Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a08f
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    25   0.39 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.4  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 14/60 (23%), Positives = 22/60 (36%)
 Frame = -2

Query: 368 KRHTINLHAGYILSGLSHRFHIPRVVHSDD*MNATGSPSLVTEEKTYFPRSPSPLTNNIV 189
           K +   +H GY+  G     + P V H         SP L      Y     +P  N+++
Sbjct: 6   KNYDDGIHPGYMDGGAGAGLYEPHVAHRPGLQGLHHSPHLNHAMHPYHANHVNPTANHVM 65


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 435 LLWPKVCSTASLCDILL 385
           +LW  + ST  LCD +L
Sbjct: 160 ILWVGILSTIFLCDTIL 176


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1
          protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 44 LLICFKRNLS 15
          ++ICF+RNLS
Sbjct: 9  IIICFERNLS 18


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 330 QYVSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKRISLLQPY 467
           Q++S MK+N  P +    S    + +  +  L +E+E  I  +  +
Sbjct: 221 QWISVMKVNKQPKVIQGKSALSYERLNEFMRLVEEIEDVIEAINGF 266


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -1

Query: 378  QAVEEAHH*SSCRIHTVRTVAPISHPTGRS 289
            +AVEE    +   +H+   V P  H T +S
Sbjct: 1786 EAVEEEREEAPPSVHSSTVVPPPQHSTTQS 1815


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 309 KSVRQSGQYVSCMKINGVPLLPPVLSKECR 398
           +S+R++ QYV   K  G  ++      +CR
Sbjct: 64  RSIRRNRQYVCKAKDEGSCIIDKTHRNQCR 93


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 309 KSVRQSGQYVSCMKINGVPLLPPVLSKECR 398
           +S+R++ QYV   K  G  ++      +CR
Sbjct: 64  RSIRRNRQYVCKAKDEGSCIIDKTHRNQCR 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,911
Number of Sequences: 336
Number of extensions: 3120
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)