Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a04r
         (747 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    25   3.3  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   3.3  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            24   4.3  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   4.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.3  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    24   4.3  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   7.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   7.6  

>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 455 SCRGTARSCTGWCWAGC 405
           +C GT   C G C+A C
Sbjct: 71  NCYGTVLDCAGRCYAEC 87


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +3

Query: 585 SESAGSVSG*ACLS-GTRSTSLWRSN 659
           S++A    G  C + GTR+T+LWR N
Sbjct: 166 SQTATRRLGLCCTNCGTRTTTLWRRN 191


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 410 GCRTSPTSCGRACCSCSTT 354
           GC T+PT C    C  +TT
Sbjct: 7   GCFTNPTECNNTECIDTTT 25


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 331 SSHYKDLSVVEQLQHALPQLVGD 399
           S HY +  + E L+HALPQ + D
Sbjct: 45  SFHYSETDI-EYLKHALPQGIED 66


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 477 TGCPTSPRPAPPGS*QSQLP 536
           TG PT P+P  PG    Q P
Sbjct: 203 TGTPTQPQPPRPGGMYPQPP 222


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 358 VEQLQHALPQLVGDVRHPAQHQPV 429
           + QL HA+P LV    HP   Q V
Sbjct: 336 LSQLAHAMPSLVDVKAHPDLQQSV 359


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 148 ERRPVLRNREG*LRARRSHYR 86
           +RRP LR+  G LRA R   R
Sbjct: 42  KRRPALRSTSGVLRAARPERR 62


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -3

Query: 538 GGSWDC*EPGGAGRGLVGQPVG 473
           GG  D  E  GAGRG VG  +G
Sbjct: 539 GGGSDGPEYEGAGRGGVGSGIG 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,012
Number of Sequences: 2352
Number of extensions: 13254
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)