Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a08r
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003758-1|AAO41437.1| 1254|Drosophila melanogaster RE51958p pro...    29   4.8  
AY094721-1|AAM11074.1| 1028|Drosophila melanogaster GH20168p pro...    29   4.8  
AE014297-2061|AAF55209.1| 1254|Drosophila melanogaster CG6045-PA...    29   4.8  
AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-P...    29   8.5  

>BT003758-1|AAO41437.1| 1254|Drosophila melanogaster RE51958p
           protein.
          Length = 1254

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 422 TASADKHYSSINVKKQSSNFGSVECSLSLRTPGLIKFY 309
           T S   H + +   K  S   S++ S +L+ PG+I FY
Sbjct: 551 TTSNTLHCAFVGATKVGSTIDSIDASEALKQPGVIAFY 588


>AY094721-1|AAM11074.1| 1028|Drosophila melanogaster GH20168p
           protein.
          Length = 1028

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 422 TASADKHYSSINVKKQSSNFGSVECSLSLRTPGLIKFY 309
           T S   H + +   K  S   S++ S +L+ PG+I FY
Sbjct: 325 TTSNTLHCAFVGATKVGSTIDSIDASEALKQPGVIAFY 362


>AE014297-2061|AAF55209.1| 1254|Drosophila melanogaster CG6045-PA
           protein.
          Length = 1254

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 422 TASADKHYSSINVKKQSSNFGSVECSLSLRTPGLIKFY 309
           T S   H + +   K  S   S++ S +L+ PG+I FY
Sbjct: 551 TTSNTLHCAFVGATKVGSTIDSIDASEALKQPGVIAFY 588


>AE014297-3099|AAN13902.1|  595|Drosophila melanogaster CG31164-PA
           protein.
          Length = 595

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 489 REIKSAVG*LEKRNTFFFVSFENQYYLLLVICIYVF*SLICFVQEILLCVYTKVT 653
           + IK+ +   E++ +   +SF++  +L  V+CI    S + FV EIL   Y + T
Sbjct: 535 KHIKTTLRESEQQPSHLPLSFDHFKWLWAVLCIAYVMSFMVFVMEILWSKYQRRT 589


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,692,654
Number of Sequences: 53049
Number of extensions: 541880
Number of successful extensions: 784
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)