Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a04f
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   4.9  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    23   6.5  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.6  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 594 FRKVVELHRSTKIKKHVCQIRTFSCQLVED 505
           FRK + LH +  +++ +   RTF C  + D
Sbjct: 10  FRKGLRLHDNPALREGLRGARTFRCVFIID 39


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -3

Query: 284 KMFNKTLSGSFSMVVICLLRKLDDNSSLVIAIVAVSTFRM 165
           K+F + +S    ++++ + RK+    +L I    V TF M
Sbjct: 210 KVFEQKVSTMIKIILVLMGRKISSKFTLKITDADVETFFM 249


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 281 MFNKTLSGSFSMVVICLLRKLDDNSSLVIAI 189
           +FN  +S  F+  ++ LLR+  D SS  I +
Sbjct: 603 LFNNMVSMGFNPGLVGLLRRFGDQSSSRILV 633


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,450
Number of Sequences: 2352
Number of extensions: 14611
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)