BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10a08r (722 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc... 25 1.8 AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 25 3.1 >EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium channel alpha2-delta subunit 1 protein. Length = 1256 Score = 25.4 bits (53), Expect = 1.8 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +3 Query: 471 STYDNTREIKSAVG*LEKRNTF-FFVSFENQYYLL 572 +T DN +E+K+A+ +E NT F + E + LL Sbjct: 328 ATPDNVKEVKTAINAVECENTANFSAALETAFELL 362 >AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. Length = 565 Score = 24.6 bits (51), Expect = 3.1 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 4/39 (10%) Frame = -3 Query: 189 PRRICFYTYMHTKCN----LKYNTLFLKYFIKIVYFFNV 85 P R +Y Y+ T+CN Y T+ + ++ FNV Sbjct: 17 PARTVYYYYLFTQCNPLSTYLYRTILALRLVTLLPCFNV 55 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 690,434 Number of Sequences: 2352 Number of extensions: 13292 Number of successful extensions: 56 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 56 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 73597131 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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