Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a08f
(627 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16X87 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_Q5TV96 Cluster: ENSANGP00000026764; n=1; Anopheles gamb... 41 0.028
UniRef50_UPI0000E45EBA Cluster: PREDICTED: hypothetical protein;... 35 1.8
UniRef50_O43303 Cluster: Centrosomal protein of 110 kDa; n=27; A... 35 1.8
UniRef50_Q6FES5 Cluster: Putative TonB; n=2; Acinetobacter|Rep: ... 34 2.4
UniRef50_UPI000069DE2C Cluster: Centrosomal protein of 110 kDa (... 33 5.6
UniRef50_A2F4T4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q6CTJ0 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 5.6
UniRef50_UPI0000499410 Cluster: hypothetical protein 28.t00007; ... 32 9.8
UniRef50_Q45EX2 Cluster: RE33938p; n=4; Drosophila melanogaster|... 32 9.8
UniRef50_Q4FLD7 Cluster: DNA-directed RNA polymerase subunit ome... 32 9.8
>UniRef50_Q16X87 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 710
Score = 46.0 bits (104), Expect = 7e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 324 SGQYVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKRISLLQ 461
S + S KINGVP+LPPV++ E R E+ Y+ +A E+E+++ L+
Sbjct: 2 SSGFSSVFKINGVPILPPVMTDEVRAEVARYRRMAVELEQKLQNLR 47
>UniRef50_Q5TV96 Cluster: ENSANGP00000026764; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000026764 - Anopheles gambiae
str. PEST
Length = 608
Score = 40.7 bits (91), Expect = 0.028
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +3
Query: 333 YVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKRI 449
+VS K++GVP+LPP+++ E R + Y+ A E+E R+
Sbjct: 5 FVSVFKLDGVPILPPLVNDEVRAAVAIYRQKAMEIENRL 43
>UniRef50_UPI0000E45EBA Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 772
Score = 34.7 bits (76), Expect = 1.8
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +3
Query: 333 YVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEK 443
Y S +++N P+LPP+++ + R EM YK +A + E+
Sbjct: 39 YTSMVRVNDKPILPPLMTPDKRAEMIRYKAVAIQRER 75
>UniRef50_O43303 Cluster: Centrosomal protein of 110 kDa; n=27;
Amniota|Rep: Centrosomal protein of 110 kDa - Homo
sapiens (Human)
Length = 1012
Score = 34.7 bits (76), Expect = 1.8
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 336 VSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKR 446
+S ++ +GV +L P+L+ E RKEMQ K A +VE R
Sbjct: 33 ISLIRFHGVAILSPLLNIEKRKEMQQEKQKALDVEAR 69
>UniRef50_Q6FES5 Cluster: Putative TonB; n=2; Acinetobacter|Rep:
Putative TonB - Acinetobacter sp. (strain ADP1)
Length = 260
Score = 34.3 bits (75), Expect = 2.4
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Frame = +3
Query: 288 MNDPWDVKSVRQSGQYVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKRISLLQPY 467
M P ++K + + V +KI P LPP +E +KE K KEV K + + P
Sbjct: 45 MKSP-ELKPIEKKPLNVRFVKIQAPPPLPPKPKEEPKKEQPKPKKEVKEV-KVVEKVAPP 102
Query: 468 IAXXXXXXXXDRTDAPEIPESEEIQTECK---ITSVLSDEVYEKALKESPKAQPNV 626
+ + P+ E Q + K + ++++V EK K P AQP V
Sbjct: 103 PKKVEKVQQVKKAETPKQVVKVEPQVDVKPLTTNTTITEKVAEKP-KPQPAAQPQV 157
>UniRef50_UPI000069DE2C Cluster: Centrosomal protein of 110 kDa
(Cep110 protein).; n=1; Xenopus tropicalis|Rep:
Centrosomal protein of 110 kDa (Cep110 protein). -
Xenopus tropicalis
Length = 975
Score = 33.1 bits (72), Expect = 5.6
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +3
Query: 330 QYVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKR 446
Q VS +K +GV +L P+L+ E +EMQ Y+ A E+ ++
Sbjct: 30 QRVSVIKFHGVAVLSPLLTAEKMQEMQQYRHRAIELNEK 68
>UniRef50_A2F4T4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 952
Score = 33.1 bits (72), Expect = 5.6
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 264 SRVHLIVAMNDPWDVKSVRQSGQYVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEK 443
S +H++V N +++ V Q + +KI +PL+ VLS L+ KE++
Sbjct: 544 SNIHVVVLANRDANIREVFGRSQQIGFLKIGNIPLIEHVLSHLNNLGFNRITLVCKEID- 602
Query: 444 RISLLQPYI 470
S Q Y+
Sbjct: 603 -YSAYQTYL 610
>UniRef50_Q6CTJ0 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 872
Score = 33.1 bits (72), Expect = 5.6
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = +3
Query: 267 RVHLIVAMNDPWDVKSVRQSGQYVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKR 446
++HLI NDP +++VR + K+ P + +KE ++++Y L+A+E++ R
Sbjct: 279 QIHLIKENNDPVVIQNVRNQTPF-HITKLQ-TPFITRQFNKELIEKLRYVPLIAEELQFR 336
Query: 447 ISLLQPYIA 473
+ Y+A
Sbjct: 337 EEQEKAYVA 345
>UniRef50_UPI0000499410 Cluster: hypothetical protein 28.t00007;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 28.t00007 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 32.3 bits (70), Expect = 9.8
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 364 LFYRLSYQKNVAKRCSTTNFWPKKSKSEYHC 456
++Y Y KN+ S N++P++ + E+HC
Sbjct: 167 IYYLGDYAKNIILPTSVCNYYPERGEGEFHC 197
>UniRef50_Q45EX2 Cluster: RE33938p; n=4; Drosophila
melanogaster|Rep: RE33938p - Drosophila melanogaster
(Fruit fly)
Length = 666
Score = 32.3 bits (70), Expect = 9.8
Identities = 12/35 (34%), Positives = 25/35 (71%)
Frame = +3
Query: 351 INGVPLLPPVLSKECRKEMQYYKLLAKEVEKRISL 455
++G P+LPP+++ ++E+Q + +A+ +EKR L
Sbjct: 56 LDGQPILPPLMTSAKKREVQLARQMAEALEKRYRL 90
>UniRef50_Q4FLD7 Cluster: DNA-directed RNA polymerase subunit omega;
n=2; Candidatus Pelagibacter ubique|Rep: DNA-directed
RNA polymerase subunit omega - Pelagibacter ubique
Length = 180
Score = 32.3 bits (70), Expect = 9.8
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 354 NGVPLLPPVLSKECRKEMQYYKLLAKEVEKRISLLQPYIAXXXXXXXXDRTDAPEIPESE 533
+G P+LP SK RK + ++ + ++E+ + +P + D A + +
Sbjct: 103 SGTPILP---SKRARKIPEKIQVSSDDLEELTAKAEPEVDVDAELEVGDEETAVSLDQIA 159
Query: 534 EIQTECKITSVLSDE 578
E +TE + T V SD+
Sbjct: 160 EAETEAETTEVNSDD 174
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,256,426
Number of Sequences: 1657284
Number of extensions: 11349031
Number of successful extensions: 24608
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24599
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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