Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a05f
(669 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 388 e-108
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 383 e-107
SB_56| Best HMM Match : Actin (HMM E-Value=0) 382 e-106
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 381 e-106
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 350 5e-97
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 201 4e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_54| Best HMM Match : Actin (HMM E-Value=0) 159 2e-39
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 144 4e-35
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 121 6e-28
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 103 1e-22
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 6e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 47 1e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 41 0.001
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.64
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.64
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.64
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.85
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.85
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.85
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.1
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.1
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.5
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.5
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.5
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.5
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.5
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 3.4
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.4
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.4
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 29 4.5
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 4.5
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 388 bits (956), Expect = e-108
Identities = 179/185 (96%), Positives = 184/185 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLD 653
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 654 LAGRD 668
LAGRD
Sbjct: 181 LAGRD 185
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 383 bits (943), Expect = e-107
Identities = 177/185 (95%), Positives = 183/185 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLD 653
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 654 LAGRD 668
LAGRD
Sbjct: 181 LAGRD 185
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 382 bits (941), Expect = e-106
Identities = 177/183 (96%), Positives = 182/183 (99%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLA 659
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 660 GRD 668
GRD
Sbjct: 182 GRD 184
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 381 bits (938), Expect = e-106
Identities = 176/183 (96%), Positives = 182/183 (99%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLA 659
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 660 GRD 668
GRD
Sbjct: 182 GRD 184
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 350 bits (861), Expect = 5e-97
Identities = 160/167 (95%), Positives = 166/167 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 614
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY 167
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 201 bits (491), Expect = 4e-52
Identities = 93/182 (51%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Frame = +3
Query: 132 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 305
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 306 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 483 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 662
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+Y G+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 663 RD 668
RD
Sbjct: 187 RD 188
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 386
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 129 bits (312), Expect = 2e-30
Identities = 60/70 (85%), Positives = 66/70 (94%)
Frame = +3
Query: 459 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHA 638
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 639 ILRLDLAGRD 668
I+RLDLAGRD
Sbjct: 138 IIRLDLAGRD 147
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 159 bits (386), Expect = 2e-39
Identities = 72/101 (71%), Positives = 84/101 (83%)
Frame = +3
Query: 366 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 545
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 546 ASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRD 668
ASGRTTG V D GDGVSHTVP+Y GY LPHA R+DLAGRD
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRD 2229
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 144 bits (350), Expect = 4e-35
Identities = 60/85 (70%), Positives = 78/85 (91%)
Frame = +3
Query: 414 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 593
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 594 SHTVPIYXGYALPHAILRLDLAGRD 668
SH+VPIY G+A+PH+I+R D+AGRD
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRD 210
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 121 bits (291), Expect = 6e-28
Identities = 56/63 (88%), Positives = 59/63 (93%)
Frame = +3
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLA 659
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIY GYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 660 GRD 668
GRD
Sbjct: 61 GRD 63
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 103 bits (248), Expect = 1e-22
Identities = 45/113 (39%), Positives = 74/113 (65%)
Frame = +3
Query: 324 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 503
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 504 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 662
PA ++ +VL+ +A+GR+ G+V+DSG + VP++ GY L AI+R LAG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAG 115
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.0 bits (134), Expect = 6e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +3
Query: 126 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 305
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 306 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 480 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYXGYALPHAI 641
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 642 LR 647
R
Sbjct: 384 RR 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 108 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 278
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 279 GDEAQSKRGILTL 317
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +3
Query: 525 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 662
Q LSLYASG T G+ L SG + IY G+ L H + L++ G
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGG 812
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 252 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 561 TGIVLDSGDGVSHTVPI 611
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 492 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRD 668
++ T A+ + S RT TG V+DSGDGV+H +P+ GY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -2
Query: 236 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 120
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +3
Query: 369 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 548
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 549 SGRTTGI----VLDSGDGVSHTVPIYXGYALP 632
+GI V D D + T Y LP
Sbjct: 572 YSAVSGIVEQRVTDGTDEIHSTDVNLAKYNLP 603
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 315 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 467
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.64
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 456 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 182 CETGLAHT 159
CET L T
Sbjct: 252 CETQLVPT 259
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 661 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 482
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 481 IWVIFSLLALGLR 443
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 661 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 524
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -3
Query: 661 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 524
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.85
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 182 CETGLAHT 159
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.85
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 182 CETGLAHT 159
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.85
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 182 CETGLAHT 159
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 182 CETGLAHT 159
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 182 CETGLAHT 159
CET L T
Sbjct: 288 CETQLVLT 295
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 601 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 449
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 448 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 284
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 182 CETGLAHT 159
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 440 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 532
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 520 PSKPCSRCTRPVVPP 564
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 293 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 159
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 449 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXIRT 628
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 629 PPRHPASGLSR 661
P HP GLS+
Sbjct: 248 APDHP-HGLSK 257
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/75 (28%), Positives = 28/75 (37%)
Frame = +2
Query: 437 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 616
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 617 XIRTPPRHPASGLSR 661
T P HP G+S+
Sbjct: 376 SKSTAPDHP-HGVSK 389
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +2
Query: 443 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXI 622
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 623 RTPPRHPASGLSRSR 667
+T + P+ +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 479 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXIR 625
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 182 CETGLAHT 159
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.4
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 182 CETGLAHT 159
CET L T
Sbjct: 61 CETQLVLT 68
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 473 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRXIRTPPRH 640
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -2
Query: 299 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 135
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 134 GNFFVAHLE 108
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 444 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 595 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 422
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 421 G 419
G
Sbjct: 147 G 147
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSC 573
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,751,318
Number of Sequences: 59808
Number of extensions: 582242
Number of successful extensions: 2034
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2021
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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