BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a04r
(747 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL357752-3|CAI41487.1| 1232|Homo sapiens kinesin family member 4... 33 1.1
AL139398-5|CAI41024.1| 1232|Homo sapiens kinesin family member 4... 33 1.1
AJ271784-1|CAB75427.1| 1232|Homo sapiens chromokinesin protein. 33 1.1
AF277375-1|AAF86334.1| 1103|Homo sapiens chromokinesin protein. 33 1.1
AF179308-1|AAD51855.1| 1232|Homo sapiens KIF4 protein. 33 1.1
AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily mot... 33 1.1
AB208797-1|BAD92034.1| 1235|Homo sapiens Chromosome-associated k... 33 1.1
AB051517-1|BAB21821.1| 787|Homo sapiens KIAA1730 protein protein. 32 1.9
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 31 3.3
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 31 3.3
X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin prot... 31 4.4
DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein. 31 4.4
BC093038-1|AAH93038.1| 357|Homo sapiens NDRG family member 2 pr... 31 4.4
BC011240-1|AAH11240.1| 360|Homo sapiens NDRG2 protein protein. 31 4.4
BC010458-1|AAH10458.1| 357|Homo sapiens NDRG family member 2 pr... 31 4.4
AY028430-1|AAK50340.1| 357|Homo sapiens N-myc downstream regula... 31 4.4
AF159092-1|AAD43131.2| 357|Homo sapiens syld709613 protein prot... 31 4.4
AF087872-1|AAM10500.1| 356|Homo sapiens cytoplasmic protein Ndr... 31 4.4
AB033074-1|BAA86562.1| 368|Homo sapiens KIAA1248 protein protein. 31 4.4
AF304051-1|AAL08624.1| 371|Homo sapiens NDR1-related protein ND... 31 5.8
BC020757-1|AAH20757.1| 62|Homo sapiens MT1G protein protein. 30 7.7
AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated prot... 30 7.7
>AL357752-3|CAI41487.1| 1232|Homo sapiens kinesin family member 4A
protein.
Length = 1232
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTTLRS 345
SC GWC GCR + CG CC T R+
Sbjct: 1087 SCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRN 1119
>AL139398-5|CAI41024.1| 1232|Homo sapiens kinesin family member 4A
protein.
Length = 1232
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTTLRS 345
SC GWC GCR + CG CC T R+
Sbjct: 1087 SCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRN 1119
>AJ271784-1|CAB75427.1| 1232|Homo sapiens chromokinesin protein.
Length = 1232
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTTLRS 345
SC GWC GCR + CG CC T R+
Sbjct: 1087 SCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRN 1119
>AF277375-1|AAF86334.1| 1103|Homo sapiens chromokinesin protein.
Length = 1103
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTTLRS 345
SC GWC GCR + CG CC T R+
Sbjct: 958 SCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRN 990
>AF179308-1|AAD51855.1| 1232|Homo sapiens KIF4 protein.
Length = 1232
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTTLRS 345
SC GWC GCR + CG CC T R+
Sbjct: 1087 SCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRN 1119
>AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily motor
KIF4 protein.
Length = 1232
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTTLRS 345
SC GWC GCR + CG CC T R+
Sbjct: 1087 SCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRN 1119
>AB208797-1|BAD92034.1| 1235|Homo sapiens Chromosome-associated
kinesin KIF4A variant protein.
Length = 1235
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTTLRS 345
SC GWC GCR + CG CC T R+
Sbjct: 1090 SCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRN 1122
>AB051517-1|BAB21821.1| 787|Homo sapiens KIAA1730 protein protein.
Length = 787
Score = 32.3 bits (70), Expect = 1.9
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -1
Query: 657 LTATDLSTECLIDMLTRIPNLRFLSAGQINGF-NDSVLKAWVEAGTARNLVALDVDSSDN 481
L ++T ++D++ + +L L F +D L+ + NLV+LDV +
Sbjct: 262 LKCLKMTTTQILDVVRELKHLNHLDISDDKQFTSDIALRLLEQKDILPNLVSLDVSGRKH 321
Query: 480 LSDEALHRFLSRHGS-QLHGLV 418
++D+A+ F+ + S Q GL+
Sbjct: 322 VTDKAVEAFIQQRPSMQFVGLL 343
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = -2
Query: 455 SCRGTARSCTGWCWAGCRTSPTSCGRACCSCSTTLRSL*WELRSVSGSTFTLTS*W 288
SCR + S T W TS TSC S+T S W SG++FT S W
Sbjct: 29 SCRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSC-WS----SGTSFTSCSCW 79
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/56 (37%), Positives = 25/56 (44%)
Frame = -2
Query: 455 SCRGTARSCTGWCWAGCRTSPTSCGRACCSCSTTLRSL*WELRSVSGSTFTLTS*W 288
SCR + S T W TS TSC S+T S W SG++FT S W
Sbjct: 29 SCRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSC-WS----SGTSFTSCSCW 79
>X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin
protein.
Length = 169
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 458 ASCRGTARSCTGWCWAGCR-TSPTSCGRACC 369
+SC G SC G C +GCR P+ C CC
Sbjct: 12 SSCGGCDSSC-GSCGSGCRGCGPSCCAPVCC 41
>DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein.
Length = 1185
Score = 31.1 bits (67), Expect = 4.4
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = -2
Query: 434 SCTGWCW---AGCRTSPTSCGRACCSCSTT 354
SC GWC GCR + CG CSC T
Sbjct: 1089 SCKGWCGNKQCGCRKQKSDCG-VDCSCDPT 1117
>BC093038-1|AAH93038.1| 357|Homo sapiens NDRG family member 2
protein.
Length = 357
Score = 31.1 bits (67), Expect = 4.4
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 138 LARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 197
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDI 187
+ Q I PNL+ +EL W+ N R ++ DI
Sbjct: 198 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI 237
>BC011240-1|AAH11240.1| 360|Homo sapiens NDRG2 protein protein.
Length = 360
Score = 31.1 bits (67), Expect = 4.4
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 152 LARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 211
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDI 187
+ Q I PNL+ +EL W+ N R ++ DI
Sbjct: 212 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI 251
>BC010458-1|AAH10458.1| 357|Homo sapiens NDRG family member 2
protein.
Length = 357
Score = 31.1 bits (67), Expect = 4.4
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 138 LARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 197
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDI 187
+ Q I PNL+ +EL W+ N R ++ DI
Sbjct: 198 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI 237
>AY028430-1|AAK50340.1| 357|Homo sapiens N-myc downstream regulator
2 protein.
Length = 357
Score = 31.1 bits (67), Expect = 4.4
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 138 LARYALNHPDTVEGLVLINIGPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 197
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDI 187
+ Q I PNL+ +EL W+ N R ++ DI
Sbjct: 198 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI 237
>AF159092-1|AAD43131.2| 357|Homo sapiens syld709613 protein
protein.
Length = 357
Score = 31.1 bits (67), Expect = 4.4
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 138 LARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 197
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDI 187
+ Q I PNL+ +EL W+ N R ++ DI
Sbjct: 198 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI 237
>AF087872-1|AAM10500.1| 356|Homo sapiens cytoplasmic protein Ndr1
protein.
Length = 356
Score = 31.1 bits (67), Expect = 4.4
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 137 LARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 196
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDI 187
+ Q I PNL+ +EL W+ N R ++ DI
Sbjct: 197 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI 236
>AB033074-1|BAA86562.1| 368|Homo sapiens KIAA1248 protein protein.
Length = 368
Score = 31.1 bits (67), Expect = 4.4
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 149 LARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 208
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDI 187
+ Q I PNL+ +EL W+ N R ++ DI
Sbjct: 209 ELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDI 248
>AF304051-1|AAL08624.1| 371|Homo sapiens NDR1-related protein NDR2
protein.
Length = 371
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = -1
Query: 465 LHRFLSRHGSQLHGLVLGGM-PHITDQL-WQS--VLQLLNNAKILIMG---TQERLGINI 307
L R+ H + GLVL + P+ + W + + L ++ +I+G +QE L N
Sbjct: 152 LARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNS 211
Query: 306 HVDQLMDGIANSCPNLERLELRWDPENLR 220
+ Q I PNL+ +EL W+ N R
Sbjct: 212 ELIQKYRNIITHAPNLDNIELYWNSYNNR 240
>BC020757-1|AAH20757.1| 62|Homo sapiens MT1G protein protein.
Length = 62
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = -2
Query: 455 SCRGTARSCTGWCWAGCRTSP---TSCGRACCSC 363
SC SCT C + C+ TSC ++CCSC
Sbjct: 6 SCAAAGVSCT--CASSCKCKECKCTSCKKSCCSC 37
>AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated protein
protein.
Length = 278
Score = 30.3 bits (65), Expect = 7.7
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = -2
Query: 452 CRGTARSC---TGWCWAGCRTSPTSCGRA--CCSCST 357
C+G SC G C +GC + CG CCSCS+
Sbjct: 183 CKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSS 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,955,712
Number of Sequences: 237096
Number of extensions: 1859791
Number of successful extensions: 10497
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 9730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10450
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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