Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a05r
(803 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 352 2e-97
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 352 2e-97
SB_56| Best HMM Match : Actin (HMM E-Value=0) 352 2e-97
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 352 2e-97
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 350 9e-97
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 347 5e-96
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 259 2e-69
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 125 5e-29
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 85 5e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 69 4e-12
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 59 4e-09
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 50 2e-06
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.007
SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 30 2.5
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 29 3.3
SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19) 29 4.4
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 29 4.4
SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 5.8
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0) 28 7.7
SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 352 bits (866), Expect = 2e-97
Identities = 166/173 (95%), Positives = 170/173 (98%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 166 TAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMF 225
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI+ALAP
Sbjct: 226 QPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAP 285
Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 286 PTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 352 bits (866), Expect = 2e-97
Identities = 166/173 (95%), Positives = 170/173 (98%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMF 263
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP
Sbjct: 264 QPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAP 323
Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 PTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 352 bits (866), Expect = 2e-97
Identities = 166/173 (95%), Positives = 170/173 (98%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 203 TAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMF 262
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEIT+LAP
Sbjct: 263 QPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAP 322
Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 352 bits (866), Expect = 2e-97
Identities = 166/173 (95%), Positives = 170/173 (98%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TAEREIVRDIKEKLCYVALDFEQEM TAASSSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 204 TAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMF 263
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TMYPGIADRMQKEI+ALAP
Sbjct: 264 QPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAP 323
Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 324 PTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 350 bits (860), Expect = 9e-97
Identities = 164/173 (94%), Positives = 170/173 (98%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELPDGQVITIGNERFRCPEAL
Sbjct: 177 TAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALL 236
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTV+SGGTTMYPG+ADRMQKEI+ALAP
Sbjct: 237 QPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAP 296
Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVHRKCF
Sbjct: 297 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 347 bits (854), Expect = 5e-96
Identities = 164/173 (94%), Positives = 170/173 (98%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TAEREIVRDIKEKL YVALDFEQEMATAA+SSSLEKSYELPDGQVITIGNERFRCPEA+F
Sbjct: 203 TAEREIVRDIKEKLAYVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMF 262
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 443
QPSFLGME+ GIHETTYNSIMKCDVDIRKDLYANTVLSGG+TM+PGIADRMQKEI+ALAP
Sbjct: 263 QPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAP 322
Query: 442 STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 284
TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 259 bits (635), Expect = 2e-69
Identities = 118/145 (81%), Positives = 132/145 (91%)
Frame = -2
Query: 718 ASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIR 539
A+S LEK+YELPDGQVI+IGNERFRCPEA+FQP+FLGMEA GIHE YN IMKCDVDIR
Sbjct: 5 ANSPILEKTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIR 64
Query: 538 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLS 359
KDLY+N VLSGG+TM+PGIADRMQKEI LA ++MK+K+IAPPERKYSVWIGGSILASLS
Sbjct: 65 KDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMKVKVIAPPERKYSVWIGGSILASLS 124
Query: 358 TFQQMWISKQEYDESGPSIVHRKCF 284
TFQQMWI+K+EY E GP IVHRKCF
Sbjct: 125 TFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 129 bits (312), Expect = 2e-30
Identities = 75/193 (38%), Positives = 108/193 (55%), Gaps = 29/193 (15%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TA+ E VR +KEKLCYV + EQE A ++ L + Y LPDG+V+ + ERF PEALF
Sbjct: 207 TADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALF 266
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-- 449
QP + +E G+ E +N+I D+D R + Y + VLSGG+TMYPG+ R+++EI L
Sbjct: 267 QPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREIKQLYL 326
Query: 448 -------------------APST-----MKIKI-IAPP-ERKYSVWIGGSILAS-LSTFQ 350
P T K KI I P RK+ V++GG++LA +
Sbjct: 327 ERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMKDKD 386
Query: 349 QMWISKQEYDESG 311
W++++EY+E G
Sbjct: 387 SFWMTRKEYEEKG 399
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 125 bits (301), Expect = 5e-29
Identities = 56/99 (56%), Positives = 73/99 (73%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 623
TAE++I+RD+KE LCY A+D+E+E+ A +S E Y LPDGQ I IG+ERFR E LF
Sbjct: 2248 TAEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLF 2307
Query: 622 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 506
QPS LG + GIHE+ + SI KCD+D+R +L+ N VLSG
Sbjct: 2308 QPSLLGRDIDGIHESIFKSIKKCDIDLRAELFHNIVLSG 2346
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 85.4 bits (202), Expect = 5e-17
Identities = 50/149 (33%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Frame = -2
Query: 667 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 491
+ + ERF PE F P F + + E N I C +D+R+ LY N VLSGG+TM+
Sbjct: 196 VDVAYERFLGPEIFFHPEFSNPDFTTPLSEVVDNVIQNCPIDVRRPLYKNIVLSGGSTMF 255
Query: 490 PGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLS 359
R+Q++I + P ++ ++I+ ++Y+VW GGS+LAS
Sbjct: 256 RDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQRYAVWFGGSMLASTP 315
Query: 358 TFQQMWISKQEYDESGPSIVHRKCF*THR 272
F + +K +YDE GPSI F HR
Sbjct: 316 EFYSVCHTKADYDEHGPSICRHNPF-LHR 343
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -2
Query: 607 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 428
G A G+ + S+ D+DIR L+ + +++GG T+ G +R+ +E+ + P +M++
Sbjct: 146 GSTAMGVTQVVTTSVGMTDIDIRAGLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRL 205
Query: 427 KII---APPERKYSVWIGGSILASL 362
K+I + E++++ WIGGSILASL
Sbjct: 206 KLISNNSSVEKRFNPWIGGSILASL 230
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 59.3 bits (137), Expect = 4e-09
Identities = 28/61 (45%), Positives = 39/61 (63%)
Frame = -2
Query: 790 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 611
+IV DIKEK+CY++ D +E+ ++ L K Y LPDGQ+I+IG E E LF+P
Sbjct: 838 QIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMISIGYECISSMEPLFRPDL 897
Query: 610 L 608
L
Sbjct: 898 L 898
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 52.4 bits (120), Expect = 4e-07
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = -2
Query: 571 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIA 416
+S++ C +D RK L N VL GGT M PG R+ +EI L S +K+
Sbjct: 64 DSLLLCPIDTRKTLAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQ 123
Query: 415 PP-ERKYSVWIGGSILASLSTFQQMWISKQEYDE 317
PP + W+GG+I SL +++ Y +
Sbjct: 124 PPVNANITAWLGGAIFGSLEVLADRSTTRERYQQ 157
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2
Query: 802 TAEREIVRDIKEKLCYVALDFEQEM 728
TAEREIVRDIKEKLCYVALDF QE+
Sbjct: 82 TAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = -2
Query: 568 SIMKCDVDIRKDLYANTVLSGGTTMYPG 485
+I K D+D+R+ LY+N VLSGG+T++ G
Sbjct: 264 AIQKSDLDLRRVLYSNIVLSGGSTLFKG 291
>SB_30721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -2
Query: 637 PEALFQPSFLGMEACGIHET 578
PE +FQPS LG+E GI ET
Sbjct: 3 PEIIFQPSMLGLEQAGITET 22
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 375 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD-NTVLAYKSLRMS 548
+DPP+ +Y L+GG ++ + FCI G++V PP+ N+ + R++
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPECNSAIVLPDARIT 814
Query: 549 TS 554
S
Sbjct: 815 AS 816
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 765 SCATSLLTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSV 640
SCA S+ + L PA+P+ S++ F T++ T+ S+
Sbjct: 970 SCAEPRSIDSKHYTALSPASPASSISCFSTLQLKQMPTRSSI 1011
>SB_22949| Best HMM Match : rve (HMM E-Value=1.2e-19)
Length = 158
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -3
Query: 669 SSPSETKDSVAQRLSSNPRSWVWK 598
S+ SETK SV +R + + W+W+
Sbjct: 96 STKSETKASVVERFNRTSKEWMWR 119
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 402 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSAS 283
STP +V PP PSN+ + +K S +P T S S
Sbjct: 217 STPQATVQTPPPPPEPSNEPSTSSKPKASPSPSSITTSTS 256
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -2
Query: 796 EREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 677
E ++ +KE CYV+ F ++M A +++ + Y LPD
Sbjct: 392 ETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_50207| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -3
Query: 360 LPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQP 250
L C SR K P Y G RT ++C +P
Sbjct: 118 LVKRTCNSRKKKKPEKRPSSYNGDTDYRTRKQCRYEP 154
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 772 KEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 632
+EK+ L+ E E A ++ LEK +L + +G+ER RC +
Sbjct: 2983 REKIVTSDLESELETERALQANELEKQNKLLEKLSADLGHERSRCED 3029
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 523 NTVLSGGTTMYPGIADRMQKEITALAP 443
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_9926| Best HMM Match : DPPIV_N (HMM E-Value=0)
Length = 1066
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -3
Query: 357 PSNKCGSRNKSTTSLAPPLYTGSASK--RTARRCLQQPAAGC 238
P N+ G++ + +L P++TGS + RT + P+A C
Sbjct: 879 PGNQAGNKTRPLRALRSPIHTGSTLEVDRTRQGTRPDPSARC 920
>SB_8051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 759 ATSLLTSSRRWPPLH-PAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPRSW 607
AT+L T + W P H P +++L P S PS A L + P+ W
Sbjct: 242 ATTLGTKPQPWGPSHNPGDQAKTLGTKPQP-SGPSHNPRDQATTLGTKPKPW 292
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,174,660
Number of Sequences: 59808
Number of extensions: 573268
Number of successful extensions: 1932
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1910
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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