258 AIDRGHLNVAEALVDK-NADV-NAKDNEGQTSLHYAVVCEREALAEFLVKQKA 308
>At5g20350.1 68418.m02421 zinc finger (DHHC type) family protein /
ankyrin repeat family protein similar to patsas protein
[Drosophila melanogaster] GI:6002770; contains Pfam
profiles PF00023: Ankyrin repeat, PF01529: DHHC zinc
finger domain
Length = 592
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
++ A G++ ++ RLVE G V + D GY W++L+ VAV +YL+E D+
Sbjct: 35 VYTAAAYGDLEKLHRLVECEGSSV-SEPDALGYYALQWSALNNRVAVAQYLIEHGG--DV 91
Query: 518 SCLGTQGPRPIHWACRKG 571
+ G +HW+ +G
Sbjct: 92 NATDHTGQTALHWSAVRG 109
Score = 37.5 bits (83), Expect = 0.007
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 335 LIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVER-SAPV 511
L + AVR G + E L+++ G V +A D +GY H A+ G A + ++V + +A
Sbjct: 102 LHWSAVR-GAIQVAELLLQE-GARV-DATDMYGYQATHVAAQYGQTAFLCHVVSKWNADP 158
Query: 512 DLSCLGTQGPRPIHWACRKGHA 577
D+ G P+HWA KG A
Sbjct: 159 DVP--DNDGRSPLHWAAYKGFA 178
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 419 RDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGH 574
+D+ G TP HWA++ G++ LV+ DL G P A K H
Sbjct: 194 QDKEGCTPLHWAAIRGNLEACTVLVQAGKKEDLMITDKTGLTPAQLAAEKNH 245
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +2
Query: 329 HQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAP 508
+Q A + G+ + + +V K + + D G +P HWA+ G +R L+ A
Sbjct: 132 YQATHVAAQYGQTAFLCHVVSKWNADP-DVPDNDGRSPLHWAAYKGFADSIRLLLFLDAY 190
Query: 509 VDLSCLGTQGPRPIHWACRKGH 574
+G P+HWA +G+
Sbjct: 191 RGRQ--DKEGCTPLHWAAIRGN 210
>At2g14250.1 68415.m01592 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 241
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/82 (26%), Positives = 42/82 (51%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
+F A G++ +++ VE G V + D +G+ WA+L+ S+ V +Y+++ D+
Sbjct: 28 VFSASAYGDLHQLKHFVEHNGSSV-SLPDDNGFYALQWAALNNSLHVAQYIIQHGG--DV 84
Query: 518 SCLGTQGPRPIHWACRKGHASI 583
+ P+HWA KG +
Sbjct: 85 NSADNIQQTPLHWAAVKGSIDV 106
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHAS 580
+N+ D TP HWA++ GS+ V L++ A ++ + G R +H A + G +
Sbjct: 84 VNSADNIQQTPLHWAAVKGSIDVADLLLQHGARIE--AVDVNGFRAVHVASQYGQTA 138
Score = 34.7 bits (76), Expect = 0.051
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKG 571
+ A D +G+ H AS G A + +++ A D + L +G P+HWA G
Sbjct: 117 IEAVDVNGFRAVHVASQYGQTAFVNHIIVDYA-ADYNALDIEGRSPLHWAAYNG 169
Score = 31.9 bits (69), Expect = 0.36
Identities = 21/74 (28%), Positives = 34/74 (45%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCL 526
A + G+ + + ++ + NA D G +P HWA+ +G +R L+ R D C
Sbjct: 131 ASQYGQTAFVNHIIVDYAADY-NALDIEGRSPLHWAAYNGFTETVRLLLFR----DACC- 184
Query: 527 GTQGPRPIHWACRK 568
P+HWA K
Sbjct: 185 -----TPLHWAVIK 193
Score = 30.7 bits (66), Expect = 0.83
Identities = 15/49 (30%), Positives = 20/49 (40%)
Frame = +2
Query: 437 TPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
TP HWA + +V LV +L G P+ A KGH +
Sbjct: 185 TPLHWAVIKENVEACTLLVHAGTKEELILKDNTGSTPLKLASDKGHRQL 233
>At3g24530.1 68416.m03080 AAA-type ATPase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00023
ankyrin repeat, PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 481
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGY-TPAHWASLDGSVAVMRYLV--ERSAP 508
I + SG++ ++RL+ K +LN R+ Y TP H ++ +G+V +++YL+ S
Sbjct: 19 IHDCALSGDLIALQRLL-KDNPSLLNERNPVMYHTPLHVSAGNGNVDIVKYLLAWTGSDK 77
Query: 509 VDLSCLGTQGPRPIHWACRKG 571
V+L + T G P+H A + G
Sbjct: 78 VELEAMNTYGETPLHMAAKNG 98
>At3g12360.1 68416.m01541 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 590
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +2
Query: 272 DAPVAPPRTITSFNQYSDLHQL-IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAH 448
DA VA R + N+ ++L + +F A G + ++ L++ E + +++ GY P H
Sbjct: 111 DAEVAEIRA-SIVNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLH 169
Query: 449 WASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
A++ G A++ L++ A + G P+ A +GH +
Sbjct: 170 IAAIQGHHAIVEVLLDHDATLS-QTFGPSNATPLVSAAMRGHTEV 213
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = +2
Query: 344 EAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSC 523
E + SGE E + V ++ ++N ++ G T A+ G + V++ L++ S+ ++
Sbjct: 102 EGILSGE--EFDAEVAEIRASIVNEVNELGETALFTAADKGHLDVVKELLKYSSRESIAK 159
Query: 524 LGTQGPRPIHWACRKGHASI 583
G P+H A +GH +I
Sbjct: 160 KNRSGYDPLHIAAIQGHHAI 179
>At5g60070.1 68418.m07532 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 548
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCL 526
A + GE+ + L+E+ E+ D T H A+ G V V+ YL+E + +
Sbjct: 115 AAKQGELDVLRVLMEE-HPELSMTVDLSNTTALHTAAAQGHVEVVEYLLEAAGSSLAAIA 173
Query: 527 GTQGPRPIHWACRKGHASI 583
+ G +H A R GHA +
Sbjct: 174 KSNGKTALHSAARNGHAEV 192
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 37.9 bits (84), Expect = 0.005
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
IFEA R+G+V + LVE GV V NARD+ ++A L G + R L+E A
Sbjct: 40 IFEASRAGDVDRLRYLVE-TGVNV-NARDRWDSVALYYACLAGHIDSARLLLENGA 93
>At2g31820.1 68415.m03886 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 662
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKLG---VEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
A R+G +S+++ L+ G E+L+ ++ G TP + A+ +G V+ +++
Sbjct: 158 AARTGNLSKVKELIRGCGDELKELLSKQNLEGETPLYTAAENGHSIVVEEMLKHMDLETA 217
Query: 518 SCLGTQGPRPIHWACRKGHASI 583
S G P H A ++GH +
Sbjct: 218 SIAARNGFDPFHVAAKQGHLEV 239
>At2g03430.1 68415.m00301 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 240
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +2
Query: 407 VLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
V+N++D G+ P H A+ G+ ++ L+ R A D++ G +H+A KG I
Sbjct: 75 VINSKDDEGWAPLHSAASIGNAELVEVLLTRGA--DVNAKNNGGRTALHYAASKGRLEI 131
Score = 32.3 bits (70), Expect = 0.27
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 371 EIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVD 514
EI +L+ G ++ N D+ G TP H A+ G + V +L+E A +D
Sbjct: 130 EIAQLLLTHGAKI-NITDKVGCTPLHRAASVGKLEVCEFLIEEGAEID 176
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
+ A G +E L+ + G +V NA++ G T H+A+ G + + + L+ A +++
Sbjct: 87 LHSAASIGNAELVEVLLTR-GADV-NAKNNGGRTALHYAASKGRLEIAQLLLTHGAKINI 144
Query: 518 SCLGTQGPRPIHWACRKGHASI 583
+ G P+H A G +
Sbjct: 145 T--DKVGCTPLHRAASVGKLEV 164
>At5g07840.1 68418.m00900 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 175
Score = 36.7 bits (81), Expect = 0.013
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Frame = +2
Query: 353 RSGEVSEIERLVEKLGVEVLNAR----DQHGYTPAHWASLDGSVAVMRYLVERSAPVDLS 520
R G++ ++ L+++ G +V NA G TP H A+ G + VM L+ER A ++
Sbjct: 40 REGDLKAVKELLDQ-GADV-NALACGPKSKGMTPLHLAAKGGHIEVMDLLLERGANMEAR 97
Query: 521 CLGTQGPRPIHWACRK 568
G G P+H A ++
Sbjct: 98 TSGACGWTPLHAAAKE 113
>At2g01680.1 68415.m00095 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 532
Score = 36.7 bits (81), Expect = 0.013
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Frame = +2
Query: 329 HQLIFEAVRSGEVSEIERLVEKLG--------------VEVLNARDQHGYTPAHWASLDG 466
HQ F +VRSG++S++++LV+ L E+++ ++ G T + ++ +
Sbjct: 11 HQAFFSSVRSGDLSQLQQLVDNLTGDELIDESSPCSAVAELMSVQNDAGETAVYISAAEN 70
Query: 467 SVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
+ RYL+ S+ + H A ++GH I
Sbjct: 71 LEDIFRYLIRFSSLETVKIRSKSDMNAFHVAAKRGHLGI 109
>At3g04710.1 68416.m00505 ankyrin repeat family protein contains
Pfam profile: PF00023 ankyrin repeat
Length = 456
Score = 35.9 bits (79), Expect = 0.022
Identities = 26/97 (26%), Positives = 45/97 (46%)
Frame = +2
Query: 293 RTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSV 472
+T+ S + L F A R G+ L+E+L + +A+D+ G TP A+ G +
Sbjct: 45 KTVESIKDANKRGALHF-AAREGQTEICRYLLEELKLNA-DAKDETGDTPLVHAARQGQI 102
Query: 473 AVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
++YL+E+ A D + G +H A G +
Sbjct: 103 ETVKYLLEQGA--DPNIASELGATALHHAAGTGEIEL 137
>At2g24600.3 68415.m02939 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 601
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = +2
Query: 290 PRTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGS 469
P ++S N Y D + A G+V+ + ++++ G+E+ +AR+ TP H A +
Sbjct: 61 PSLLSSRNAYGDTP--LHLAALLGDVNIVMQMLDT-GLELYSARNNKNQTPLHLAFVSIF 117
Query: 470 VAVMRYLVERSAPVDL 517
+ +++VE++ VDL
Sbjct: 118 MEAAKFIVEKTNSVDL 133
>At2g24600.2 68415.m02938 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 548
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = +2
Query: 290 PRTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGS 469
P ++S N Y D + A G+V+ + ++++ G+E+ +AR+ TP H A +
Sbjct: 61 PSLLSSRNAYGDTP--LHLAALLGDVNIVMQMLDT-GLELYSARNNKNQTPLHLAFVSIF 117
Query: 470 VAVMRYLVERSAPVDL 517
+ +++VE++ VDL
Sbjct: 118 MEAAKFIVEKTNSVDL 133
>At2g24600.1 68415.m02937 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 548
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = +2
Query: 290 PRTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGS 469
P ++S N Y D + A G+V+ + ++++ G+E+ +AR+ TP H A +
Sbjct: 61 PSLLSSRNAYGDTP--LHLAALLGDVNIVMQMLDT-GLELYSARNNKNQTPLHLAFVSIF 117
Query: 470 VAVMRYLVERSAPVDL 517
+ +++VE++ VDL
Sbjct: 118 MEAAKFIVEKTNSVDL 133
>At1g10340.2 68414.m01165 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 574
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +2
Query: 290 PRTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGS 469
P ++S N Y + + A G+V+ + +++E G+EV +AR+ + +TP H A S
Sbjct: 61 PSLVSSRNAYRNTP--LHLAAILGDVNIVMQMLET-GLEVCSARNINNHTPLHLACRSNS 117
Query: 470 VAVMRYLVERSAPVDL 517
+ R + E++ + L
Sbjct: 118 IEAARLIAEKTQSIGL 133
>At1g10340.1 68414.m01164 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 578
Score = 35.5 bits (78), Expect = 0.029
Identities = 21/76 (27%), Positives = 41/76 (53%)
Frame = +2
Query: 290 PRTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGS 469
P ++S N Y + + A G+V+ + +++E G+EV +AR+ + +TP H A S
Sbjct: 61 PSLVSSRNAYRNTP--LHLAAILGDVNIVMQMLET-GLEVCSARNINNHTPLHLACRSNS 117
Query: 470 VAVMRYLVERSAPVDL 517
+ R + E++ + L
Sbjct: 118 IEAARLIAEKTQSIGL 133
>At1g60860.1 68414.m06851 ARF GTPase-activating domain-containing
protein
Length = 776
Score = 34.3 bits (75), Expect = 0.067
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 335 LIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
L+ A +SG+ +E L++ G ++ N RD HG TP H G+ A + L+ R A
Sbjct: 687 LLHVACQSGDPILLELLLQ-FGADI-NMRDYHGRTPLHHCIASGNNAFAKVLLRRGA 741
>At1g34050.1 68414.m04221 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 573
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNAR---DQHGYTPAHWASLDGSVAVMRYLVERSAP 508
I +A+ + +VS + L E + VL R D G T H A+ G ++ ++ + P
Sbjct: 21 IIDAILANDVSTLLALAEG-NLSVLRERYHWDSLGGTVLHLATELGHKEIVEAII-KLCP 78
Query: 509 VDLSCLGTQGPRPIHWACRKGHASI 583
+ G P+H+A R GHA+I
Sbjct: 79 SLVGVTNLDGDTPLHFAARWGHATI 103
>At5g54710.1 68418.m06813 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 598
Score = 33.1 bits (72), Expect = 0.16
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 335 LIFEAVRSGEVSEIERLVE-KLGVEVLNARDQHGYTPAHWASLDGSVAVMR-YLVERSAP 508
L+ +A +SG + L++ + E+ D+ G TP H A ++GSV +++ +L + +
Sbjct: 200 LLHKACKSGNLEMARTLLDVDVNQEIAEKVDKDGLTPLHRAVINGSVEILKEFLCKAPSS 259
Query: 509 VDLSCLGT 532
+++ GT
Sbjct: 260 FNITTQGT 267
>At4g02650.1 68417.m00360 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to Chain A,
Calm-N N-Terminal Domain Of Clathrin Assembly Lymphoid
Myeloid Leukaemia Protein, Pi(4,5)p2 Complex
(GP:13399999) {Homo sapiens}; supporting cDNA
gi|26451912|dbj|AK118440.1|
Length = 611
Score = 32.3 bits (70), Expect = 0.27
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +2
Query: 101 VVADCENSAVAGGVGLAVSSKVYPSPGA-ARGVWALPQPPPCTMAAEESLPQGSPMSPDA 277
V A + S G G A SS + S G+ A + ALP PPP S P +
Sbjct: 488 VNAAVKTSTAYGSSGSA-SSVAFGSAGSPAASMLALPAPPPTANGNRNSPVMVDPFAASL 546
Query: 278 PVAPPRTITSFNQYSDLHQLIFE 346
VAPP + N +L+ E
Sbjct: 547 EVAPPAYV-QMNDMEKKQRLLME 568
>At1g14000.1 68414.m01652 protein kinase family protein / ankyrin
repeat family protein contains Pfam profiles: PF00069
protein kinase domain, PF00023 ankyrin repeat
Length = 438
Score = 31.9 bits (69), Expect = 0.36
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +2
Query: 335 LIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVD 514
LI + + + +L+E+ +++ARD TP H ASL G + V++ L+E A V+
Sbjct: 40 LILWHAHQNDAAAVRKLLEE-DPTLVHARDYDKRTPLHVASLHGWIDVVKCLLEFGADVN 98
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.5 bits (68), Expect = 0.47
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 170 PSPGAARGVWALPQPPPCTMAAEESLPQ--GSPMSPDAPVAPPRTITS 307
PSPG + ++ PP T+ + + P GSP SP +PP T S
Sbjct: 417 PSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSPSIVPSPPSTTPS 464
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Frame = +2
Query: 143 GLAVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQ--GSPMSPDAP-----VAPPRT 298
G SS PSPG + ++ PP T+ + S P GSP SP +P + P T
Sbjct: 505 GSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPT 563
>At3g25860.1 68416.m03222 dihydrolipoamide S-acetyltransferase
(LTA2) identical to dihydrolipoamide S-acetyltransferase
(LTA2) [Arabidopsis thaliana] GI:5881963
Length = 480
Score = 31.5 bits (68), Expect = 0.47
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Frame = +2
Query: 110 DCENSAVAGGVGLAVSSKVYPSPGAA--RGVWALPQPPPCTMAAEESLPQGSPMSPDAPV 283
D E+ A G G +S V + G A + A P PPP + A+ + P+ PD+ +
Sbjct: 202 DIESVAGTGPFGRITASDVETAAGIAPSKSSIAPPPPPPPPVTAKATTTNLPPLLPDSSI 261
Query: 284 APPRTITSFNQYSDLHQLIFEAVRSG---EVSEIERLVEKL 397
P + S + + L R G ++ L EK+
Sbjct: 262 VPFTAMQSAVSKNMIESLSVPTFRVGYPVNTDALDALYEKV 302
>At1g11070.1 68414.m01268 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 554
Score = 31.5 bits (68), Expect = 0.47
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +2
Query: 110 DCENSAVAGGVGLAVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAP 289
DC +V + VS P P G A+P PP TM+AE+ P P P
Sbjct: 177 DCSKVSVKSEM---VSKSFAPPPPPPPGNAAIPVEPPLTMSAEKESYAPLPPPPGRAALP 233
Query: 290 P 292
P
Sbjct: 234 P 234
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = +2
Query: 146 LAVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDA 277
+AV V P G ALP PPP MAA + + P P A
Sbjct: 240 MAVRKGVAAPPLPPPGTAALPPPPPLPMAAGKGVAAPPPPPPGA 283
>At3g03380.1 68416.m00336 DegP protease, putative contains
similarity to degP GI:2623992 from [Bradyrhizobium
japonicum]
Length = 1097
Score = 31.1 bits (67), Expect = 0.63
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 302 TSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSV 472
T Q+ +L L+ + V EIER + L V V + +D H TP H+ + G+V
Sbjct: 331 TVLTQFLNLENLLDDGVGQILELEIERGGQPLSVSV-SVQDLHSITPDHFLEVSGAV 386
>At1g77520.1 68414.m09027 O-methyltransferase family 2 protein
similar to caffeic acid 3-O-methyltransferase GB:O23760
[Clarkia breweri], [SP|Q00763] [Populus tremuloides]
Length = 381
Score = 30.7 bits (66), Expect = 0.83
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 218 PCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKL 397
PC +A SLP P +P+APV R ++ +S L + E +G +IER+
Sbjct: 69 PCEIAC--SLPT-KPTNPEAPVLLDRMLSLLVSHSILKCRMIETGENGRTGKIERVYAAE 125
Query: 398 GVEVLNARDQHG 433
V RD G
Sbjct: 126 PVCKYFLRDSDG 137
>At5g15500.2 68418.m01815 ankyrin repeat family protein contains
Pfam domain, PF00023: Ankyrin repeat
Length = 457
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 NQYSDLHQLIFEAVRSGEVSEI-ERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRY 487
N Y L V G + + ++ E + V+N RD+ G TP H A+ + + M+
Sbjct: 149 NNYDQREGLSVLKVLMGWILRLCQKDAEWIETRVINRRDKDGNTPLHLAAYEINRQAMKL 208
Query: 488 LVERS 502
L+E S
Sbjct: 209 LLESS 213
>At5g15500.1 68418.m01814 ankyrin repeat family protein contains
Pfam domain, PF00023: Ankyrin repeat
Length = 351
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 NQYSDLHQLIFEAVRSGEVSEI-ERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRY 487
N Y L V G + + ++ E + V+N RD+ G TP H A+ + + M+
Sbjct: 43 NNYDQREGLSVLKVLMGWILRLCQKDAEWIETRVINRRDKDGNTPLHLAAYEINRQAMKL 102
Query: 488 LVERS 502
L+E S
Sbjct: 103 LLESS 107
>At4g06526.1 68417.m00938 hypothetical protein
Length = 506
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +2
Query: 110 DCENSAVAGGVGLAVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSP 262
DC + GGVG Y +P A+ G +P T+A E+ L +G P
Sbjct: 307 DCAKCSCCGGVGHMSMYCPYVAPNASEGSSRGVRPLMTTVAEEKCLNEGMP 357
>At2g40200.1 68415.m04943 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 254
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 230 AAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQLIFEAVRSGE-----VSEIERLVEK 394
AAE + Q P D P TI+ F S+ + +IF+A E +SEI R++ K
Sbjct: 115 AAESPIFQDLPTEADEVTVQPETISDFE--SNTNTIIFKASFCCEDQPEAISEIIRVLTK 172
Query: 395 LGVEVLNA 418
L +E + A
Sbjct: 173 LQLETIQA 180
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +2
Query: 146 LAVSSKVYPSPGAARGVWALPQPPPCTMA-AEESLPQGSPMSPDAPVAPPRTITS 307
++ S K YP P P PP M+ + + P P+SP P PP I S
Sbjct: 493 MSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYPPPPPLSPPPPSPPPPYIYS 547
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 170 PSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
PS + V A P PPP P S MSP PP
Sbjct: 489 PSSKMSPSVKAYPPPPPPPEYEPSPPPPSSEMSPSVRAYPP 529
>At1g56530.1 68414.m06501 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 185
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 182 AARGVWALP-QPPPCTMAAEESLPQGSPMSPDAPVAPP 292
AA G + QPPP ESLP SP SP P P
Sbjct: 135 AAAGTTTIAGQPPPPESPPPESLPPPSPESPSPPSPEP 172
>At1g01730.1 68414.m00092 expressed protein
Length = 224
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 155 SSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAPPRTITS 307
+++V P AA PP T A + S SP P APP T+T+
Sbjct: 8 ATRVTEPPPAATSSLPAQAPPLPTSADQRSAELPSPAQPAQMTAPPSTVTT 58
>At4g03480.1 68417.m00475 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 617
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/97 (23%), Positives = 42/97 (43%)
Frame = +2
Query: 293 RTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSV 472
+T T +Q L+ A+++ +++ ++ ++N RD+ G T + G
Sbjct: 303 KTSTLASQLEGRKSLLHAALKAKN-TDVLNVILNDDPSLVNERDEEGRTCLSVGASMGYY 361
Query: 473 AVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
+ L++RS C G PIH A KGH +
Sbjct: 362 KGICKLLDRSTKSVYEC-DKDGSFPIHMAVEKGHLKV 397
>At3g29390.1 68416.m03693 hydroxyproline-rich glycoprotein family
protein sequencing discrepancy between cDNA and genomic
sequence prevents representation of entire coding
sequence
Length = 578
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +2
Query: 110 DCENSAVAGGVGLAVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAP 289
D + S +A + S+ SP + R V +P PPP T+A S P S P
Sbjct: 450 DKQQSELAMTGDVTPSANRVRSPPSPRSV--MPPPPPKTIAPPPSKTMSPPSSKSMLPPP 507
Query: 290 PRTIT 304
PR+ T
Sbjct: 508 PRSKT 512
>At4g14390.1 68417.m02219 ankyrin repeat family protein contains
Pfam profile: PF00023 ankyrin repeat
Length = 694
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 407 VLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
+++ RD +G+T A+ G + L+ERS C G PIH A KGH +I
Sbjct: 317 LMDERDINGWTCLSLAAHIGYYEGVCNLLERSTKGVYVC-DQDGSFPIHTAAEKGHENI 374
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +2
Query: 338 IFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
+F + G +E+L + G+ V + G + H A G + +++ +V P L
Sbjct: 102 VFSKISDGNKECLEKLRSR-GISVARIKSNTGDSILHLAVTWGHLELVKEIV-CECPRLL 159
Query: 518 SCLGTQGPRPIHWACRKGHASI 583
+ G P+H A GH +I
Sbjct: 160 LEQNSSGQTPLHVAAHSGHTTI 181
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Frame = +2
Query: 98 LVVADCENSAVAGGVGLAVSSKVYPSPGA-------ARGVWALPQPPPCTM--AAEESLP 250
L +A +SA+A G A + PSP + P P P AA S P
Sbjct: 10 LFLALIASSAIAQAPGPAPTRSPLPSPAQPPRTAAPTPSITPTPTPTPSATPTAAPVSPP 69
Query: 251 QGSPM-SPDAPVAPPRTIT 304
GSP+ S +P APP ++T
Sbjct: 70 AGSPLPSSASPPAPPTSLT 88
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Frame = +2
Query: 149 AVSSKVYPSPGAARGVWALPQP----PPCTMAAEESLPQGSPMSPDAPVAPPRTITS 307
A S+ P P + A P P PP + A+ S P P P A +PP T++S
Sbjct: 11 APSADSAPPPDTSSDGSAAPPPTDSAPPPSPPADSSPPPALPSLPPAVFSPPPTVSS 67
>At1g58250.1 68414.m06624 SABRE, putative similar to SABRE
(GI:719291) [Arabidopsis thaliana]
Length = 2603
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 285 HHPGLSRVSINTPICTN*YLRRFDQEKYRKS---NAWLKNLEWKS*MLGTSMAILPHTGH 455
H + V N + + + FD++ + KS +A L++ E ++ S A PH H
Sbjct: 236 HDRAVGIVVRNVEVTSGDVILNFDEDSFPKSKQSSASLRSDEVRTSATAASSAKKPHKEH 295
Query: 456 RLMGAWRSCDTSWKDQLLSIFPVLALR 536
+L+ A +S+ +++ P L +R
Sbjct: 296 QLVAALAKYSSSFPEKVSFSLPKLDVR 322
>At1g52550.1 68414.m05932 expressed protein
Length = 131
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 173 SPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQLIFEAV 352
SP ++ ++ +P P P A L +P SPD P PP+ T + +I + V
Sbjct: 37 SPLPSQTLFLVPTPKPVRRIAVAPLGPPTPPSPDPP--PPKNTTELTSLVGVASMIQDRV 94
Query: 353 R 355
+
Sbjct: 95 K 95
>At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing
protein
Length = 775
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 335 LIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSA 505
L+ A G+ +E L++ G + LN RD HG TP H G+ + L+ R A
Sbjct: 686 LLHVACHIGDSVLLELLLQ-FGAD-LNIRDYHGRTPLHHCISSGNHKFAKILLRRGA 740
>At5g57740.1 68418.m07218 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 508
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 404 EVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPV 511
EV+N G TP H A+L+G + ++ L++ A V
Sbjct: 169 EVINRAADGGITPLHVAALNGHIETVQLLLDLGASV 204
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +2
Query: 206 PQPPPCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYS-DLHQLIFEAVRSGEVSEIER 382
P PPP + S P++P P F + S +H A +G VSE+ R
Sbjct: 33 PPPPPLKPPSSGSATTKPPINPSKPGFTRSFGVYFPRASAQVHATAAAASHNGVVSELRR 92
Query: 383 LVEKL 397
VE+L
Sbjct: 93 QVEEL 97
>At1g04660.1 68414.m00463 glycine-rich protein
Length = 212
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 294 LGGATGASGDMGEPCGRDSSAAIVHGGGCGSAH 196
LGG GA G +G G + I GGG G H
Sbjct: 169 LGGLGGAGGGLGGVGGLGKAGGIGVGGGIGGGH 201
>At5g60210.1 68418.m07547 cytoplasmic linker protein-related
contains weak similarity to cytoplasmic linker protein
CLIP-170 (GI:2905649) [Gallus gallus]
Length = 588
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = +2
Query: 218 PCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKL 397
P +AA E SP+S ++ N+ S + E R ++E+E LV +L
Sbjct: 48 PLKIAALEPESSSSPISATNRTPKDKSPNVLNRRSP-RSPVSEKKRPSRITELELLVSQL 106
Query: 398 GVEVLNARDQ 427
E+ A+DQ
Sbjct: 107 QEELKKAKDQ 116
>At5g11730.1 68418.m01370 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 386
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = -1
Query: 256 ALWERFLCGHRARGRLWQRPH---AARRPRTWIYLATHGEADAPRYSRVLAVRHDQRLFT 86
+LWERFL GH+ ++ PH A+ P + ++ + + R+ ++RL
Sbjct: 133 SLWERFLKGHKGLYSVYLHPHPSFTAKFPASSVFHRRQIPSQVAEWGRMSMCDAEKRLLA 192
Query: 85 ENL 77
L
Sbjct: 193 NAL 195
>At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 985
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -1
Query: 214 RLWQRPHAARRPRTWIY-LATHGEADAPRYSRVLAVRHDQRLFTENLYTAIQASLNFDFF 38
RL P + TWI L RY +L RHD+R T + Q S+ +
Sbjct: 687 RLHSSPFLLNKRNTWIKRLKKFQLVVGSRY--ILRTRHDKRRLTISHLNVSQVSIGWLLA 744
Query: 37 YTTQSSLD 14
YTT +L+
Sbjct: 745 YTTSLALN 752
>At3g52250.1 68416.m05742 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 1677
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 303 VIVLGGATGASGDMGEPCGRDSSAAIVHGGGC 208
V V G G D+ +PC +S++ IV+ G C
Sbjct: 1172 VSVDNGNEGGGSDLEDPCPMESNSGIVNNGVC 1203
>At3g18670.1 68416.m02371 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 598
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = +2
Query: 314 QYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLV 493
Q + + ++F+ + SGE+ + +++ + +G TP H A L G + ++ ++
Sbjct: 45 QENSTYLVLFKNIDSGELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEII 104
Query: 494 ER 499
R
Sbjct: 105 RR 106
>At3g16940.1 68416.m02165 calmodulin-binding protein similar to
anther ethylene-upregulated protein ER1 GI:11612392 from
[Nicotiana tabacum]; contains Pfam profile: PF00612 IQ
calmodulin-binding motif (3 copies)
Length = 852
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 410 LNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDL 517
LN RD+ G+T HWA+ G ++ L+ A +L
Sbjct: 536 LNFRDKQGWTALHWAAYYGREKMVAALLSAGARPNL 571
>At3g02850.1 68416.m00277 stelar K+ outward rectifier (SKOR) /
potassium channel protein identical to SKOR [Arabidopsis
thaliana] gi|3810676|emb|CAA11280; member of the 1 pore,
6 transmembrane (1P/6TM) Shaker K+ channel family,
PMID:11500563
Length = 828
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/87 (25%), Positives = 41/87 (47%)
Frame = +2
Query: 314 QYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLV 493
Q ++L + A G++ +++ L+ G N D G +P H A+ G + YL+
Sbjct: 544 QEAELALKLNSAAFYGDLYQLKSLIRAGGDP--NKTDYDGRSPLHLAASRGYEDITLYLI 601
Query: 494 ERSAPVDLSCLGTQGPRPIHWACRKGH 574
+ S VD++ G P+ A + G+
Sbjct: 602 QES--VDVNIKDKLGSTPLLEAIKNGN 626
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/41 (43%), Positives = 18/41 (43%)
Frame = +2
Query: 170 PSPGAARGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
P PG A P PPP T AA P PM AP PP
Sbjct: 541 PPPGTAAAP-PPPPPPPGTQAAPPP-PPPPPMQNRAPSPPP 579
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 200 ALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
A P PPP + + P P P A VAPP
Sbjct: 507 APPPPPPPPLPTTIAAPPPPPPPPRAAVAPP 537
>At1g11740.1 68414.m01347 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 624
Score = 28.7 bits (61), Expect = 3.3
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +2
Query: 293 RTITSFNQYSDLHQLIFEAVRSGEVSEIERLVEKLGVEVLNARD-QHGYTPAHWASLDGS 469
R ++S + +D Q+ E S +S+ ER+ EK+ V++ RD G TP H A G
Sbjct: 36 RLVSSLPKLTDPEQIHTE---SDSMSQ-ERVAEKIST-VIDRRDVPFGETPLHLAVRLGD 90
Query: 470 VAVMRYLVERSAPVDLSCLGTQGPRPIHWA-CRK 568
V + + SA D++ G +H A CR+
Sbjct: 91 VFAAKTI--SSAGADITLQNAAGWNSLHEALCRR 122
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Frame = +2
Query: 101 VVADCENSAVAGGVGLAVSSKVYPSPGAARGVWALP----QPPPCTMAAEESLPQGSPMS 268
+VA S +A + ++ V P P A A P PPP A S P S S
Sbjct: 11 IVALFTTSCLAQAPAPSPTTTVTPPPVATPPPAATPAPTTTPPPAVSPAPTSSPPSSAPS 70
Query: 269 P--DAPVAPP 292
P DAP A P
Sbjct: 71 PSSDAPTASP 80
>At5g50140.1 68418.m06210 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 535
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 422 DQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRKGHASI 583
+ G T H A G+ +++ +VE P +S T+ P+H A R GH SI
Sbjct: 24 ESFGGTFLHLAVKLGNEELVKKIVEIH-PSLVSSTNTKSDTPLHLAARLGHTSI 76
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +2
Query: 188 RGVWALPQPPPCTMAAEESLPQGSPMSPDAPVAPP 292
RG LP PPP M S P PMS P PP
Sbjct: 18 RGRVPLPPPPPPPM--RRSAPSPPPMSGRVPPPPP 50
>At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to polyphosphoinositide binding
protein Ssh2, Glycine max, gb:T05953; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 668
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = +2
Query: 197 WALPQ-PPPCTMAAEESLPQGSPMSPDAPVAPPRTITS 307
W P+ P + A S+P+ P P PP T TS
Sbjct: 221 WTEPELPDEAVLEAAASVPEPKQPEPQTPPPPPSTTTS 258
>At2g20260.1 68415.m02367 photosystem I reaction center subunit IV,
chloroplast, putative / PSI-E, putative (PSAE2)
identical to SP|Q9S714; similar to SP|P12354 Photosystem
I reaction center subunit IV, chloroplast precursor
(PSI-E) {Spinacia oleracea}; contains Pfam profile
PF02427: Photosystem I reaction centre subunit IV / PsaE
Length = 145
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 150 ARPTPPATAEFSQSATTSASLP 85
A TPPATA S+TT+A+ P
Sbjct: 48 AEDTPPATASSDSSSTTAAAAP 69
>At2g13790.1 68415.m01522 leucine-rich repeat family protein /
protein kinase family protein
Length = 620
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 98 LVVADCENSAVAGGVGLAVSSKVY-PSPGAARGVWALPQPPPCTMAAEESLPQGSPMS 268
L V D N+ ++G + + S ++ P A + LP+PPP + + P G M+
Sbjct: 172 LQVLDISNNRLSGDIPVNGSFSLFTPISFANNSLTDLPEPPPTSTSPTPPPPSGGQMT 229
>At1g77530.1 68414.m09028 O-methyltransferase family 2 protein
similar to caffeic acid 3-O-methyltransferase GB:O23760
[Clarkia breweri], [SP|Q00763] [Populus tremuloides]
Length = 381
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 242 SLPQGSPMSPDAPVAPPRTITSFNQYSDLHQLIFEAVRSGEVSEIERL 385
SLP P +P+APV R + +S L + E+ +G+ +IER+
Sbjct: 75 SLPN-KPTNPEAPVLLDRMLRLLVSHSILKCCMVESRENGQTGKIERV 121
>At1g32800.1 68414.m04043 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 398
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -2
Query: 378 SISDTSPDRTASNISWCKSEY*LKLVIVLGGATGASGDMGEPCGRDSSAAIVHGGGCG 205
S D + S++ KS K + GG + ++G C R+ + + VH G G
Sbjct: 290 SRKDIEAEGFTSDVGITKSVKAKKAALETGGDESGNTEIGVECSREQNLSDVHANGTG 347
>At1g05640.1 68414.m00585 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 627
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Frame = +2
Query: 347 AVRSGEVSEIERLVEKL-GVEVL----NARDQHGYTPAHWASLDGSVAVMRYLVERSAPV 511
A R+G + ++ L+ G+E L + ++ G TP + A+ +G V+ +++
Sbjct: 120 AARTGNLGKVMELIRACNGIEELKELSSKQNLEGETPLYSAAENGHSLVVEEMLKHMDLD 179
Query: 512 DLSCLGTQGPRPIHWACRKGH 574
S G P H A ++GH
Sbjct: 180 TASVKARNGFDPFHVAAKQGH 200
>At5g64310.1 68418.m08078 arabinogalactan-protein (AGP1) identical
to gi:3883120 gb:AAC77823
Length = 131
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +2
Query: 140 VGLAVSSKVYPSPGAARGVWALPQPPPCTMAAEESLPQGSPM-SPDAPVAP 289
+ AV+ P+P G P P P M A P+ SP SP A + P
Sbjct: 17 ISSAVAQSPAPAPSNVGGRRISPAPSPKKMTAPAPAPEVSPSPSPAAALTP 67
>At5g61980.1 68418.m07779 ARF GTPase-activating domain-containing
protein similar to GCN4-complementing protein (GCP1)
GI:6465806 from [Arabidopsis thaliana]
Length = 850
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 335 LIFEAVRSGEVSEIERLVEKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVER 499
L+ A S ++ +E L++ G ++ NA D G TP H + A+ R L+ R
Sbjct: 761 LLHLACLSADIGMVELLLQ-YGAKI-NATDSKGRTPLHHCIISRRYAIARLLLMR 813
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 206 PQPPPCTMAAEESLPQGSPMSPDAPVAPPRTIT 304
P PPP + + SP AP APPR T
Sbjct: 733 PPPPPAPPTPQSNGISAMKSSPPAPPAPPRLPT 765
>At5g11990.1 68418.m01402 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 181
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 212 PPPCTMAAEESLPQGSPMSPDAPVAPPRTITS 307
PPP ES P P+SPD +PP +S
Sbjct: 95 PPPPRFYYFESTPPPPPLSPDGKGSPPSVPSS 126
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 206 PQPPPCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQL 337
P PPP T+ + P PP T T SD HQL
Sbjct: 157 PPPPPPTITPPVTTTTTGHHHHRPPPPPPATTTPITNTSDHHQL 200
>At3g04500.1 68416.m00477 RNA recognition motif (RRM)-containing
protein similar to ssRNA-binding protein [Dictyostelium
discoideum] GI:1546894; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 245
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 212 PPPCTMAAEESLPQGSPMSPDAPVAPPRTITSFNQYSDLHQL 337
P P A S+P G+ + P PV P + ++ QY HQL
Sbjct: 40 PSPAVPAPVASIP-GATVYPQ-PVGPVPAVYAYPQYQQAHQL 79
>At1g35625.1 68414.m04426 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 279
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 470 RSHQAMPSVREYSHAGPEHSRLPLQVFQ 387
R H+ VR+ H G HSR+P + Q
Sbjct: 147 RRHRIRQHVRDLHHGGQGHSRMPKDLLQ 174
>At5g65950.1 68418.m08302 expressed protein
Length = 865
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 243 DSSAAIVHGGGCG-SAHTPRAAPGLGYTLLLTARPT 139
++S I GGGCG S + APG + + T PT
Sbjct: 671 ETSCLIQQGGGCGDSPSSANLAPGEEFKKVFTVIPT 706
>At5g54610.1 68418.m06800 ankyrin repeat family protein contains
Pfam domain, PF00023: Ankyrin repeat
Length = 426
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 401 VEVLNARDQHGYTPAHWASLDGSVAVMRYLVE 496
++VLN RD+ G T H A+ + + V++ LV+
Sbjct: 173 IDVLNRRDRGGNTVLHLAAYENNDKVVKQLVK 204
>At4g35750.1 68417.m05074 Rho-GTPase-activating protein-related
contains weak similarity to Rho-GTPase-activating
protein 1 (GTPase-activating protein rhoOGAP)
(Rho-related small GTPase protein activator) (CDC42
GTPase-activating protein) (p50-rhoGAP)
(Swiss-Prot:Q07960) [Homo sapiens]
Length = 202
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 11/62 (17%)
Frame = +2
Query: 356 SGEVSEIER--LVEKLGVEVLNARDQHG---------YTPAHWASLDGSVAVMRYLVERS 502
S ++SEIE+ L+EKL + ++ RD+ G + PA + SLD + +YL E+
Sbjct: 2 SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLD---VLKKYLEEKI 58
Query: 503 AP 508
P
Sbjct: 59 FP 60
>At1g03670.1 68414.m00346 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 616
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +2
Query: 389 EKLGVEVLNARDQHGYTPAHWASLDGSVAVMRYLVERSAPVDLSCLGTQGPRPIHWACRK 568
+K + D G+TP H A+ +G V +++ + + P L Q H A
Sbjct: 273 DKAASSLCYVADDDGFTPIHMAAKEGHVRIIKEFL-KHCPDSRELLNNQCQNIFHVAAIA 331
Query: 569 GHASI 583
G + +
Sbjct: 332 GKSKV 336
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,035,258
Number of Sequences: 28952
Number of extensions: 346668
Number of successful extensions: 1691
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1641
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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