Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a04f
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 140 6e-34
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 140 1e-33
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 139 1e-33
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 53 2e-07
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical pr... 38 0.005
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 35 0.059
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 33 0.14
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 31 0.96
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 30 1.7
U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan hyd... 29 2.2
U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan hyd... 29 2.2
AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan hy... 29 2.2
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 6.8
AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical ... 28 6.8
AC199167-1|ABO33247.1| 233|Caenorhabditis elegans Hypothetical ... 28 6.8
U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila... 27 9.0
AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 140 bits (340), Expect = 6e-34
Identities = 71/148 (47%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Frame = +1
Query: 226 RRRQMTTIEKLPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLWTHVSLRPEISGL 405
R R+ TIEKLPDKVL +IF YL+ ++I ++ VC+RWR+ + + LW VS RP G+
Sbjct: 25 RTRRTKTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGGI 84
Query: 406 HVXXXXXXXXXXXX--RFGPSLRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQL 579
V RF LR +EL +LIT VL+ELA K P L ++ LDFSTAMQL
Sbjct: 85 QVNPQCIDHFIQLIGTRFS-ELRIVELATDLITPNVLYELANKAPKLQYLTLDFSTAMQL 143
Query: 580 HDFSEMQAFPTKLRYLCICLSEVIXMEG 663
HDF+++Q+FP++L+ L +CLSE I +EG
Sbjct: 144 HDFTDLQSFPSRLKSLTLCLSENIFLEG 171
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 140 bits (338), Expect = 1e-33
Identities = 71/155 (45%), Positives = 97/155 (62%), Gaps = 2/155 (1%)
Frame = +1
Query: 205 DELSSSFRRRQMTTIEKLPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLWTHVSL 384
D + R TIEKLPDKVL +IF YL+ ++I ++ VC+RWR+ + + LW VS
Sbjct: 35 DSNQQYYTERNQYTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSF 94
Query: 385 RPEISGLHVXXXXXXXXXXXX--RFGPSLRYIELPIELITHTVLHELAAKCPNLTHMLLD 558
RP G+ V RF LR +EL +LIT VL+ELA K P L ++ LD
Sbjct: 95 RPNYGGIQVNPQCIDHFIQLIGTRFS-ELRIVELATDLITPNVLYELANKAPKLQYLTLD 153
Query: 559 FSTAMQLHDFSEMQAFPTKLRYLCICLSEVIXMEG 663
FSTAMQLHDF+++Q+FP++L+ L +CLSE I +EG
Sbjct: 154 FSTAMQLHDFTDLQSFPSRLKSLTLCLSENIFLEG 188
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 139 bits (337), Expect = 1e-33
Identities = 70/145 (48%), Positives = 96/145 (66%), Gaps = 2/145 (1%)
Frame = +1
Query: 235 QMTTIEKLPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLWTHVSLRPEISGLHVX 414
+M TIEKLPDKVL +IF YL+ ++I ++ VC+RWR+ + + LW VS RP G+ V
Sbjct: 62 RMPTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFVSFRPNYGGIQVN 121
Query: 415 XXXXXXXXXXX--RFGPSLRYIELPIELITHTVLHELAAKCPNLTHMLLDFSTAMQLHDF 588
RF LR +EL +LIT VL+ELA K P L ++ LDFSTAMQLHDF
Sbjct: 122 PQCIDHFIQLIGTRFS-ELRIVELATDLITPNVLYELANKAPKLQYLTLDFSTAMQLHDF 180
Query: 589 SEMQAFPTKLRYLCICLSEVIXMEG 663
+++Q+FP++L+ L +CLSE I +EG
Sbjct: 181 TDLQSFPSRLKSLTLCLSENIFLEG 205
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +1
Query: 256 LPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLWTHVSLRPEISGLHVXXXXXXXX 435
LP +VLL +FS+L + +CR A VCR W ++A D W V ++
Sbjct: 60 LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRV----DLFTFQRDVKTAVVE 115
Query: 436 XXXXRFGPSLRYIELP-IELITHTVLHELAAKCPNLTHMLL 555
R G L+ + L E + + L ++CPNL H+ L
Sbjct: 116 NLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSL 156
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Frame = +1
Query: 256 LPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLWTHVSLRPEISGLHVXXXXXXXX 435
LP +VLL +FS+L + +CR A VCR W ++A D W V ++
Sbjct: 60 LPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRV----DLFTFQRDVKTAVVE 115
Query: 436 XXXXRFGPSLRYIELP-IELITHTVLHELAAKCPNLTHMLL 555
R G L+ + L E + + L ++CPNL H+ L
Sbjct: 116 NLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSL 156
>Z48809-2|CAA88747.1| 406|Caenorhabditis elegans Hypothetical
protein T01E8.4 protein.
Length = 406
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 235 QMTTIEKLPDKVLLNIFSYLTHRE-ICRMATVCRRWRMVAYDTKLWT 372
Q T + LP ++L ++F+YL R+ I + VCRR+ + D K W+
Sbjct: 5 QPTELISLPSELLCHLFTYLPQRQLITEIPLVCRRFNTILNDDKFWS 51
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 34.7 bits (76), Expect = 0.059
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 247 IEKLPDKVLLNIFSYLTHREICRMATVCRRW 339
I +PD +L IF + +C+M VCRRW
Sbjct: 10 IPNMPDLILRKIFDQYDYPVLCKMERVCRRW 40
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 145 SIMDSWGI-LNVDTATIAITRDELSSSFRRRQMTTIEKLPDKVLLNIFSYLTHREICRMA 321
SI D G L T +E + Q I +LP+++LL +FS+L + + +
Sbjct: 127 SIEDESGTNLEAKMETTECEPEEEEAVEEEDQQDHINRLPEELLLKVFSFLPDKSLLACS 186
Query: 322 TVCRRWRMVAYDTKLW 369
+V R+ ++ ++W
Sbjct: 187 SVSYRFNQISNSHEVW 202
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 30.7 bits (66), Expect = 0.96
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 229 RRQMTTIEKLPDKVLLNIFSYLTHREICRMATVCRRWR--MVAYDTKLWTHV 378
RR + +LP KVL IF YL +++ C W + D+ +W ++
Sbjct: 76 RRPEVSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYL 127
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 520 AAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYLCICLSEV 648
+AKCP+ T + LDFST H PT+L Y C+ + +
Sbjct: 108 SAKCPSGT-VCLDFSTQRCCHPMPGTCPTPTQLGYKCMVYTPI 149
>U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform b protein.
Length = 429
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -2
Query: 657 HXDDLGQTDAQVAELRREGLHFRKVVELHRSTKIKKHVCQIRTFSCQLVEDCVGY 493
H + + +T+ +E + G+ +RK+ ELH KKH C+ + +L+E GY
Sbjct: 134 HGEPIPRTEYTSSERKTWGIIYRKLRELH-----KKHACKQFLDNFELLERHCGY 183
>U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform a protein.
Length = 532
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -2
Query: 657 HXDDLGQTDAQVAELRREGLHFRKVVELHRSTKIKKHVCQIRTFSCQLVEDCVGY 493
H + + +T+ +E + G+ +RK+ ELH KKH C+ + +L+E GY
Sbjct: 237 HGEPIPRTEYTSSERKTWGIIYRKLRELH-----KKHACKQFLDNFELLERHCGY 286
>AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan
hydroxylase protein.
Length = 532
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -2
Query: 657 HXDDLGQTDAQVAELRREGLHFRKVVELHRSTKIKKHVCQIRTFSCQLVEDCVGY 493
H + + +T+ +E + G+ +RK+ ELH KKH C+ + +L+E GY
Sbjct: 237 HGEPIPRTEYTSSERKTWGIIYRKLRELH-----KKHACKQFLDNFELLERHCGY 286
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 572 CNSTTFRKCKPSRRSSATCASVCPRS 649
CNS C+ + SS+ CAS C RS
Sbjct: 101 CNSQCSNVCQQKQYSSSQCASSCNRS 126
>Z81549-6|CAB04475.1| 523|Caenorhabditis elegans Hypothetical
protein F55C9.7 protein.
Length = 523
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +1
Query: 241 TTIEKLPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLWTHVS 381
T +E LP KVL N LT REI + + + A L +S
Sbjct: 253 TPVEDLPAKVLYNAIRCLTPREIISFSLISKFTLQTAESLNLQDRIS 299
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +1
Query: 256 LPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLW 369
LP ++ + I LT ++ ++A V + W++++ K+W
Sbjct: 125 LPVELGMKILHNLTGYDLLKVAQVSKNWKLISEIDKIW 162
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +1
Query: 256 LPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLW 369
LP ++ + I LT ++ ++A V + W++++ K+W
Sbjct: 127 LPVELGMKILHNLTGYDLLKVAQVSKNWKLISEIDKIW 164
>Z54216-9|CAN86906.1| 155|Caenorhabditis elegans Hypothetical
protein T24H10.7d protein.
Length = 155
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 660 LHXDDLGQT-DAQVAELRREGLHFRKVVELH 571
LH GQ DA++ EL R HFR+ VE H
Sbjct: 113 LHEKHRGQRLDAELLELNRALEHFRRTVEHH 143
>Z54216-8|CAA90948.1| 101|Caenorhabditis elegans Hypothetical
protein T24H10.7c protein.
Length = 101
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 660 LHXDDLGQT-DAQVAELRREGLHFRKVVELH 571
LH GQ DA++ EL R HFR+ VE H
Sbjct: 59 LHEKHRGQRLDAELLELNRALEHFRRTVEHH 89
>Z54216-7|CAI46586.1| 299|Caenorhabditis elegans Hypothetical
protein T24H10.7b protein.
Length = 299
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 660 LHXDDLGQT-DAQVAELRREGLHFRKVVELH 571
LH GQ DA++ EL R HFR+ VE H
Sbjct: 257 LHEKHRGQRLDAELLELNRALEHFRRTVEHH 287
>Z54216-6|CAB76416.2| 319|Caenorhabditis elegans Hypothetical
protein T24H10.7a protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 660 LHXDDLGQT-DAQVAELRREGLHFRKVVELH 571
LH GQ DA++ EL R HFR+ VE H
Sbjct: 277 LHEKHRGQRLDAELLELNRALEHFRRTVEHH 307
>U23514-3|AAC46542.2| 421|Caenorhabditis elegans Hypothetical
protein F48E8.7a protein.
Length = 421
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 256 LPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLW 369
+PD++ IFS L +++ VC R+ + + ++ W
Sbjct: 93 IPDEITEQIFSNLKKKDLLSAMLVCHRFYGIGHKSRNW 130
>U23514-2|AAM48532.1| 418|Caenorhabditis elegans Hypothetical
protein F48E8.7b protein.
Length = 418
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 256 LPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLW 369
+PD++ IFS L +++ VC R+ + + ++ W
Sbjct: 90 IPDEITEQIFSNLKKKDLLSAMLVCHRFYGIGHKSRNW 127
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +1
Query: 256 LPDKVLLNIFSYLTHREICRMATVCRRWRMVAYDTKLW 369
LP ++ + I LT ++ ++A V + W++++ K+W
Sbjct: 127 LPVELGMKILHNLTGYDLLKVAQVSKNWKLISEIDKIW 164
>AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical
protein cTel55X.1a protein.
Length = 222
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 463 LRYIELPIELITHTVLHELAAKCPNLTHMLLDF 561
L I+L ++L+ HT+ LA PN H++ D+
Sbjct: 43 LTIIDLYMQLLYHTIGFILAVVSPNKRHIIFDY 75
>AC199167-1|ABO33247.1| 233|Caenorhabditis elegans Hypothetical
protein cTel55X.1b protein.
Length = 233
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 463 LRYIELPIELITHTVLHELAAKCPNLTHMLLDF 561
L I+L ++L+ HT+ LA PN H++ D+
Sbjct: 43 LTIIDLYMQLLYHTIGFILAVVSPNKRHIIFDY 75
>U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila
roughdeal) homologprotein 1 protein.
Length = 2049
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 395 ISGLKLTCVHNFVSYATILHRLQTVAIRHISRCVRYEKM 279
I K++ V YAT+L R +VA RH R +R E++
Sbjct: 1436 IRNSKISVGEYMVRYATLLIRKASVAGRHTDREIRKEEI 1474
>AF047653-2|AAC04459.1| 388|Caenorhabditis elegans Hypothetical
protein W02F12.3 protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 181 TATIAITRDELSSSFRRRQMTTIEKLPDKVLLNIF 285
TA IAI RD S+S +RRQM + NIF
Sbjct: 5 TALIAIIRDWYSASVQRRQMIENSHIIPSSEFNIF 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,422,232
Number of Sequences: 27780
Number of extensions: 356454
Number of successful extensions: 1005
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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