Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a04r
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 220 7e-58
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 220 7e-58
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 220 7e-58
Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z92781-2|CAB07181.2| 397|Caenorhabditis elegans Hypothetical pr... 31 0.87
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 31 1.1
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 30 1.5
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 30 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.5
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 28 6.1
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr... 28 8.1
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 28 8.1
U41033-6|AAA82378.1| 859|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 220 bits (538), Expect = 7e-58
Identities = 105/249 (42%), Positives = 158/249 (63%), Gaps = 4/249 (1%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDYVMQVEWEKSSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQIN 568
L L + L ++ V V+WEK+ ++ELD+ T+L+++ LI +LTR+P+LR+L A +
Sbjct: 287 LKTLFLAHTKLDNNIVKMVDWEKTRIEELDIKGTELNSDALISILTRLPHLRWLDASWLE 346
Query: 567 GFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQ 388
D VL+AW + +L L++D+ D+++++AL + RHG Q HGL LGG + +
Sbjct: 347 CMTDQVLEAWQNSNAMGSLQFLNMDTCDSINEQALVDMIKRHGHQFHGLCLGGQHKLLEY 406
Query: 387 LWQSVLQLLNNAKILIMGTQE----RLGINIHVDQLMDGIANSCPNLERLELRWDPENLR 220
W +++ L N ++++MG E ++ IHVDQ +D IA +CP L RLE+RWD E LR
Sbjct: 407 FWMNMIPQLRNIRVMVMGIAEDCCPKVVAKIHVDQFVDCIAQNCPRLTRLEVRWDDETLR 466
Query: 219 FSDKSQKAIDILRXXXXXXXXXXLSDGRYYEIVKANFERADRTTVVRTSTNCRVSNYYLL 40
FSDKS K ID+LR LSDG+YYE+V++NFERADR +VVRT+ CR +
Sbjct: 467 FSDKSSKFIDVLRMKCLMLHSIVLSDGQYYELVRSNFERADRMSVVRTTEMCRTGLLHCS 526
Query: 39 SNYNDLIFN 13
+N L+FN
Sbjct: 527 RYFNKLLFN 535
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 220 bits (538), Expect = 7e-58
Identities = 105/249 (42%), Positives = 158/249 (63%), Gaps = 4/249 (1%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDYVMQVEWEKSSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQIN 568
L L + L ++ V V+WEK+ ++ELD+ T+L+++ LI +LTR+P+LR+L A +
Sbjct: 270 LKTLFLAHTKLDNNIVKMVDWEKTRIEELDIKGTELNSDALISILTRLPHLRWLDASWLE 329
Query: 567 GFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQ 388
D VL+AW + +L L++D+ D+++++AL + RHG Q HGL LGG + +
Sbjct: 330 CMTDQVLEAWQNSNAMGSLQFLNMDTCDSINEQALVDMIKRHGHQFHGLCLGGQHKLLEY 389
Query: 387 LWQSVLQLLNNAKILIMGTQE----RLGINIHVDQLMDGIANSCPNLERLELRWDPENLR 220
W +++ L N ++++MG E ++ IHVDQ +D IA +CP L RLE+RWD E LR
Sbjct: 390 FWMNMIPQLRNIRVMVMGIAEDCCPKVVAKIHVDQFVDCIAQNCPRLTRLEVRWDDETLR 449
Query: 219 FSDKSQKAIDILRXXXXXXXXXXLSDGRYYEIVKANFERADRTTVVRTSTNCRVSNYYLL 40
FSDKS K ID+LR LSDG+YYE+V++NFERADR +VVRT+ CR +
Sbjct: 450 FSDKSSKFIDVLRMKCLMLHSIVLSDGQYYELVRSNFERADRMSVVRTTEMCRTGLLHCS 509
Query: 39 SNYNDLIFN 13
+N L+FN
Sbjct: 510 RYFNKLLFN 518
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 220 bits (538), Expect = 7e-58
Identities = 105/249 (42%), Positives = 158/249 (63%), Gaps = 4/249 (1%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDYVMQVEWEKSSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQIN 568
L L + L ++ V V+WEK+ ++ELD+ T+L+++ LI +LTR+P+LR+L A +
Sbjct: 304 LKTLFLAHTKLDNNIVKMVDWEKTRIEELDIKGTELNSDALISILTRLPHLRWLDASWLE 363
Query: 567 GFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQ 388
D VL+AW + +L L++D+ D+++++AL + RHG Q HGL LGG + +
Sbjct: 364 CMTDQVLEAWQNSNAMGSLQFLNMDTCDSINEQALVDMIKRHGHQFHGLCLGGQHKLLEY 423
Query: 387 LWQSVLQLLNNAKILIMGTQE----RLGINIHVDQLMDGIANSCPNLERLELRWDPENLR 220
W +++ L N ++++MG E ++ IHVDQ +D IA +CP L RLE+RWD E LR
Sbjct: 424 FWMNMIPQLRNIRVMVMGIAEDCCPKVVAKIHVDQFVDCIAQNCPRLTRLEVRWDDETLR 483
Query: 219 FSDKSQKAIDILRXXXXXXXXXXLSDGRYYEIVKANFERADRTTVVRTSTNCRVSNYYLL 40
FSDKS K ID+LR LSDG+YYE+V++NFERADR +VVRT+ CR +
Sbjct: 484 FSDKSSKFIDVLRMKCLMLHSIVLSDGQYYELVRSNFERADRMSVVRTTEMCRTGLLHCS 543
Query: 39 SNYNDLIFN 13
+N L+FN
Sbjct: 544 RYFNKLLFN 552
>Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDYVMQVEWEKSSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQIN 568
L CL +NGC + SD + V ++ ++E+ + T + + + + P L ++S +
Sbjct: 434 LRCLNINGCRMVSDKGLAVLAKRCPLREVRIRGTACTDKSIYTLAQFCPELEWISYADYS 493
Query: 567 G---FNDSVLK 544
G F+D+ L+
Sbjct: 494 GRPKFSDAALQ 504
>Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 31.9 bits (69), Expect = 0.50
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDYVMQVEWEKSSVQELDLTATDLSTECLIDMLTRIPNLRFLSAGQIN 568
L CL +NGC + SD + V ++ ++E+ + T + + + + P L ++S +
Sbjct: 434 LRCLNINGCRMVSDKGLAVLAKRCPLREVRIRGTACTDKSIYTLAQFCPELEWISYADYS 493
Query: 567 G---FNDSVLK 544
G F+D+ L+
Sbjct: 494 GRPKFSDAALQ 504
>Z92781-2|CAB07181.2| 397|Caenorhabditis elegans Hypothetical
protein F09C3.3 protein.
Length = 397
Score = 31.1 bits (67), Expect = 0.87
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = -1
Query: 495 DSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQS-VLQLLNN--AKILIMGTQE 325
D+++ S E RF+SRH ++H L+ + I W+ +LQ +N+ +I++ E
Sbjct: 194 DNTERFSIEYSERFISRH--EIHDLLARDLHRIVFLDWRPYLLQAINSNCERIVLECYVE 251
Query: 324 RLGINIHVDQLMDGIANSCPNLERLELRWDPENLRFSDKSQKAIDIL 184
+N + M G S P ++ L+ + D +N ++ + + I+ L
Sbjct: 252 SQLLNKFLKHWMRG---SNPRMKYLQAKVDIKNQKYKSQILEGIETL 295
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 455 SCRGTARSCTGWCWAG-CRTSP---TSCGRACCSCSTTLRSL*WELRSVSGST 309
SC RSC GW G C+ +P +C +C SC T ELR + G+T
Sbjct: 611 SCVDYHRSCAGWARVGECQKNPWMAENCRSSCNSCYTQS-----ELRRMCGTT 658
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = -1
Query: 513 LVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQSVLQLLNNAKILIMG 334
L L + +N+ D AL F SR + H L L +TD +++ + + L +
Sbjct: 125 LKELSLKGCENVHDSALRTFTSRCPNLEH-LSLYRCKRVTDASCENLGRYCHKLNYLNLE 183
Query: 333 TQERLGINIHVDQLMDGIANSCPNLERLELRW 238
+ D+ M I + CPNL L + W
Sbjct: 184 NCSSI-----TDRAMKYIGDGCPNLSYLNISW 210
Score = 29.1 bits (62), Expect = 3.5
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDY-VMQVEWEKSSVQELDLTA-TDLSTECLIDMLTRIPNLRFLSAGQ 574
L L M+ C+ SD ++ + +++ L+L+ T L I + L L
Sbjct: 281 LEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMED 340
Query: 573 INGFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHIT 394
+ +D + + TA L L + + ++DE++ S+H L+ L L P +T
Sbjct: 341 CSLISDHTINSLANNCTA--LRELSLSHCELITDESIQNLASKHRETLNVLELDNCPQLT 398
Query: 393 DQLWQSVLQLLNNAKIL 343
D S L L + K L
Sbjct: 399 D----STLSHLRHCKAL 411
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/92 (26%), Positives = 39/92 (42%)
Frame = -1
Query: 513 LVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHITDQLWQSVLQLLNNAKILIMG 334
L L + +N+ D AL F SR + H L L +TD +++ + + L +
Sbjct: 125 LKELSLKGCENVHDSALRTFTSRCPNLEH-LSLYRCKRVTDASCENLGRYCHKLNYLNLE 183
Query: 333 TQERLGINIHVDQLMDGIANSCPNLERLELRW 238
+ D+ M I + CPNL L + W
Sbjct: 184 NCSSI-----TDRAMKYIGDGCPNLSYLNISW 210
Score = 29.1 bits (62), Expect = 3.5
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Frame = -1
Query: 747 LTCLLMNGCSLRSDY-VMQVEWEKSSVQELDLTA-TDLSTECLIDMLTRIPNLRFLSAGQ 574
L L M+ C+ SD ++ + +++ L+L+ T L I + L L
Sbjct: 281 LEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQLERLDMED 340
Query: 573 INGFNDSVLKAWVEAGTARNLVALDVDSSDNLSDEALHRFLSRHGSQLHGLVLGGMPHIT 394
+ +D + + TA L L + + ++DE++ S+H L+ L L P +T
Sbjct: 341 CSLISDHTINSLANNCTA--LRELSLSHCELITDESIQNLASKHRETLNVLELDNCPQLT 398
Query: 393 DQLWQSVLQLLNNAKIL 343
D S L L + K L
Sbjct: 399 D----STLSHLRHCKAL 411
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 474 PTGCPTSPRPAPPGS*QSQLPP 539
P GCP P P PPG + PP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 474 PTGCPTSPRPAPPGS*QSQLPP 539
P GCP P P PPG + PP
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 474 PTGCPTSPRPAPPGS*QSQLPP 539
P GCP P P PPG + PP
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPP 369
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = -2
Query: 446 GTARSCTGWCWAGCRTSPTS---CGRACCSCSTTLRSL 342
G C G C GC +P CG C C RSL
Sbjct: 31 GGCGGCGGGCGGGCGCAPPPPPCCGGGCGGCGRKKRSL 68
>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical
protein ZK896.8 protein.
Length = 1112
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 621 DMLTRIPN--LRFLSAGQINGFNDSVLKAWVEAGTARNLVALDVDSSDN 481
+ML R+ + + +NGF+DSV+ ++VE + D+D++ N
Sbjct: 299 EMLQRVKDHYANAIIVDDVNGFDDSVVSSFVEKIEKHGMQKSDIDTNIN 347
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 425 GWCWAGCRTSPTSCGRACCSCSTTLRS 345
G+C+ RTS T+C CS +T S
Sbjct: 27 GYCYPANRTSATTCSECTCSDESTQTS 53
>U41033-6|AAA82378.1| 859|Caenorhabditis elegans Hypothetical
protein K09E3.7 protein.
Length = 859
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 715 SIRLRNASGVGE-ILRSGIG-FDRHRLVDRVPDRHAHPDTEPALSERR 578
S L N G+ E + + I FDR L+ RV R H EP E R
Sbjct: 15 SYHLLNMKGLAEKVKKIDISIFDRRSLLKRVKHRSCHKRAEPESEENR 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,683,409
Number of Sequences: 27780
Number of extensions: 278553
Number of successful extensions: 1036
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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