Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a08f
         (627 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036654-1|AAH36654.1|  991|Homo sapiens CP110 protein protein.        35   0.27 
AC003108-2|AAC05804.1|  991|Homo sapiens KIAA0420 protein.             35   0.27 
AB007879-1|BAA24849.2| 1000|Homo sapiens KIAA0419 protein.             35   0.27 

>BC036654-1|AAH36654.1|  991|Homo sapiens CP110 protein protein.
          Length = 991

 Score = 34.7 bits (76), Expect = 0.27
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +3

Query: 336 VSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKR 446
           +S ++ +GV +L P+L+ E RKEMQ  K  A +VE R
Sbjct: 33  ISLIRFHGVAILSPLLNIEKRKEMQQEKQKALDVEAR 69


>AC003108-2|AAC05804.1|  991|Homo sapiens KIAA0420 protein.
          Length = 991

 Score = 34.7 bits (76), Expect = 0.27
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +3

Query: 336 VSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKR 446
           +S ++ +GV +L P+L+ E RKEMQ  K  A +VE R
Sbjct: 33  ISLIRFHGVAILSPLLNIEKRKEMQQEKQKALDVEAR 69


>AB007879-1|BAA24849.2| 1000|Homo sapiens KIAA0419 protein.
          Length = 1000

 Score = 34.7 bits (76), Expect = 0.27
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +3

Query: 336 VSCMKINGVPLLPPVLSKECRKEMQYYKLLAKEVEKR 446
           +S ++ +GV +L P+L+ E RKEMQ  K  A +VE R
Sbjct: 42  ISLIRFHGVAILSPLLNIEKRKEMQQEKQKALDVEAR 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,453,490
Number of Sequences: 237096
Number of extensions: 1683031
Number of successful extensions: 2896
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2896
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)