Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a04r
(747 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0471 + 8734292-8734788,8735168-8735654,8735766-8736551 36 0.034
01_06_1562 - 38268514-38268902,38269310-38269451,38269517-382698... 36 0.045
06_03_0700 + 23650275-23650299,23650381-23652350 35 0.079
12_01_0558 + 4521616-4522296 32 0.42
10_08_0333 - 16850267-16851802 32 0.42
03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133... 31 0.97
04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424... 31 1.3
03_02_0870 + 11964135-11964224,11965013-11965175,11965262-119653... 30 2.2
04_04_0705 - 27406405-27406424,27406425-27409260 29 3.0
02_01_0759 - 5628913-5630870,5631023-5631047 29 3.0
01_05_0528 - 22976627-22976833,22976944-22976992,22977052-229770... 29 3.0
07_03_1554 + 27659995-27660093,27661084-27661120,27661204-276612... 29 3.9
03_01_0185 - 1485023-1485733 29 3.9
11_06_0708 + 26475306-26478404 29 5.2
11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166 29 5.2
08_02_0437 - 17177093-17177245,17178261-17178327,17178655-17178674 29 5.2
04_03_0198 - 12555866-12556382,12556584-12556822 29 5.2
03_05_0412 + 23993452-23994068,23996249-23996350,23996799-239969... 29 5.2
02_01_0405 - 2952434-2955583 29 5.2
01_05_0449 - 22349299-22349310,22349842-22350011,22350232-223503... 29 5.2
12_01_0054 + 463743-464414,464896-465024,465336-465440,465524-46... 28 6.9
11_01_0054 + 416626-417297,417757-417885,418197-418301,418385-41... 28 6.9
10_08_0352 + 17091637-17091945,17092049-17096617,17096975-170971... 28 6.9
12_02_0581 - 20785198-20785962,20786107-20786649 28 9.1
02_03_0110 - 15350939-15352162,15352591-15353310,15353776-15353949 28 9.1
01_06_0069 - 26169818-26169904,26170186-26170893 28 9.1
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 28 9.1
>03_02_0471 + 8734292-8734788,8735168-8735654,8735766-8736551
Length = 589
Score = 35.9 bits (79), Expect = 0.034
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = -1
Query: 678 SSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQINGFNDSVLKAWVEAGTARNLVALD 499
+++++LDL T LSTE ++ R PNL L + G D L+ V A T + L L
Sbjct: 297 AALKKLDLQFTFLSTEDHCQLVQRCPNLEILEVRDVIG--DRGLE--VVAQTCKKLQRLR 352
Query: 498 VDSSDN----LSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQSVLQLLNNAKILIMGT 331
V+ D+ L DE H +++ G V G PH+ + W + + NA + +GT
Sbjct: 353 VERGDDDQGGLEDE--HGMVTQVGLM---AVAQGCPHL--EYWAVHVTDITNAALEAIGT 405
>01_06_1562 -
38268514-38268902,38269310-38269451,38269517-38269865,
38270848-38271107
Length = 379
Score = 35.5 bits (78), Expect = 0.045
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Frame = -1
Query: 672 VQELDLTAT-DLSTECLIDMLTRIPNLRFLSAGQINGFNDSVLKAWVEAGTARNLVALDV 496
++ELDL+ + LS L + P+L L+ + F+D+ L A++ + +NL L++
Sbjct: 133 LRELDLSRSFRLSDRSLYALAHGCPHLTRLNISGCSNFSDAAL-AYLSS-QCKNLKCLNL 190
Query: 495 DSSDN-LSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQSVLQLLNNAKILIMGTQERL 319
+SD AL G QL L LG +TD+ V L + L +
Sbjct: 191 CGCVRAVSDRALQAIACNCG-QLQSLNLGWCDSVTDK---GVTSLASGCPEL--RALDLC 244
Query: 318 GINIHVDQLMDGIANSCPNLERLEL 244
G + D+ + +AN CP+L L L
Sbjct: 245 GCVLITDESVVALANGCPHLRSLGL 269
>06_03_0700 + 23650275-23650299,23650381-23652350
Length = 664
Score = 34.7 bits (76), Expect = 0.079
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -1
Query: 603 PNLRFLSAGQINGFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHG 424
P L + + D+ L +++ + LV +D++ +NL+D + + HGS L
Sbjct: 501 PQLENVDLSGLGAVTDNGLLPLIKSSES-GLVHVDLNGCENLTDATVSALVKAHGSSLAR 559
Query: 423 LVLGGMPHITD 391
L L G ITD
Sbjct: 560 LSLEGCSRITD 570
>12_01_0558 + 4521616-4522296
Length = 226
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 322 TLLSSHYKDLSVVEQLQHALPQLVGDVRH 408
TLL HY DL+ V +H P LV +RH
Sbjct: 193 TLLDPHYTDLAYVRDTKHWPPSLVDSLRH 221
>10_08_0333 - 16850267-16851802
Length = 511
Score = 32.3 bits (70), Expect = 0.42
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = -1
Query: 663 LDLTATDLSTECLIDMLTRIPNLRFLSAGQINGFNDSVLKAWVEAGTARNLVALDVDSSD 484
+DL+ LS EC+ D LT + LRFL+ + N + + + G+ +NL +LD+ S++
Sbjct: 318 IDLSGNSLS-ECIPDELTNLQGLRFLNLSR-NNLSCGIPE---NIGSLKNLESLDLSSNE 372
>03_06_0352 -
33312443-33312652,33312747-33312854,33313224-33313397,
33313489-33313695,33313700-33313987,33314087-33314319,
33314450-33315263
Length = 677
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -3
Query: 736 PDERMQSSIRLRNASGVGEILRSGIGFDRHRLVDRVPDRHAHPDTEPALSERR 578
P R+ S N GV L G+G H V P R A P++EP ++ERR
Sbjct: 147 PTHRLTSGGGGGNGGGVTVELPCGMGVGSHVTVVARP-RPARPESEPRIAERR 198
>04_04_1574 - 34536744-34537136,34541247-34541405,34541497-34542411,
34543642-34543731,34544324-34544390,34544483-34544676,
34544770-34545510,34545596-34545661,34545783-34545908,
34545978-34546073,34546153-34546521,34546602-34546724,
34546802-34546906,34547394-34547531,34547665-34547760,
34548018-34548275
Length = 1311
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = -1
Query: 399 ITDQLWQSVLQLLNNAKILIMGTQERL-GIN-IH-VDQLMDGIANSCPNLERLELRWDPE 229
ITD+ Q +L N + L + E + I +H +D+L + + CPNL+ +EL P
Sbjct: 1011 ITDEDVQRMLSKCNLLEFLEISYCEMVTSIRMLHPLDRLKHLVVDICPNLQEIELNCSPT 1070
Query: 228 NLRFS 214
L++S
Sbjct: 1071 TLKYS 1075
>03_02_0870 + 11964135-11964224,11965013-11965175,11965262-11965380,
11965971-11966083,11966179-11966234,11966320-11966417,
11966588-11966725,11966820-11967125,11967208-11967471,
11967587-11967754,11967838-11968056,11968115-11968158,
11968761-11968830,11968949-11969110,11969672-11969779,
11969873-11969910,11970121-11970265,11970800-11970926,
11971037-11971230,11971529-11971659,11972014-11972089,
11972218-11972328,11972465-11972647,11973264-11973407,
11973946-11973969,11974555-11974728,11974808-11975155,
11975232-11975561,11975776-11975961,11976052-11977026,
11977145-11977399
Length = 1852
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 533 STQALSTESLNPLIWPALR--KRRFGIRVSMSIRHSVDK-SVAVKSNS*TEDFSHSTCIT 703
ST ESL+P++ L + VS+ + +DK SVA S S T D++ C+T
Sbjct: 1138 STARALRESLHPVLRQKLELWEENLSTAVSLEVLGIIDKFSVAAASRSITTDYAKLDCVT 1197
>04_04_0705 - 27406405-27406424,27406425-27409260
Length = 951
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = -1
Query: 597 LRFLSAGQINGFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLV 418
LRF+ + ++G +D + AWV+ R+ VA D++ + +DE + FLS HG HG
Sbjct: 49 LRFVDS--LHG-SDPLADAWVDQ--VRD-VAFDLEDA---ADE--YAFLSGHGFFRHGAN 97
Query: 417 LGGMPHITDQLWQS 376
LG ++ +LW++
Sbjct: 98 LGAWFALSRRLWRA 111
>02_01_0759 - 5628913-5630870,5631023-5631047
Length = 660
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 513 LVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITD 391
LV +D+ N++D A+ + HG L + L G ITD
Sbjct: 525 LVKVDLSGCKNITDAAVSTLVKGHGKSLKQVSLEGCSKITD 565
>01_05_0528 -
22976627-22976833,22976944-22976992,22977052-22977077,
22977201-22977276,22977432-22977529,22977986-22978066,
22978244-22978315,22978468-22978498,22978513-22979246
Length = 457
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/61 (31%), Positives = 32/61 (52%)
Frame = -1
Query: 402 HITDQLWQSVLQLLNNAKILIMGTQERLGINIHVDQLMDGIANSCPNLERLELRWDPENL 223
H Q+ S L ++ +L++ + R I++H + GIAN C NL+ ++L E L
Sbjct: 199 HRARQVESSSLYPFFHSTLLLLSSNLR-SIHVHGSGKLLGIANRCGNLQVMQLDEPIEGL 257
Query: 222 R 220
R
Sbjct: 258 R 258
>07_03_1554 +
27659995-27660093,27661084-27661120,27661204-27661280,
27662272-27662342,27662512-27662590,27662726-27662828,
27662963-27663082,27663180-27663257,27663416-27663471,
27663588-27663657,27664179-27664266,27664503-27664800,
27664943-27665158,27665521-27665841,27666054-27666103,
27666493-27666553,27666633-27666716,27666926-27667039,
27667134-27667300,27667559-27667628,27668328-27668507,
27668619-27668807
Length = 875
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -1
Query: 513 LVAL-DVDSSDNLSDEALHRFLSRHGSQLHGLV 418
L+AL D+D S + ++AL RFL RHG ++ G++
Sbjct: 172 LLALEDIDGSPSFLEKAL-RFLERHGIKVEGIL 203
>03_01_0185 - 1485023-1485733
Length = 236
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1
Query: 522 ARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQLW 382
A+ +V ++ ++ L E LHRFLS + S+ H L+L + ++L+
Sbjct: 165 AQMIVENEITATPELR-ELLHRFLSLNSSRHHHLILRAFADVCEELF 210
>11_06_0708 + 26475306-26478404
Length = 1032
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 348 ILIMGTQERLGINIHVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQK 199
IL + + + L I ++ Q+ + + N CPNL +E+ E L S QK
Sbjct: 954 ILFVQSCQGLEIISNLPQVRELLVNHCPNLRHVEMLGGLEQLWLSKNMQK 1003
>11_06_0699 + 26394482-26396336,26396807-26397480,26397873-26398166
Length = 940
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 348 ILIMGTQERLGINIHVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQK 199
IL + + + L I ++ Q+ + + N CPNL +E+ E L S QK
Sbjct: 770 ILFVQSCQGLEIISNLPQVRELLVNHCPNLRHVEMLGGLEQLWLSKNMQK 819
>08_02_0437 - 17177093-17177245,17178261-17178327,17178655-17178674
Length = 79
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 524 VPASTQALSTE-SLNPLIWPALRKRRFGIRVSMSIRHSVDK--SVAVKSNS 667
VP T +S + +L+P + K +FG+RV +R S +K S+A+ NS
Sbjct: 27 VPQVTTKISEDYALHPPVHTTRDKYKFGMRVIEEMRSSANKKTSIAITGNS 77
>04_03_0198 - 12555866-12556382,12556584-12556822
Length = 251
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 559 IEPVDLAGAQKAQVRYPGEHVYQALGRQVCGGQIQFLNGGFLPLHLH 699
+ P ++A + R+PG + G + ++ F GG +PLH H
Sbjct: 66 VNPFNIALSSAFSTRFPGVN-----GLDISAARVDFSPGGIVPLHSH 107
>03_05_0412 +
23993452-23994068,23996249-23996350,23996799-23996994,
23997075-23997259,23997394-23997498,23997625-23997722,
23997832-23998067,23998314-23998382,23999768-23999833,
24000513-24000611,24000688-24000750
Length = 611
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -1
Query: 387 LWQSVLQLLNNAKILIMGTQERLGINIHVDQLMDGIANSCPNLERLEL 244
L +SV+ N ++I + TQ+ V LMDG+ +CPNL+ + +
Sbjct: 302 LSKSVINCPNMSEISLCFTQQSNDCTDLVT-LMDGLGRTCPNLKNMHI 348
>02_01_0405 - 2952434-2955583
Length = 1049
Score = 28.7 bits (61), Expect = 5.2
Identities = 37/145 (25%), Positives = 65/145 (44%)
Frame = -1
Query: 678 SSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQINGFNDSVLKAWVEAGTARNLVALD 499
+S++ +DL + S E + + +PNL+ L + N F+ + ++ T NL AL
Sbjct: 325 TSLKIIDLNNNNFSGELIYVNFSNLPNLKTLDLMR-NNFSGEIPES---IYTCSNLTALR 380
Query: 498 VDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQSVLQLLNNAKILIMGTQERL 319
V S+ LH LS+ L L + + LQ+L+++ L T +
Sbjct: 381 VSSN------KLHGQLSKGLGNLKSLSFLSLAGNCLTNIANALQILSSSSNL---TTLLI 431
Query: 318 GINIHVDQLMDGIANSCPNLERLEL 244
G N +++ DG + NL+ L L
Sbjct: 432 GHNFMNERMPDGSIDGFENLQVLSL 456
>01_05_0449 -
22349299-22349310,22349842-22350011,22350232-22350303,
22351740-22351806,22352516-22352647,22352844-22353070,
22353150-22353359,22353565-22353687,22353971-22354075,
22354324-22354435
Length = 409
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = -1
Query: 486 DNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQSVLQLLNNAKILIMGTQERLGIN 310
D LSDE R ++ + L+ +LGG H ++ + V+ L+N + ++ + +QE + +N
Sbjct: 79 DMLSDEQSRRHINTGSADLNN-ILGGGIH-CKEVTEIVIGLINTSSLIQVVSQESVKLN 135
>12_01_0054 +
463743-464414,464896-465024,465336-465440,465524-465917,
466325-466422,466505-466753,466920-466979
Length = 568
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDYVMQVEWEKSS-VQELDLTATDLSTE 631
L L M CSL S +Q+ + + ++ELDLT TDL E
Sbjct: 394 LISLRMESCSLVSSKGLQLIGRRCTHLEELDLTDTDLDDE 433
>11_01_0054 +
416626-417297,417757-417885,418197-418301,418385-418778,
419186-419283,419366-419614,419784-419843
Length = 568
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDYVMQVEWEKSS-VQELDLTATDLSTE 631
L L M CSL S +Q+ + + ++ELDLT TDL E
Sbjct: 394 LISLRMESCSLVSSKGLQLIGRRCTHLEELDLTDTDLDDE 433
>10_08_0352 + 17091637-17091945,17092049-17096617,17096975-17097187,
17097266-17097494,17097857-17097981
Length = 1814
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -1
Query: 576 QINGFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRH-GSQLHGL 421
+I+GF S L VE GTAR S DN+ D + RF++R G +LH L
Sbjct: 1077 EIDGFFSSKL---VETGTAR--------SEDNVPDRNMERFMTRSTGRRLHKL 1118
>12_02_0581 - 20785198-20785962,20786107-20786649
Length = 435
Score = 27.9 bits (59), Expect = 9.1
Identities = 26/92 (28%), Positives = 45/92 (48%)
Frame = -1
Query: 738 LLMNGCSLRSDYVMQVEWEKSSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQINGFN 559
L++ G ++ D M+ +Q L+L T+ + +L P+L L+ Q NGF+
Sbjct: 318 LVLCGANIFDDEGMKALSSAQFLQTLELMDCIHITDAGMRLLADSPSLVNLTLRQCNGFS 377
Query: 558 DSVLKAWVEAGTARNLVALDVDSSDNLSDEAL 463
D + A V AR L +L V+ +S +A+
Sbjct: 378 DVGVGAVV---CARKLDSLVVEGYGRVSRKAV 406
>02_03_0110 - 15350939-15352162,15352591-15353310,15353776-15353949
Length = 705
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +1
Query: 517 PSSPSF--HPSFKYRVIEPVDLAGAQKAQVRYPGEHVYQALGRQVCGGQIQFLNGG 678
P PS+ P Y V+ A V GEH+Y GR+ +NGG
Sbjct: 454 PQFPSWGCDPWAPYPVVPVTHFQQGWNAPVAIGGEHLYNQRGREARASDAIVINGG 509
>01_06_0069 - 26169818-26169904,26170186-26170893
Length = 264
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -1
Query: 513 LVALDVDSSDNLSDEALHRFLSRHGSQLHGL--VLGGMPHITDQ 388
++ +D+D +D+ + + L R ++ HG+ L G+ V G ITDQ
Sbjct: 201 MMEVDLDRADSATLDELDRMVAEHGAALAGVVKVKQGALVITDQ 244
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 693 VEWEKSSVQELDLTATDLSTECLIDMLTRIPN 598
++W S++ L+ + LS +C D +TRIP+
Sbjct: 170 LDWLSSNIANKYLSRSHLSIDCRPDWMTRIPH 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,338,734
Number of Sequences: 37544
Number of extensions: 368369
Number of successful extensions: 1499
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1498
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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