Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a03r
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11) 50 3e-06
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09) 46 4e-05
SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05) 45 6e-05
SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 44 1e-04
SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 44 2e-04
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 43 2e-04
SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04) 43 2e-04
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 42 4e-04
SB_21796| Best HMM Match : COLFI (HMM E-Value=0) 42 4e-04
SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022) 42 5e-04
SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 42 5e-04
SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24) 42 5e-04
SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 42 5e-04
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 42 7e-04
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07) 41 0.001
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 41 0.001
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 41 0.001
SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 40 0.002
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29) 40 0.002
SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13) 40 0.002
SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013) 40 0.002
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 40 0.002
SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12) 40 0.002
SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09) 40 0.003
SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12) 38 0.009
SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10) 38 0.012
SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 37 0.015
SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05) 37 0.020
SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18) 37 0.020
SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07) 36 0.027
SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07) 36 0.027
SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45) 36 0.027
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048) 36 0.047
SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.062
SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12) 35 0.062
SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11) 35 0.062
SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01) 35 0.082
SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04) 35 0.082
SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32) 34 0.14
SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035) 34 0.14
SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029) 34 0.14
SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22) 33 0.19
SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073) 33 0.33
SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06) 32 0.44
SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024) 32 0.58
SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003) 31 0.76
SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015) 31 0.76
SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 30 2.3
SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031) 30 2.3
SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14) 30 2.3
SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031) 30 2.3
SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09) 30 2.3
SB_31554| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09) 30 2.3
SB_6541| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_39689| Best HMM Match : S-antigen (HMM E-Value=0.021) 29 3.1
SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_57200| Best HMM Match : Plasmodium_HRP (HMM E-Value=4.7) 28 9.4
SB_54575| Best HMM Match : S10_plectin (HMM E-Value=0) 28 9.4
SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82) 28 9.4
SB_45446| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_44202| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_17470| Best HMM Match : HC2 (HMM E-Value=2.8) 28 9.4
SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11) 28 9.4
SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031) 28 9.4
>SB_13124| Best HMM Match : Collagen (HMM E-Value=2.3e-11)
Length = 476
Score = 49.6 bits (113), Expect = 3e-06
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G PGP G GAKGD+G G++G G+ G EGP+G GP
Sbjct: 126 GPPGPQGPTGAKGDQGPEGIQGPQGIRGPEGPQGPQGP 163
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G GP G NG +G +G++G +G G PGT G +G G
Sbjct: 380 GSKGPQGPNGTRGLQGEKGPQGDQGPKGEPGTPGAKGESG 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Frame = -2
Query: 353 GRPGPSG--------SNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PGP G + +G KG +G G GL G +GP+G GP
Sbjct: 360 GPPGPPGRAPPDLKVTREIRGSKGPQGPNGTRGLQGEKGPQGDQGP 405
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 49.2 bits (112), Expect = 4e-06
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
+ G PGP G+ GAKGD+G G+ G+ G+PG GP G GP
Sbjct: 1275 ERGAPGPRGNTGAKGDRGIPGLNGLSGIPGERGPVGPAGP 1314
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G+PGP G GA G+KG RG+ G PG +G RG GP+
Sbjct: 582 GKPGPVGDAGAPGEKGARGLSIQGTPGMDGKRGPRGPI 619
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/43 (53%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGPV 240
TG PGP G G G KG+RG +G+ GLPG GP+G GPV
Sbjct: 964 TGPPGPPGLPGRPGLKGERGRDGLDGQNGLPGIPGPKGDTGPV 1006
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PGPSG G G G G+ G GLPGT G +G PGP
Sbjct: 697 GLPGPSGEPGKPGPAGRAGLAGQDGLPGTPGTKGEPGP 734
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PGP G G +G KGD GV GLPG GP+G G
Sbjct: 1193 GPPGPDGPAGVQGVKGDPGVGQPGLPGPAGPKGERG 1228
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PGP G G G +GD G G+ G G GP+G PGP
Sbjct: 273 GEPGPEGPQGPPGVRGDTGFPGLNGTQGLPGPKGPPGP 310
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
+ GRPG G+ G +G KG+RG G GL G G G PGP+
Sbjct: 379 EEGRPGLPGAQGIEGPKGERGEPGNQGLKGDRGVDGNPGPI 419
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
D G+ GP G G G G G GV G PG +GP G PGPV
Sbjct: 547 DPGKMGPQGFKGDPGPPGPPGEVGVPGAPGMKGPIGKPGPV 587
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/37 (54%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G G G +G +GDKGDRG+ G G PG EG RG+ G
Sbjct: 1409 GEKGSPGLSGLRGDKGDRGLPGPSGPPGEEGARGSDG 1445
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
+ G GP G G +GD G G+ G GLPG +GP G GP
Sbjct: 274 EPGPEGPQGPPGVRGDTGFPGLNGTQGLPGPKGPPGPTGP 313
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 10/48 (20%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----------VGLPGTEGPRGAPGPV 240
G PGP G G +G KGD G G +G PGT+G +G PGP+
Sbjct: 846 GPPGPPGVTGEQGVKGDTGPSGEPGPAGPPGPLGTPGTQGAKGEPGPL 893
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGP 243
G+PG G G KG++G G G+ G+ G EGP G PGP
Sbjct: 1213 GQPGLPGPAGPKGERGVNGFPGIKGIQGVQGLEGPPGPPGP 1253
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 13/49 (26%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-------------GLPGTEGPRGAPG 246
G GP G +G KGD G RG +G+ GLPG +GPRG PG
Sbjct: 900 GLAGPPGRDGMKGDPGPRGRDGLPGEPGARGDIGSRGLPGEDGPRGPPG 948
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G GP G G G G +G++GV GL G GP G PG +
Sbjct: 1219 GPAGPKGERGVNGFPGIKGIQGVQGLEGPPGPPGPPGQI 1257
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
GR G G G KG+ G G++G G +GP G PGP
Sbjct: 814 GRDGIDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGP 850
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG G NG+ G KG+ G G G+ G +GP G GP
Sbjct: 1163 GEPGRDGQNGSPGRKGEPGPAGKNGINGLDGPPGPDGP 1200
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Frame = -2
Query: 353 GRPGPSGSNGA----KGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G PGP+G G KG+KG +G +G +G PG G RG GP
Sbjct: 730 GEPGPTGEKGEVFRIKGEKGAKGQQGGIGNPGPPGLRGDVGP 771
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-------VGLPGTEGPRGAPG 246
G PG G G+ G+KGD G+ G GLPG +G +G PG
Sbjct: 1124 GLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQGLKGEPG 1166
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G G +G G +G+ G++G++G G PGT G G PGP
Sbjct: 1031 GEKGYAGLPGPRGETGEKGLDGPSGPPGTPGQPGPPGP 1068
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PG G +G G+KG G+ GL G +G RG PGP
Sbjct: 1397 GEPGLPGRDGPAGEKGSPGLS--GLRGDKGDRGLPGP 1431
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG G G +G+KG+ G G+ G G EGP+G G
Sbjct: 363 GAPGEKGEPGKQGEKGEEGRPGLPGAQGIEGPKGERG 399
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
PGP+G G+ G G+ G G GLPG G G PGP
Sbjct: 675 PGPAGEPGSPGLPGEDGAIGSRGLPGPSGEPGKPGP 710
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGP---RGAPGP 243
D G GP+G G KG++G G G +G PG GP +G PGP
Sbjct: 520 DRGPQGPTGFPGTKGNQGIAGPPGQIGDPGKMGPQGFKGDPGP 562
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG G+ G G G G +G+ G PG +G +G PGP
Sbjct: 879 GTPGTQGAKGEPGPLGTPGRQGLAGPPGRDGMKGDPGP 916
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKG--DRGVEGV-GLPGTEGPRGAPG 246
G PGP+G G KG+ G +G +G+ G GT+G RG PG
Sbjct: 306 GPPGPTGPEGPKGNMGISFKGPQGMKGDKGTKGARGPPG 344
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGD------RGVEGVGLPGTEGPRGAPG 246
G PG G +G +G KG+ +G GVG+ G GP G PG
Sbjct: 811 GAPGRDGIDGVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPG 852
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRG--VEGVGLPGTEGPRGAPG 246
G PG G GAKG KGD+G V G PG G GA G
Sbjct: 1252 GPPGQIGFTGAKGSKGDQGELVIERGAPGPRGNTGAKG 1289
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-------GLPGTEGPRGAPG 246
G PG G +G G KG+ G+ G+ GLPG +GP G G
Sbjct: 1370 GNPGAPGVDGPTGPKGESGIAGLDGPKGEPGLPGRDGPAGEKG 1412
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PGP G G G G G++G +G PG G GAPG
Sbjct: 558 GDPGPPGPPGEVGVPGAPGMKGPIGKPGPVGDAGAPG 594
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
+G PGP+G G G G +G +G +G PG +G G PG
Sbjct: 866 SGEPGPAGPPGPLGTPGTQGAKGEPGPLGTPGRQGLAGPPG 906
Score = 35.5 bits (78), Expect = 0.047
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG G G G +G +G +G + G GP G PG
Sbjct: 936 GLPGEDGPRGPPGIQGMKGAKGDAITGPTGPPGPPG 971
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G G KG G G G PG GP G GP
Sbjct: 1037 GLPGPRGETGEKGLDGPSGPPGT--PGQPGPPGPRGP 1071
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 7/44 (15%)
Frame = -2
Query: 353 GRPGPSGSNGAKGD------KGDRGVEG-VGLPGTEGPRGAPGP 243
G+PGP G G +G KG++G +G +G PGT P PGP
Sbjct: 1061 GQPGPPGPRGPEGRQGFPGFKGNQGEKGRMGPPGTSEPGNVPGP 1104
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
GP G+ G KG+ G +G +G G PG G +G GP
Sbjct: 360 GPPGAPGEKGEPGKQGEKGEEGRPGLPGAQGIEGP 394
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G G+ G KG+ GV G PG GP G G
Sbjct: 820 GVRGPKGEPGSDGMKGEAGVGIDGPPGPPGPPGVTG 855
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G+ GP G +G G+KG G+ G G G +GP G PG
Sbjct: 1019 GKEGPPGEDGNIGEKGYAGLPGPRGETGEKGLDGPSGPPG 1058
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
D G G G +G +G G +G++G GP G PGP
Sbjct: 931 DIGSRGLPGEDGPRGPPGIQGMKGAKGDAITGPTGPPGP 969
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
+ G GP G G KG KGD G PG G G PG
Sbjct: 940 EDGPRGPPGIQGMKGAKGDAITGPTGPPGPPGLPGRPG 977
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = -2
Query: 353 GRPGPSGSNGAKG------DKGDRGVEGV-GLPGTEGPRGAPGP 243
G PGP+G NG G G GV+GV G PG G G PGP
Sbjct: 1178 GEPGPAGKNGINGLDGPPGPDGPAGVQGVKGDPGV-GQPGLPGP 1220
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVE---GVGLPGTEGPRGAPGP 243
G GP G G +G KG+ G+ G+ G +G +GA GP
Sbjct: 303 GPKGPPGPTGPEGPKGNMGISFKGPQGMKGDKGTKGARGP 342
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G G +G KG +G G G GP G PG
Sbjct: 939 GEDGPRGPPGIQGMKGAKGDAITGPTGPPGPPGLPG 974
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDK-----GDRGVEG-VGLPGTEGPRGAPGP 243
G GP+G G GD GD+G++G G PG EG G GP
Sbjct: 620 GEKGPTGFPGPPGDSDYGPPGDKGLKGNTGPPGDEGVPGPIGP 662
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -2
Query: 359 DTGRPGPSG---SNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
D G PGPSG GA+G G G+ PG++G RG GP
Sbjct: 1425 DRGLPGPSGPPGEEGARGSDGFPGI-----PGSKGERGLIGP 1461
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
D G PG G G G G +G++G PG +G G+PG
Sbjct: 1140 DAGIPGQRGLTGNPGLPGAQGLKGE--PGRDGQNGSPG 1175
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
TG PG G+ G KG+ G G G G G GP G G
Sbjct: 1150 TGNPGLPGAQGLKGEPGRDGQNGSPGRKGEPGPAGKNG 1187
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG G G G G RG+ G G PG GP G G
Sbjct: 679 GEPGSPGLPGEDGAIGSRGLPGPSGEPGKPGPAGRAG 715
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = -2
Query: 359 DTGRPGPSGSNG----AKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+ G GP G G KG G RG +G G PG GP G PG
Sbjct: 1455 ERGLIGPKGIKGERGYGKGIPGPRGEKGDSGFPGINGPPGPPG 1497
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
DTG GP G G G G G G G G +G G PGP
Sbjct: 1002 DTGPVGPPGRPGLPGPVGKEGPPGEDGNIGEKGYAGLPGP 1041
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G GP G G G G G G PG +G +G GP
Sbjct: 614 GPRGPIGEKGPTGFPGPPGDSDYGPPGDKGLKGNTGP 650
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTE---GPRGAPGP 243
D G PG G G G GD GV G +G G + P+ PGP
Sbjct: 635 DYGPPGDKGLKGNTGPPGDEGVPGPIGPKGDKCEACPKPPPGP 677
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G PGP G G G G++G GV PG G G +
Sbjct: 758 GNPGPPGLRGDVGPPGEQGPTGV--PGESWTSGGVGQI 793
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG G G +G G++G G P + G PG
Sbjct: 605 GTPGMDGKRGPRGPIGEKGPTGFPGPPGDSDYGPPG 640
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGD-RGVEG-VGLPGTEGPRGAPGP 243
G PG G G G+KG+ ++G G G +G G PGP
Sbjct: 724 GTPGTKGEPGPTGEKGEVFRIKGEKGAKGQQGGIGNPGP 762
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -2
Query: 335 GSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G G +G G++G GLPG G G PGP
Sbjct: 1539 GFPGIEGPLGEKGA--TGLPGLTGSIGVPGP 1567
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPR 258
G PG G GA+G G +G G G PG G R
Sbjct: 1494 GPPGQRGYEGARGPPGAKGQAGEDGRPGVPGRR 1526
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 9/47 (19%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG---------VGLPGTEGPRGAPG 246
D G PG G G G+ G G G PGT+G GAPG
Sbjct: 768 DVGPPGEQGPTGVPGESWTSGGVGQIKQGPPGDPGNPGTDGLPGAPG 814
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 302 RGVEGVGLPGTEGPRGAPGP 243
+G+ G+G PG +G RG GP
Sbjct: 507 QGLPGIGPPGPDGDRGPQGP 526
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/44 (54%), Positives = 28/44 (63%), Gaps = 7/44 (15%)
Frame = -2
Query: 350 RPGPSGSNGA------KGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
RPGP G NGA KGD GDRG +G GLPG +G +G GP+
Sbjct: 510 RPGPPGENGAFGLPGRKGDSGDRGPDGNPGLPGQKGDKGLLGPI 553
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
GP G NG +G KG+ G +G G PG G G PGP
Sbjct: 861 GPPGDNGPRGKKGEAGSDGRPGFPGESGANGLPGP 895
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
D G PGP G+ G +G G G GLPG G G PGP
Sbjct: 19 DAGPPGPEGNMGPRGQPGPEG--SPGLPGERGTGGVPGP 55
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/36 (52%), Positives = 20/36 (55%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PGP G NG GD G G +G P GPRG PG
Sbjct: 900 GSPGPRGPNGEPGDPGMDGDKGPPGPVDAGPRGPPG 935
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G+PGP GS G G++G GV PG +G +GAPG +
Sbjct: 33 GQPGPEGSPGLPGERGTGGV-----PGPKGKQGAPGTI 65
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G+PG G GA G KG RG+ G PG GP GA GP
Sbjct: 459 GKPGLIGEQGAIGFKGLRGM--TGNPGPNGPAGATGP 493
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
D G GP G GA G G G+E GL G GP G PG
Sbjct: 307 DLGPDGPPGPKGAPGAPGFSGIE--GLKGQSGPLGDPG 342
Score = 35.9 bits (79), Expect = 0.036
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTE-----GPRGAPGP 243
G PG G G++GD GD G G GLPG + GP G GP
Sbjct: 60 GAPGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGP 102
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTE--GPRGAPGP 243
G PG G NGA G KGD G G G PG + GP+G GP
Sbjct: 110 GAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGP 152
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAP 249
PGP G +G G+KG GV+G PG +GP+ P
Sbjct: 144 PGPKGMDGPPGEKGLPGVQGD--PGIKGPKAEP 174
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = -2
Query: 353 GRPGPSGSN------GAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
G PG SG+N G G G RG G G PG +G +G PGPV
Sbjct: 882 GFPGESGANGLPGPPGLAGSPGPRGPNGEPGDPGMDGDKGPPGPV 926
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G G G KG+ G+ G PG G G PG
Sbjct: 489 GATGPPGIPGFPGQKGEPGISRPGPPGENGAFGLPG 524
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
D G GP G G G G G++G+ G PG +G G PG
Sbjct: 927 DAGPRGPPGEPGPPGPFGAAGLDGMPGKPGAKGESGQPG 965
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G G G G KG G G+ +PG +G G PG
Sbjct: 119 GAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPG 154
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEG 264
D+G GP G+ G G KGD+G+ G +G PG G
Sbjct: 528 DSGDRGPDGNPGLPGQKGDKGLLGPIGPPGRGG 560
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG G +G KG +G G +GV PG GP G PG
Sbjct: 1420 GPPGKPGLSGNKGKEGLPGDDGV--PGQPGPPGPPG 1453
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG G G G G+RG G+ G PG +G G G
Sbjct: 241 GEPGADGVRGPDGSTGERGETGLDGAPGKKGEDGTKG 277
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTE---GPRGAPG 246
GR G SG G GD G +G G GLPG G +GA G
Sbjct: 433 GRDGQSGPKGLPGDDGLKGPPGDGLPGKPGLIGEQGAIG 471
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDK--GDRGVEGV----GLPGTEGPRGAPGP 243
DTG GP G G+ G G +G++G GLPG +G G GP
Sbjct: 126 DTGPLGPKGQPGSPGIDIPGPKGMDGPPGEKGLPGVQGDPGIKGP 170
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G +G G G KG G + GLPG G G PG
Sbjct: 69 GSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPG 104
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKG--DRGVEG-VGLPGTEGPRGAPG 246
G PG G +G KG G D G G G PG GP GA G
Sbjct: 909 GEPGDPGMDGDKGPPGPVDAGPRGPPGEPGPPGPFGAAG 947
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
GP G G G+KG G LPG +G G PGP
Sbjct: 1420 GPPGKPGLSGNKGKEG-----LPGDDGVPGQPGP 1448
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G G G KG KGD G G PG G G PG
Sbjct: 559 GGVGSQGFQGQKGFKGDPGDAIPGNPGDPGVMGFPG 594
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDK--GDRGVEG-VGLPGTEGPRGAPG 246
DTG GP G+ G G + G G G G PG++G GAPG
Sbjct: 73 DTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPG 113
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
D R P +G KG G+ G G +G GT+G +G P P
Sbjct: 367 DPPRFVPVPDHGEKGQSGEPGFPGEIGEAGTQGEKGNPPP 406
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
D G GP G G KG K G PG +G RG GP
Sbjct: 198 DQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGETGP 236
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G +G G KG G +G+ P +G G PG
Sbjct: 427 GPRGPDGRDGQSGPKGLPGDDGLKGPPGDGLPGKPG 462
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG G G G G G GVG G +G +G G
Sbjct: 539 GLPGQKGDKGLLGPIGPPGRGGVGSQGFQGQKGFKG 574
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTE 267
+TG G G G G KG++GV G G PG +
Sbjct: 260 ETGLDGAPGKKGEDGTKGEQGVPGAKGQPGLD 291
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRG 255
+ G G G+ G KG+ G +G +GV PG +G G
Sbjct: 257 ERGETGLDGAPGKKGEDGTKGEQGV--PGAKGQPG 289
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = -2
Query: 353 GRPGPSGSNGAKGD--KGDRGVEG-VGLPGTEGPRGAPGPV 240
G PG G G G+ +G+ G G GLPG G G PG +
Sbjct: 582 GNPGDPGVMGFPGEPQRGEPGDPGRPGLPGQTGADGPPGMI 622
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PG +G+ G +G G G G P PR PGP
Sbjct: 188 GEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGP 224
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG 288
G GP G+NG +G+ G G++G
Sbjct: 623 GPRGPDGNNGPQGEGGPNGIKG 644
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD----------RGVEGV-GLPGTEGPRGAPG 246
+ G PG G G +G+KG+ +G +G G G EGPRG G
Sbjct: 385 EPGFPGEIGEAGTQGEKGNPPPTPIIIKYKGPKGTSGAQGKEGPRGPDG 433
>SB_14035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 388
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
+TG GP G G G+KGD+GV+G+ G GT+GPRG G
Sbjct: 207 NTGIMGPKGPKGDTGNKGDQGVQGLRGYNGTQGPRGNTG 245
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
DTG GP G G G+KGD+GV+G+ G GT+G +G G
Sbjct: 255 DTGITGPKGPKGDTGNKGDQGVQGLRGYNGTQGAKGEAG 293
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G G +G G KGD G++G +GV GL G G +GA G
Sbjct: 254 GDTGITGPKGPKGDTGNKGDQGVQGLRGYNGTQGAKG 290
>SB_25456| Best HMM Match : Collagen (HMM E-Value=1.3e-09)
Length = 386
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPG 246
G GP NG +G KGD+GV+GV G+PG +GP+GA G
Sbjct: 315 GPIGPQRYNGTQGSKGDQGVQGVKGDQGVPGPQGPKGAQG 354
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VG---LPGTEGPRGAPG 246
G GP G NG++G KGD+GV+G +G GT+G +G G
Sbjct: 294 GPIGPRGYNGSQGPKGDQGVQGPIGPQRYNGTQGSKGDQG 333
>SB_21646| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGP 243
G PGP G G KGDKGD+G G G PG +G +G GP
Sbjct: 71 GSPGPMGPEGPKGDKGDKGDTGAPGIDGQPGPQGEKGETGP 111
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
DTG PG G G +G+KG+ G +G G G GP+G PGP
Sbjct: 90 DTGAPGIDGQPGPQGEKGETGPQGEQGPKGDTGPQGQPGP 129
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
G+PGP G G G +G++G +G G PG EGP+G GP
Sbjct: 98 GQPGPQGEKGETGPQGEQGPKGDTGPQGQPGPEGPQGPAGP 138
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG G G +G KGD G G VG PG GP G G
Sbjct: 47 GTPGKDGPEGPQGPKGDSGSPGAVGSPGPMGPEGPKG 83
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
D GR GP G G +GD G +G G G G +G G PG
Sbjct: 12 DNGRDGPIGPKGDQGDIGPQGPPGERGFSGKDGLNGTPG 50
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G NG G G +G +G +G G G RG G
Sbjct: 5 GVKGPQGDNGRDGPIGPKGDQGDIGPQGPPGERGFSG 41
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
GP G G +GD G G G G G GP+G PG
Sbjct: 2 GPPGVKGPQGDNGRDGPIGPKGDQGDIGPQGPPG 35
>SB_33549| Best HMM Match : Collagen (HMM E-Value=2e-05)
Length = 346
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G PGP G G +G KG G +G+ G+ G GPRG PGP+
Sbjct: 86 GIPGPRGLPGYRGPKGPPGYQGMPGIAGAPGPRGPPGPM 124
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPR--------GAPGP 243
G GP G G KG G +G+ GV G PG GPR G PGP
Sbjct: 45 GTEGPPGPQGTKGPPGSQGLSGVQGYPGAPGPRGRSPPGPPGIPGP 90
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G SG G G G RG G PG GPRG PG
Sbjct: 60 GSQGLSGVQGYPGAPGPRGRSPPGPPGIPGPRGLPG 95
>SB_19777| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
TG GP+G+ GAKG KG G++G G G +G +G PGP
Sbjct: 67 TGESGPTGALGAKGQKGRMGLKGDAGYDGVDGFKGLPGP 105
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PGP G G G G RG EG+ G+ G G G PGP
Sbjct: 101 GLPGPPGFQGDPGKPGIRGHEGLQGVSGKAGSIGDPGP 138
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 10/48 (20%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV----------GLPGTEGPRGAPG 246
D G GP G G G KG G +GV GLPG +GP G PG
Sbjct: 12 DRGPRGPPGEQGFSGVKGKEGRDGVKGERGSKGKSGLPGDKGPVGPPG 59
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G G GS G G GD+G G G PG +GP G GP
Sbjct: 35 GVKGERGSKGKSGLPGDKGPVGPPGHPGHKGPTGESGP 72
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G G G +G G GD G G G+PG +G +G PG
Sbjct: 119 GHEGLQGVSGKAGSIGDPGPNGASGMPGFDGTKGDPG 155
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G PGP+G++G G G +G PG EG G PG +
Sbjct: 134 GDPGPNGASGMPGFDGTKGD-----PGDEGNEGLPGDI 166
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR 258
G G G +G KGD GD G E GLPG PR
Sbjct: 140 GASGMPGFDGTKGDPGDEGNE--GLPGDIVPR 169
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEG 264
+G PG G+ G GD+G+ G+ G +P +G
Sbjct: 142 SGMPGFDGTKGDPGDEGNEGLPGDIVPRYKG 172
>SB_17317| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 44.8 bits (101), Expect = 8e-05
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
++G PGP+G GA GD G RG G +G+ G +GP G GP
Sbjct: 170 ESGPPGPAGPIGAVGDSGPRGERGELGIRGNKGPVGVEGP 209
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGV-EGVGLPGTEGPRGAPG 246
++G G SG G G KGD+GV GVGL G EG +GA G
Sbjct: 337 ESGAQGDSGDEGDGGAKGDKGVFGGVGLDGAEGEQGARG 375
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGPV 240
TG PG +GS+G+ G +G +G+ G G G +GP G PG V
Sbjct: 266 TGAPGAAGSDGSVGKQGRKGITGDRGAQGKTGKQGPTGTPGTV 308
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG +G G+ G G G+ G G+PGT G G PGP
Sbjct: 139 GPPGDAGMQGSDGANGQPGLPGRDGVPGTVGESGPPGP 176
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
+TG+ G G GAKG G+ G +G G+ G++G G PG
Sbjct: 116 ETGQQGMLGPAGAKGGLGEPGTDGPPGDAGMQGSDGANGQPG 157
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
D+G G G G +G GDRG G GLPG+ G GA G
Sbjct: 232 DSGDGGSDGKAGKEGKAGDRGAIGKTGNAGLPGSTGAPGAAG 273
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP GSNG G +G+ G + GLPG G +G G
Sbjct: 312 GVTGPDGSNGQPGRQGEPGKQ--GLPGESGAQGDSG 345
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G GP+G++G G G+RG+ G G G GP GA G
Sbjct: 91 GEGGPNGASGPAGVAGERGLPGGLGETGQQGMLGPAGAKG 130
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
D G G G+NG G G GV G VG G GP G G V
Sbjct: 143 DAGMQGSDGANGQPGLPGRDGVPGTVGESGPPGPAGPIGAV 183
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
TG+ GP+G+ G G +G G +G G PG +G G G
Sbjct: 296 TGKQGPTGTPGTVGLRGVTGPDGSNGQPGRQGEPGKQG 333
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLP-GTEGPRGAPGPV 240
G G G GA+G GD G G P G G RG GPV
Sbjct: 363 GLDGAEGEQGARGKSGDFGPIGPPGPLGPPGDRGMQGPV 401
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G PG G G G +GD G EG G G +G +G G V
Sbjct: 327 GEPGKQGLPGESGAQGDSGDEGDG--GAKGDKGVFGGV 362
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR 258
D G GP G G GD+G +G VGL GT G R
Sbjct: 379 DFGPIGPPGPLGPPGDRGMQG--PVGLRGTVGAR 410
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/38 (57%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
GRPG G +GA G G G EG VGL G GPRG GP
Sbjct: 129 GRPGRPGFDGAPGAPGSPGAEGKVGLTGQTGPRGPTGP 166
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
TG+PG GSNGA G G+ G +G PGT G +G PG
Sbjct: 494 TGKPGDRGSNGADGTPGEPGAQGTKRKPGTPGRQGMPG 531
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
G GP G +G +G KG G++G GLPG +G G PGP
Sbjct: 204 GNQGPQGPSGPQGSKGQAGIDGRPGEPGLPGDKGAMGGPGP 244
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGP 243
+GRPG +G+ G +G G +G EG G+PG GP G PGP
Sbjct: 626 SGRPGITGTLGQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGP 667
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
G GP G NG +GDKG+RG G G PG G G PGP
Sbjct: 852 GPAGPQGPNGPQGDKGNRGPRGEKGEQGPPGVAGTDGPPGP 892
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G PG +G NG G+ G+RG G G PGT+GP G PG
Sbjct: 417 GMPGVAGKNGNAGEPGERGPVGPQGPQGAPGTQGPPGLPG 456
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG GS G +G G G++G G PG++G G PGP
Sbjct: 537 GAPGAKGSRGERGRVGPPGIDGKDGAPGSDGLNGPPGP 574
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
+G PG +G+ GA G GDRG G+ GPRGAPGP
Sbjct: 254 SGAPGITGNPGATGINGDRGPN-----GSPGPRGAPGP 286
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G GPSGSNG G KG G +G G+PG +G G GP
Sbjct: 675 GPSGPSGSNGRNGVKGTPGRDGEPGIPGPDGRPGERGP 712
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
GRPG G G G KG++G G G PG +G G PG V
Sbjct: 705 GRPGERGPGGEIGRKGEKGPSGERGYPGKDGRAGEPGAV 743
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G G G+ G +G+KG++G GV G G GPRG GP+
Sbjct: 861 GPQGDKGNRGPRGEKGEQGPPGVAGTDGPPGPRGNVGPM 899
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G+ G GS G +G G +G+ G+ G PG GP G PGP
Sbjct: 636 GQRGRLGSKGGEGTPGSQGMPGMSGPPGRPGPPGPPGP 673
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
+ G PG +G++G G +G+ G G +G PG GP G PGP
Sbjct: 877 EQGPPGVAGTDGPPGPRGNVGPMGPMGDPGLPGPPGPPGP 916
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G G+ GAKG +G+RG VG PG +G GAPG
Sbjct: 531 GASGRRGAPGAKGSRGERG--RVGPPGIDGKDGAPG 564
Score = 37.9 bits (84), Expect = 0.009
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
GRPGP G G G G G G G PG +G G PGP
Sbjct: 663 GRPGPPGPPGPPGPSGPSGSNGRNGVKGTPGRDGEPGIPGP 703
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G+PG +G+NG G G +G G G PG G +G PGP
Sbjct: 786 GKPGINGTNGRGGIPGLKGERGSPGEPGKAGKQGPPGP 823
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGD---KGDRGVEGV-GLPGTEGPRGAPGP 243
G PG G+ G G+ KG RG G G PG +GP+G GP
Sbjct: 174 GAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQGPQGPSGP 214
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G PGP G G KG+ G G G G G +G G GPV
Sbjct: 570 GPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGASGPTGPV 608
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/36 (52%), Positives = 19/36 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
GRPG G G KG G G G PG GP GAPG
Sbjct: 225 GRPGEPGLPGDKGAMGGPGP--AGQPGIRGPSGAPG 258
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
+TG G +G G GD+G G +G G PG +G + PG
Sbjct: 484 ETGPTGLTGPTGKPGDRGSNGADGTPGEPGAQGTKRKPG 522
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG G+ GA+GD G G +G G G GP+G G
Sbjct: 831 GEPGVQGAKGARGDDGKDGKQGPAGPQGPNGPQGDKG 867
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G PGP GS G G +G G G VGLPG G G G
Sbjct: 90 GAPGPRGSPGLPGPRGSDGPRGQRGEVGLPGESGSAGMVG 129
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+ G+PG +G NG GD+G G G VG G G +GA G
Sbjct: 583 EAGQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKGAKG 621
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G GP ++ A G KG G G G PG GPRG+ GP
Sbjct: 72 GIKGPDPNDLAAGIKGSNGAPGPRGSPGLPGPRGSDGP 109
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G GP G G G+KG+ G G G G G +GA GP
Sbjct: 567 GLNGPPGPQGPAGEKGEAGQPGTNGFNGKNGDQGASGP 604
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
TG+ GP G G G +G RG PG EG RG PG
Sbjct: 155 TGQTGPRGPTGPPGLQGVRGA-----PGNEGARGLPG 186
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-------GLPGTEGPRGAPGP 243
G+ GP G G GD+G G G G PG +G RG PGP
Sbjct: 10 GQRGPDGPPGDIGDQGPSGEAGKPGPLGYNGQPGNQGMRGDPGP 53
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G+ GP G +G G G+ GV+G G G +G G GP
Sbjct: 816 GKQGPPGPSGPLGANGEPGVQGAKGARGDDGKDGKQGP 853
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+ G G G+NG G GD+G G G G GP G G
Sbjct: 580 EKGEAGQPGTNGFNGKNGDQGASGPTGPVGPRGPGGIKG 618
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G+PG G G G +GD+G +G T+ G GP
Sbjct: 40 GQPGNQGMRGDPGPQGDQGPQGPPGGSTQTAGGIKGP 76
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G SG G++G G G G G PG GP G GP
Sbjct: 408 GESGLAGSRGMPGVAGKNGNAGEPGERGPVGPQGP 442
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+G GP G G G KG +GV G G PG G G G
Sbjct: 602 SGPTGPVGPRGPGGIKGAKGVMGSSGRPGITGTLGQRG 639
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G GAKG G G G+ GT G RG G
Sbjct: 609 GPRGPGGIKGAKGVMGSSGRPGI--TGTLGQRGRLG 642
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PGP G+ G G +G +G G GP G PG
Sbjct: 276 GSPGPRGAPGPPGKRGK-----IGRVGPMGPIGDPG 306
>SB_14036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
DTG GP G G G+KGD+GV+G+ G GT+G +G G
Sbjct: 454 DTGITGPQGPKGDTGNKGDQGVQGLRGYNGTQGAKGEAG 492
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
DTG+ GP G G G +G +G G+ G EGP+G G
Sbjct: 325 DTGQQGPKGDTGITGPQGPKG--DTGITGPEGPKGDTG 360
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP G G G G +G +G G+ G EGP+G G
Sbjct: 382 DTGITGPQGPKGDTGITGPQGPKGDTGITGPEGPKGDTG 420
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP G G G G +G +G G+ G +GP+G G
Sbjct: 358 DTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDTG 396
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP G G G G +G +G G+ G +GP+G G
Sbjct: 418 DTGITGPEGPKGDTGITGPQGPKGDTGITGPQGPKGDTG 456
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP G G G G G +G G+ G +GP+G G
Sbjct: 346 DTGITGPEGPKGDTGITGPEGPKGDTGITGPQGPKGDTG 384
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP G G G G G +G G+ G +GP+G G
Sbjct: 406 DTGITGPEGPKGDTGITGPEGPKGDTGITGPQGPKGDTG 444
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G G +G G KGD G++G +GV GL G G +GA G
Sbjct: 453 GDTGITGPQGPKGDTGNKGDQGVQGLRGYNGTQGAKG 489
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/39 (53%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
G+ GP+GS G G KGDRG G VG G +G +G GPV
Sbjct: 3614 GKDGPTGSPGDPGSKGDRGETGDVGAAGAKGDKGDVGPV 3652
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G G KG KGD+G G VG PG G G PG
Sbjct: 3316 GEQGPQGPPGLKGIKGDKGFPGMVGFPGLRGKTGLPG 3352
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G+PG +GS G KG KGD G GLPG G RG GP
Sbjct: 3731 GQPGMAGSQGEKGGKGDPGFP--GLPGQAGLRGLQGP 3765
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
D G G G+ GAKGDKGD G G+ G G +G +G GP
Sbjct: 3630 DRGETGDVGAAGAKGDKGDVGPVGIRGFKGNKGMKGEVGP 3669
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGPV 240
D G G G+NG KG++G +G G G PG++G G GP+
Sbjct: 3687 DKGERGFPGNNGGKGERGAQGPRGEKGNTGAPGSQGSTGPRGPI 3730
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G GP G G KG G+RG+ G+ G PG GP G G
Sbjct: 3489 GTAGPPGFPGLKGSPGERGLSGIDGPPGDAGPVGPRG 3525
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGPV 240
TG PG G NG G G G++G GL G +GP G GPV
Sbjct: 3479 TGAPGIPGRNGTAGPPGFPGLKGSPGERGLSGIDGPPGDAGPV 3521
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G +G+ G KG+ G G++G PG +GP G+PG
Sbjct: 3593 GETGTTGVKGESGTPGLDGS--PGKDGPTGSPG 3623
Score = 36.3 bits (80), Expect = 0.027
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG +G G +G +G +G G G+PG G +G PG
Sbjct: 3752 GLPGQAGLRGLQGPEGQKGSIGAPGIPGKIGEKGVPG 3788
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
TG PG G G G G +G +G + G GP GAPG
Sbjct: 3348 TGLPGKPGK-GKPGPTGPKGEQGRSISGPPGPPGAPG 3383
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
D G PG G G +G G G G G PG GP+G G
Sbjct: 3332 DKGFPGMVGFPGLRGKTGLPGKPGKGKPGPTGPKGEQG 3369
Score = 35.1 bits (77), Expect = 0.062
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G GP G G G +G +GV G P G +GA GP+
Sbjct: 3516 GDAGPVGPRGINGIQGSQGVPGEPGPAGNGEKGAIGPI 3553
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
+TG PG GS G +G G G+ G G +G +G PG
Sbjct: 3714 NTGAPGSQGSTGPRGPIGQPGM--AGSQGEKGGKGDPG 3749
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = -2
Query: 353 GRPGPSG-SNGAKGDKGDRGVEGV-----GLPGTEGPRGAPGP 243
G PGP G S G G +G G G PG +GP G PGP
Sbjct: 3795 GPPGPPGRSKNISGPPGPQGPPGQASQIPGPPGPQGPPGPPGP 3837
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -2
Query: 323 AKGDKGDRGVEGVGLPGTEGPRGAPGP 243
AKGDKG+RG G G +G RGA GP
Sbjct: 3684 AKGDKGERGFPGNN--GGKGERGAQGP 3708
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG G G KG+ G G G+ G PG G G PG
Sbjct: 3450 GEPGVPGFPGLKGEIGLIGPPGLAGSPGQTGAPGIPG 3486
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRG--VEGVGL-PGTEGPRGAPG 246
GP G+ G G KG++G E + P T+G +G PG
Sbjct: 3418 GPVGTRGFPGLKGEKGEPAESTNVNPFTKGVKGEPG 3453
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/39 (53%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G PG G G G KG G+ G G PGT+GPRG PG V
Sbjct: 121 GLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDV 159
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
D GR GP G GA+G G RG +G G +GP+G+ GPV
Sbjct: 194 DAGRAGPQGPQGAEGRTGRRG--SLGERGGKGPQGSRGPV 231
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPR---GAPGPV 240
+ G G G G KG G+ G +G G+PG +GP GAPGPV
Sbjct: 437 ERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAPGPV 480
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
+ G GPSG NGA G G GV G +G PG G G GP
Sbjct: 161 EPGEAGPSGRNGANGTAGPPGVRGQPGAIGSPGDAGRAGPQGP 203
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG +G GA G +GD G G G PG +G GA G
Sbjct: 400 GNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPGAQG 436
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/36 (52%), Positives = 20/36 (55%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG G G KGD+G G G PG G RGAPG
Sbjct: 379 GAPGSPGLGGQKGDQGMPGKP--GNPGAAGLRGAPG 412
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G PG G+ G +GD GD G G G G G G GP
Sbjct: 142 GEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGP 179
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+ G G G++GA G G++G G VG PG G G+PG
Sbjct: 449 EKGHAGEGGADGAPGIPGEQGPMGPVGAPGPVGNAGSPG 487
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPG 273
DTG G G++G KGD+G G+ G G+PG
Sbjct: 248 DTGEAGEHGADGLKGDRGADGLPGEDGIPG 277
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+ G PG G +GA G +G+RG G G G +G G G
Sbjct: 419 ERGEPGAPGRDGAPGAQGERGPRGEQGKQGEKGHAGEGG 457
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 7/43 (16%)
Frame = -2
Query: 353 GRPGPSGSN------GAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G GP G+N GA GD G+ G G GL G G G PG
Sbjct: 229 GPVGPRGANGVPGSPGADGDTGEAGEHGADGLKGDRGADGLPG 271
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG G G G G G G G PG+ GP G G
Sbjct: 460 GAPGIPGEQGPMGPVGAPGPVGNAGSPGSPGPSGPKG 496
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G NGA+G G +G G PG +G +G PGP
Sbjct: 121 GSPGPQGFNGARGPNGPKG--DSGRPGQDGRQGPPGP 155
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G G GS G G+ GD+GV+G G PG +G GA GP
Sbjct: 97 GPEGDPGSPGGSGEAGDKGVDGPPGSPGPQGFNGARGP 134
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
G PG G G +G +GD G G G G +GP G+PGP
Sbjct: 85 GAPGRQGLQGKRGPEGDPGSPGGSGEAGDKGVDGPPGSPGP 125
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGP---RGAPGP 243
G GP G+ G G+ G G+EG+ G G +GP RG GP
Sbjct: 19 GAIGPQGNKGYAGNPGTLGLEGLRGRTGAQGPIGDRGRSGP 59
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLP-----GTEGP-RGAPGP 243
D+GRPG G G G G RG G P GP +G PGP
Sbjct: 140 DSGRPGQDGRQGPPGPPGARGEPGQQAPMMIQVSRPGPNKGPPGP 184
>SB_7160| Best HMM Match : Collagen (HMM E-Value=1e-04)
Length = 60
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 6/43 (13%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV------GLPGTEGPRGAPGP 243
GRPG +G+ G G KG++G+EG+ G PG +G RG GP
Sbjct: 7 GRPGQNGTAGFSGQKGEKGLEGITITGEKGNPGPKGDRGIQGP 49
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 13/50 (26%)
Frame = -2
Query: 353 GRPGPSGSNGAKG---DKGDRGVEGV----------GLPGTEGPRGAPGP 243
G PGP GS GA G +KGD G++G GLPG +GP G PGP
Sbjct: 121 GAPGPPGSPGAPGLPGEKGDPGLQGAPGAAGLPGAPGLPGPQGPMGPPGP 170
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G PGP G G G G G G VG G G GAPGP
Sbjct: 88 GAPGPPGEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGP 125
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG G G G G G +G G PG GP G+PG
Sbjct: 94 GEPGQVGMAGPPGPPGHVGEDGAPGAPGAPGPPGSPG 130
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
G G +G+NG G KG+ G EG G PG GP G GPV
Sbjct: 808 GPEGEAGANGVSGPKGEMGPEGEAGQPGPPGPPGPNGPV 846
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGPV 240
+ G PG G GA G +G RG++G G PG +GP G GP+
Sbjct: 593 EQGLPGARGKQGANGPRGPRGIKGASGLQGGPGLQGPGGFKGPI 636
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
GR GP G NGA G G+ G +G G PG+EGP G PG
Sbjct: 120 GRRGPPGQNGAPGLDGENGEQGQKGSSGDPGSEGPVGPPG 159
Score = 40.3 bits (90), Expect = 0.002
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 10/49 (20%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG----------VGLPGTEGPRGAPGP 243
D G PG SG++GAKG KG G G GLPG G +GA GP
Sbjct: 560 DRGSPGVSGASGAKGAKGHEGGRGKRGQRGETGEQGLPGARGKQGANGP 608
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PGP G NG G G RG G G PG +GP G G
Sbjct: 778 GIPGPQGKNGKMGPTGPRGPSGKNGEPGPQGPEGEAG 814
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
+ GR GP G+NG +G G G EG +G G +G RG G V
Sbjct: 375 EAGRQGPPGANGDRGQPGAPGAEGAMGEKGNQGSRGPTGRV 415
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
D G+PG G+ GA G+KG++G G VG G GP+G G
Sbjct: 387 DRGQPGAPGAEGAMGEKGNQGSRGPTGRVGPDGKTGPKGQNG 428
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G GP G G G G G+ G G PG++G +G PGP
Sbjct: 733 GEAGPDGPAGPAGLDGKNGINGEDGAPGSDGAQGNPGP 770
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
TG GPSG NG G +G G G G GP+G GP
Sbjct: 792 TGPRGPSGKNGEPGPQGPEGEAGAN--GVSGPKGEMGP 827
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PGP GS G G +G G G G PG G GA G
Sbjct: 365 GMPGPRGSTGEAGRQGPPGANGDRGQPGAPGAEGAMG 401
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-------VGLPGTEGPRGAPGP 243
+ G+PGP G G G G G G G PG GPRG GP
Sbjct: 830 EAGQPGPPGPPGPNGPVGQTGQPGTPGPDGAAGEPGARGPRGKLGP 875
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+G PGP G GA G G G +G G PG G GA G
Sbjct: 537 SGSPGPGGLQGAAGMPGPAGPKGDRGSPGVSGASGAKG 574
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGP---RGAPGP 243
G PGP G G +G G +G G +G G GP G PGP
Sbjct: 766 GNPGPQGPTGTRGIPGPQGKNGKMGPTGPRGPSGKNGEPGP 806
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G P G+NG +G G G G G G +G G PGP
Sbjct: 520 GVRAPDGANGQRGVTGPSGSPGPG--GLQGAAGMPGP 554
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GPSGS G G +G G+ G G +G RG+PG
Sbjct: 532 GVTGPSGSPGPGGLQGAAGMPGPA--GPKGDRGSPG 565
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG 288
TGR GP G G KG G G +G
Sbjct: 412 TGRVGPDGKTGPKGQNGIPGRDG 434
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV 285
G+ G G G G+KG RG +GV
Sbjct: 317 GQGGQKGQQGITGEKGARGTQGV 339
>SB_21796| Best HMM Match : COLFI (HMM E-Value=0)
Length = 1239
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
+ G PG G+ GAKG KG G GL G GP G PGPV
Sbjct: 204 ERGEPGEPGAAGAKGAKGQPGPP--GLVGEPGPEGEPGPV 241
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-------VGLPGTEGPRGAPGPV 240
G+PG G GA GD+G+RG G G PG GP G PGP+
Sbjct: 114 GQPGAQGRPGAPGDRGERGSAGSDGPKGEAGGPGPLGPIGPPGPI 158
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
TG+PG G +G +G G RG G G PG EG RG GP
Sbjct: 940 TGKPGKYGDDGLEGSPGPRGPIGPQGDPGPEGERGQSGP 978
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 350 RPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
R GP G G KG+KG G +G G PG G RG+ G
Sbjct: 100 RRGPPGDPGPKGNKGQPGAQGRPGAPGDRGERGSAG 135
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G G +GD G G G G GP G PGP
Sbjct: 953 GSPGPRGPIGPQGDPGPEGERGQS--GPPGPPGPPGP 987
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
+ G GP+G G G KGDRG +G G G +G G GPV
Sbjct: 237 EPGPVGPTGVPGLPGVKGDRGEQGARGEKGEQGKTGERGPV 277
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
PG G G G GD G+EG G G GP+G PGP
Sbjct: 934 PGDPGYTGKPGKYGDDGLEGSPGPRGPIGPQGDPGP 969
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G+PGP G G G +G+ G G GLPG +G RG G
Sbjct: 221 GQPGPPGLVGEPGPEGEPGPVGPTGVPGLPGVKGDRGEQG 260
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PGP G G G G G+ GV G G +G RG G
Sbjct: 230 GEPGPEGEPGPVGPTGVPGLPGVKGDRGEQGARGEKG 266
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAP 249
G G G GA+G+KG++G G VG G G G P
Sbjct: 251 GVKGDRGEQGARGEKGEQGKTGERGPVGEAGRPGQNGLP 289
>SB_33160| Best HMM Match : Collagen (HMM E-Value=0.00022)
Length = 94
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G GP G NG++G KGD+GV+G G GT+GP+G G
Sbjct: 38 GPMGPRGYNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQG 77
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVG 282
G GP G NG +G KGD+GV+GVG
Sbjct: 59 GPIGPQGYNGTQGPKGDQGVKGVG 82
>SB_9863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G G KGD+G++G + G G +GP GA GP
Sbjct: 476 GDPGPQGQQGPKGDQGEQGPK--GSQGPQGPIGALGP 510
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G GP G G KGD G +G +G G G +GP+G+ GP
Sbjct: 464 GPRGPQGEQGLKGDPGPQGQQGPKGDQGEQGPKGSQGP 501
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G+PGP G G +G +G +GV+G G G GP GAPG
Sbjct: 71 GKPGPEGPAGVQGMEGRQGVQGKDGEEGPPGPNGAPG 107
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G PGP G+ G G+ G+ G+ G G PGT+G G GP+
Sbjct: 1159 GGPGPGGTRGPVGEAGEDGLHGKDGKPGTQGVSGNDGPI 1197
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
G GP G +G KG +GDRG G +G G G RG PGP
Sbjct: 35 GMSGPKGYSGEKGMQGDRGENGLPGKLGHQGKRGRRGKPGP 75
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G+ G GS+G G++GDRG+ GV G PG +G G G
Sbjct: 233 GKRGDPGSDGIPGERGDRGILGVQGEPGKDGSPGLKG 269
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGPV 240
TG PG +G G G GD GV G +G+ G GP G PG +
Sbjct: 412 TGYPGRNGRQGMPGADGDDGVPGSAGLMGVRGPVGPEGLPGAI 454
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
+TG GP+G G +G G G G G G GP+G PGP
Sbjct: 1124 ETGGLGPTGPVGEQGSYGLPGKPGSPGTKGLPGPKGGPGP 1163
Score = 35.5 bits (78), Expect = 0.047
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G+ G +G G G G++G G+ G PG+ G +G PGP
Sbjct: 1120 GQSGETGGLGPTGPVGEQGSYGLPGKPGSPGTKGLPGP 1157
Score = 35.1 bits (77), Expect = 0.062
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPG 246
G GP G NGA G G RG +G GLPG G +G G
Sbjct: 95 GEEGPPGPNGAPGRPGVRGPKGESGSRGLPGNHGVQGERG 134
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PGP G G +GD G G+ G G G G +G PG
Sbjct: 224 GLPGPPGRRGKRGDPGSDGIPGERGDRGILGVQGEPG 260
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLP-GTEGPRGAPG 246
G PGP G G +G +G RG G+ P G G +G G
Sbjct: 14 GNPGPMGLKGRRGPRGMRGKAGMSGPKGYSGEKGMQG 50
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG G G KG+ G RG+ G G+ G G +G G
Sbjct: 104 GAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRG 140
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
GR G G NG +G G G +GV PG+ G G GPV
Sbjct: 410 GRTGYPGRNGRQGMPGADGDDGV--PGSAGLMGVRGPV 445
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-------VGLPGTEGPRGAPGP 243
G GP G G GD+G G+ G G G G RG PGP
Sbjct: 185 GSEGPYGPQGMTGDRGKPGLVGDPGKKGMAGRAGAMGMRGLPGP 228
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G GA GD+G RG G G G GA G
Sbjct: 664 GLRGPQGDIGANGDRGKRGERGPN--GQSGKPGAKG 697
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRG 255
G PG G+ G +G +G+RG +G E G
Sbjct: 263 GSPGLKGTRGTRGKRGERGRKGDMCDSEESEEG 295
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 341 PSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
P G++G G G G G +G G GP+G+ GP
Sbjct: 487 PVGASGPTGGMGLIGKPGEMGSSGPAGPQGSAGP 520
>SB_6487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
G GP G NG++G KGD+GV+G G GT+GP+G G
Sbjct: 822 GPMGPRGFNGSQGPKGDQGVQGPIGPQGYNGTQGPKGDQG 861
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRG 255
G GP G NG +G KGD+G++G GT+G G
Sbjct: 843 GPIGPQGYNGTQGPKGDQGIQGFN--GTKGESG 873
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVG 282
G GP G G +G G +G GVG
Sbjct: 852 GTQGPKGDQGIQGFNGTKGESGVG 875
>SB_3936| Best HMM Match : Collagen (HMM E-Value=7.5e-24)
Length = 270
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
D G PGP G+ G +G G G GLPG G G PGP
Sbjct: 19 DAGPPGPEGNMGPRGQPGPEG--SPGLPGERGTGGVPGP 55
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G+PGP GS G G++G GV PG +G +GAPG +
Sbjct: 33 GQPGPEGSPGLPGERGTGGV-----PGPKGKQGAPGTI 65
Score = 35.9 bits (79), Expect = 0.036
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTE-----GPRGAPGP 243
G PG G G++GD GD G G GLPG + GP G GP
Sbjct: 60 GAPGTIGFPGSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGP 102
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTE--GPRGAPGP 243
G PG G NGA G KGD G G G PG + GP+G GP
Sbjct: 110 GAPGIIGMNGAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGP 152
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAP 249
PGP G +G G+KG GV+G PG +GP+ P
Sbjct: 144 PGPKGMDGPPGEKGLPGVQGD--PGIKGPKAEP 174
Score = 35.1 bits (77), Expect = 0.062
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G G G G KG G G+ +PG +G G PG
Sbjct: 119 GAMGKKGDTGPLGPKGQPGSPGIDIPGPKGMDGPPG 154
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDK--GDRGVEGV----GLPGTEGPRGAPGP 243
DTG GP G G+ G G +G++G GLPG +G G GP
Sbjct: 126 DTGPLGPKGQPGSPGIDIPGPKGMDGPPGEKGLPGVQGDPGIKGP 170
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G +G G G KG G + GLPG G G PG
Sbjct: 69 GSRGDTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPG 104
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDK--GDRGVEG-VGLPGTEGPRGAPG 246
DTG GP G+ G G + G G G G PG++G GAPG
Sbjct: 73 DTGDLGPPGAKGLPGAQQYGLPGPLGEAGPPGSQGSPGAPG 113
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
D G GP G G KG K G PG +G RG GP
Sbjct: 198 DQGPIGPPGRPGPKGPKDTCPRCPPGPPGPKGKRGETGP 236
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PG +G+ G +G G G G P PR PGP
Sbjct: 188 GEPGATGNVGDQGPIGPPGRPGPKGPKDTCPRCPPGP 224
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPG 273
G PG G G G G+RG G+ G PG
Sbjct: 241 GEPGADGVRGPDGSTGERGETGLDGAPG 268
>SB_18895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G PGP G NG +G +G+RG G GL G +G +G PGP
Sbjct: 167 GAPGPPGVNGLQGLQGERGPIGPKGLMGDKGVQGLPGP 204
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGP 243
G PG G+NG +G G G G GL G +G RG GP
Sbjct: 149 GMPGRDGTNGKEGSPGPPGAPGPPGVNGLQGLQGERGPIGP 189
Score = 33.1 bits (72), Expect = 0.25
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGV 294
+ G PG G G KG+KGD+GV
Sbjct: 216 ENGEPGARGDTGRKGEKGDKGV 237
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
GP G G+ G G G++G PG +GP G PG
Sbjct: 122 GPRGPAGSPGMPGRNGLDG--RPGMDGPMGMPG 152
>SB_15904| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 376
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
+G GP G NG++G G G +G G PGT+GP+G GP
Sbjct: 202 SGSTGPRGYNGSRGPPGPSGPQGQQGPPGTKGPQGFMGP 240
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGP 243
G GP G NG G +G +G G G G GPRG GP
Sbjct: 236 GFMGPRGHNGTAGQQGPQGPPGPKGDTGPAGPGGPRGNQGP 276
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G+ GP G G KGD G G G G +GP G G
Sbjct: 248 GQQGPQGPPGPKGDTGPAGPGGP--RGNQGPPGPSG 281
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD-RGVEGV-GLPGTEGPRGAPGP 243
D G PG G G +G+ G+ G++G GLPG GP G PGP
Sbjct: 150 DVGPPGNPGGPGLQGNHGNPAGIQGPNGLPGPNGPLGPPGP 190
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G+PGP G NG G GD G GLPG GP+ PGP
Sbjct: 347 GQPGPPGINGPPGPLGDVGPP--GLPGPPGPQMPPGP 381
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G+PGP G NG G GD G GLPG GP+ PGP
Sbjct: 432 GQPGPPGINGPPGPLGDVGPP--GLPGPPGPQMPPGP 466
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G+PGP G NG G GD G GLPG GP+ PGP
Sbjct: 517 GQPGPPGINGPPGPLGDVGPP--GLPGPPGPQMPPGP 551
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP+G NG G+ GD G G PG GP+ PGP
Sbjct: 92 GLPGPNGVNGPPGELGDMGPPGP--PGPPGPQMPPGP 126
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP+G G G GD G G LPG +GP+ PGP
Sbjct: 177 GLPGPNGPLGPPGPPGDMGPPG--LPGPQGPQMPPGP 211
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G+PGP G NG G G+ G G+ G PG P PGP
Sbjct: 772 GQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGP 809
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G+PGP G NG G G+ G G+ G PG P PGP
Sbjct: 857 GQPGPPGINGPPGQVGEMGPPGLPGPPGPASPPSPPGP 894
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PGP G G G +G G +G GLPG GP G GP
Sbjct: 43 GPPGPDGPPGFPGPQGPNGPKGPPGLPGPPGPPGFQGP 80
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G+PGP G NG G+ G+ G GLPG GP P P
Sbjct: 602 GQPGPPGVNGPPGEIGEIG--PAGLPGPPGPASPPSP 636
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G+PGP G NG G G+ G G+ G PG P PGP
Sbjct: 687 GQPGPPGINGPPGQIGEMGPPGLPGPPGPASPPSPPGP 724
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G PGP G G G G G G PGT GP G PG V
Sbjct: 198 GLPGPQGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDV 236
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVE----GVGLPGTEGPRGAPG 246
G PGP G G G G +G + GLPG GP+G PG
Sbjct: 186 GPPGPPGDMGPPGLPGPQGPQMPPGPPGLPGAPGPKGPPG 225
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G PGP G G G G G G PGT GP G PG V
Sbjct: 283 GLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDV 321
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G PGP G G G G G G PGT GP G PG V
Sbjct: 368 GLPGPPGPQMPPGPPGLPGAPGPKGPPGTNGPLGPPGDV 406
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRP-GPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G P GP G NG G G G G PG GP G PGP
Sbjct: 252 GNPAGPQGPNGLPGPNGILGPPGP--PGDMGPPGLPGP 287
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLP-GTEGPRGAPGP 243
G GP G +G G+ G G +G G P G +GP G PGP
Sbjct: 653 GPLGPPGESGPAGNAGGVGYQGNHGNPAGVQGPNGQPGP 691
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVE----GVGLPGTEGPRGAPG 246
G PGP G G G G G + GLPG GP+G PG
Sbjct: 271 GPPGPPGDMGPPGLPGPPGPQMPPGPPGLPGAPGPKGPPG 310
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G G +G G+ +G PG GP G GP
Sbjct: 67 GLPGPPGPPGFQGPPGNPA-GAIGPPGLPGPNGVNGP 102
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD-RGVEGV-GLPGTEGPRGAPGPV 240
D G PG G G +G+ G+ G +G G PG G G PGP+
Sbjct: 320 DVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPL 361
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD-RGVEGV-GLPGTEGPRGAPGPV 240
D G PG G G +G+ G+ G +G G PG G G PGP+
Sbjct: 405 DVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPL 446
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLP-GTEGPRGAPGP 243
G GP G G G+ G G +G G P G +GP G PGP
Sbjct: 483 GPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGP 521
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLP-GTEGPRGAPGP 243
G GP G G G+ G G +G G P G +GP G PGP
Sbjct: 568 GPLGPPGEAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGP 606
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLP-GTEGPRGAPGP 243
G GP G G G+ G G +G G P G++GP G PGP
Sbjct: 738 GPLGPPGECGPAGNAGGVGCQGHHGNPAGSQGPNGQPGP 776
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLP-GTEGPRGAPGP 243
G GP G G G+ G G +G G P G++GP G PGP
Sbjct: 823 GPLGPPGECGPAGNAGGVGCQGNHGNPAGSQGPNGQPGP 861
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
G GP G+NG G GD G G G PG +G G P +
Sbjct: 134 GPAGPPGTNGELGPPGDVGPPGNPGGPGLQGNHGNPAGI 172
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAP-GP 243
G GP G+NG G GD G G G PG +G G P GP
Sbjct: 219 GPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGP 257
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAP-GP 243
G GP G+NG G GD G G G PG +G G P GP
Sbjct: 304 GPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGP 342
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLP-GTEGPRGAPGP 243
G GP G G G+ G G +G G P G +GP G PGP
Sbjct: 313 GPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGP 351
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAP-GP 243
G GP G+NG G GD G G G PG +G G P GP
Sbjct: 389 GPKGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGNPAGP 427
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLP-GTEGPRGAPGP 243
G GP G G G+ G G +G G P G +GP G PGP
Sbjct: 398 GPLGPPGDVGPPGNPGGPGYQGNHGNPAGPQGPNGQPGP 436
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD-RGVEGV-GLPGTEGPRGAPGPV 240
+ G PG G G +G+ G+ G +G G PG G G PGP+
Sbjct: 490 EAGPPGNPGGPGYQGNHGNPAGPQGPNGQPGPPGINGPPGPL 531
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PGP G G G G G PG GP G PG
Sbjct: 623 GLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPG 659
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PGP G G G G G PG GP G PG
Sbjct: 708 GLPGPPGPASPPSPPGPPGPPGPNGPPGPNGPLGPPG 744
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PGP G G G G G PG GP G PG
Sbjct: 793 GLPGPPGPASPPSPPGPPGPPGPKGPPGPNGPLGPPG 829
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -2
Query: 353 GRPGPSGS---NGAKGDKGDRGVEG-VGLPGTEGPRGAP-GP 243
G PGP+G NG G G+ G G G PG +G G P GP
Sbjct: 471 GAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGP 512
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = -2
Query: 353 GRPGPSGS---NGAKGDKGDRGVEG-VGLPGTEGPRGAP-GP 243
G PGP+G NG G G+ G G G PG +G G P GP
Sbjct: 556 GAPGPNGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGNPAGP 597
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
GRPG G G +G +G RG G PG+ GP+G PG
Sbjct: 135 GRPGHPGQKGTRGRRGQRGRRGN--PGSPGPKGTPG 168
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
GR G GS G KG KG++G G+G+ G +GAPG
Sbjct: 171 GRRGAVGSKGMKGQKGEKGERGIGV---RGEKGAPG 203
>SB_27478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLP-GTEGPRGAPGP 243
DTG GP+G G G KGD G G P G GP+G GP
Sbjct: 185 DTGATGPAGPAGPTGPKGDTGATGPTDPTGPTGPKGPTGP 224
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
DTG GP+G G KGD G G G G G +G GA GP
Sbjct: 152 DTGATGPTGPTGPKGDTGATGPAGPTGPTGPKGDTGATGP 191
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP+G G G KGD G G G G GP+G G
Sbjct: 167 DTGATGPAGPTGPTGPKGDTGATGPAGPAGPTGPKGDTG 205
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP+G G G KGD G G G G GP+G G
Sbjct: 272 DTGATGPAGPTGPTGPKGDTGATGPAGPTGPTGPKGDTG 310
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
DTG GP+G G G KGD G G G +G GA GP
Sbjct: 242 DTGATGPTGPTGPTGPKGDTG--ATGPTGPKGDTGATGP 278
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
DTG GP+G G KGD G G G G +G GA GP
Sbjct: 32 DTGATGPTGPTGPKGDTGATG--PTGPTGPKGDTGATGP 68
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP+G G KGD G G G G G GP G G
Sbjct: 47 DTGATGPTGPTGPKGDTGATGPTGPKGDTGATGPTGPKG 85
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
DTG GP+G G G G G +G G G GP G GP
Sbjct: 74 DTGATGPTGPKGDTGATGPNGPKGDTGATGPAGPTGPTGP 113
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRG-VEGVGLPGTEGPRGAPGP 243
DTG GP+G G G KGD G + G G G G GP
Sbjct: 98 DTGATGPAGPTGPTGPKGDTGPTDPTGPNGDTGATGPTGP 137
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP+G G G G G +G G G GP G G
Sbjct: 8 DTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKG 46
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG P+G NG G G G +G G G GP+G G
Sbjct: 116 DTGPTDPTGPNGDTGATGPTGPKGDTGATGPTGPKGDTG 154
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP+G G G G G +G G G GP G G
Sbjct: 128 DTGATGPTGPKGDTGATGPTGPKGDTGATGPTGPTGPKG 166
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
+ G GP+ G KGD G G G G G +G GA GP
Sbjct: 227 EIGATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGP 266
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLP 276
DTG GP+G G G KGD G G +P
Sbjct: 290 DTGATGPAGPTGPTGPKGDTGATGPLIP 317
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP+ G G KG G +G +G G P G G
Sbjct: 203 DTGATGPTDPTGPTGPKGPTGPKGEIGATGPTDPTGPKG 241
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
DTG GP+ G KGD G G G G G +G GA GP
Sbjct: 260 DTGATGPT---GPKGDTGATGPAGPTGPTGPKGDTGATGP 296
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G+ G G GAKG +G G G GLPGT+G G PG
Sbjct: 114 GKRGSRGRTGAKGSRGKEGKRGKTGLPGTDGRDGRPG 150
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G+ G G KGD G+ G G PG GP G+ G
Sbjct: 222 GPQGPKGARGITGPKGDAGITGPKGTPGDPGPTGSRG 258
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G+ G G G KGDKGD G +G+ GL G G G PG
Sbjct: 162 GKIGLPGIPGMKGDKGDPGKQGLTGLTGAPGSPGLPG 198
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-------GLPGTEGPRGAPGPV 240
GR G GS G +G +G G+ G G+PG GP G PG +
Sbjct: 120 GRTGAKGSRGKEGKRGKTGLPGTDGRDGRPGVPGPIGPIGPPGKI 164
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG G G G KGD+G G GL G G G+PG
Sbjct: 159 GPPGKIGLPGIPGMKGDKGDPGKQGLTGLTGAPGSPG 195
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPG 273
D G GP G+ G G G RG G GLPG
Sbjct: 238 DAGITGPKGTPGDPGPTGSRGRPGKPGLPG 267
>SB_30076| Best HMM Match : Collagen (HMM E-Value=8.9e-07)
Length = 198
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G G G+ G KGDKGD+G +G+ GL G +G +G G
Sbjct: 98 GLQGAQGARGLKGDKGDKGDQGIQGLKGDKGDKGEKG 134
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGPV 240
D G G G G KGDKGD+G +G GL G +G P+
Sbjct: 111 DKGDKGDQGIQGLKGDKGDKGEKGDKGDQGLKGNQGVSATATPI 154
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/37 (54%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G GA G KG+ G G PG +GP G PGP
Sbjct: 1798 GPPGPPGPPGAIGWKGNPG-NPAGPPGLDGPPGPPGP 1833
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G G +G G G G PG +GP G PGP
Sbjct: 1692 GPPGPPGLPGPQGIPGYPGAPA-GPPGRDGPMGPPGP 1727
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDR----GVEGV-GLPGTEGPRGAPG 246
G PGP G+ G KG+ G+ G++G G PG +GP+G PG
Sbjct: 1801 GPPGPPGAIGWKGNPGNPAGPPGLDGPPGPPGPQGPKGWPG 1841
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -2
Query: 353 GRPG-PSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG P+G G G G G +G G PG GP G PG
Sbjct: 1813 GNPGNPAGPPGLDGPPGPPGPQGPKGWPGVPGPPGPPG 1850
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 341 PSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
PS + G +G GV+G GL G +GP+G PGP
Sbjct: 1766 PSQAASYIGTQGASGVDGPPGLAGPQGPKGMPGP 1799
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -2
Query: 353 GRP-GPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G P GP G +G G G +G +G G+PG GP GA G
Sbjct: 1816 GNPAGPPGLDGPPGPPGPQGPKGWPGVPGPPGPPGAYG 1853
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
PGP G +G G G +G +G G GP G PGP
Sbjct: 1670 PGPPGPDGPMGLPGPQGPDGP--KGPPGPPGLPGP 1702
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGPV 240
G G++G G G G +G G+PG GP G PG +
Sbjct: 1774 GTQGASGVDGPPGLAGPQGPKGMPGPPGPPGPPGAI 1809
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G PGPSG G GD G G G+G + R A V
Sbjct: 1723 GPPGPSGGQGPPGDMGSMGPMGMGGEHKDFKRSASAQV 1760
Score = 32.3 bits (70), Expect = 0.44
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGD-RGVEGV-GLPGTEGPRGAPGP 243
G PGP G+ G KG G+ G G G+PG G +G GP
Sbjct: 1844 GPPGPPGAYGWKGYPGNPAGPPGRDGIPGPPGRQGGKGP 1882
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
P P + G G G G+ G G +GP+G PGP
Sbjct: 1664 PPPPPAPGPPGPDGPMGLPGP--QGPDGPKGPPGP 1696
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PGP+G G+KG+KG+RG G G GP G PG
Sbjct: 23 GPPGPAGPPGSKGEKGNRGRR--GRRGPRGPPGKPG 56
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG 288
G PGP G G KGD G RG++G
Sbjct: 65 GPPGPKGDKGEKGDAGPRGLKG 86
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGP-RGAP 249
G+PG G G KGDKG++G G GL G G R AP
Sbjct: 59 GKPGIRGPPGPKGDKGEKGDAGPRGLKGDPGKIRDAP 95
>SB_17315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
++G PG G+ G G++G RG G PG +GP G PGP
Sbjct: 292 ESGAPGLIGAEGPVGEEGGRGRPGK--PGADGPEGLPGP 328
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/39 (51%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
G+ GP+G G GD+G RG EG G G G GA GPV
Sbjct: 267 GQAGPAGKRGMIGDRGVRGAEGNKGESGAPGLIGAEGPV 305
Score = 37.9 bits (84), Expect = 0.009
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGP 243
TG PG +G GA G G G +G G PG GPRG GP
Sbjct: 27 TGPPGLAGGVGANGPSGRGGSQGPPGPPGAPGQPGPRGIKGP 68
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G GP G G +G G G +G GLPG G G PG
Sbjct: 300 GAEGPVGEEGGRGRPGKPGADGPEGLPGPAGDDGRPG 336
Score = 34.7 bits (76), Expect = 0.082
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGV---EGV-GLPGTEGPRGAPG 246
G+PG GS G G G RG+ GV G G +G GAPG
Sbjct: 258 GKPGKPGSRGQAGPAGKRGMIGDRGVRGAEGNKGESGAPG 297
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGPV 240
G G SGS G GDKG G G G G GP G G +
Sbjct: 240 GNVGKSGSKGESGDKGQPGKPGKPGSRGQAGPAGKRGMI 278
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G GA G G RG++G PG G G G
Sbjct: 46 GSQGPPGPPGAPGQPGPRGIKGP--PGRAGGTGLMG 79
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G GP G G KGD+GD+G++G G G +G +GA G
Sbjct: 249 GLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQGAQG 285
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
T + G G G KGDKGDRG +G+ G G +G +G G
Sbjct: 245 TFKQGLRGPKGDKGDKGDRGDQGIQGFKGDKGDKGDQG 282
Score = 31.5 bits (68), Expect = 0.76
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG 288
D G G G G KGDKGD+G +G
Sbjct: 262 DRGDQGIQGFKGDKGDKGDQGAQG 285
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG 288
D G G G G KGDKGD+G +G
Sbjct: 259 DKGDRGDQGIQGFKGDKGDKGDQG 282
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
TG+ GP G GA+G KG RG+ GL G GPRG G
Sbjct: 114 TGKQGPRGWTGARGPKGIRGLR--GLKGPIGPRGLKG 148
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G GA+G +G RG G G PG GPRG G
Sbjct: 178 GLTGPQGKTGARGPQGLRGYRGFTGKPGLTGPRGLKG 214
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G+ G +G KG RGV+G G G +G GAPG
Sbjct: 313 GLRGPQGNQGLRGLKGSRGVQGRPGKNGAKGRNGAPG 349
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
GRPG G GA+G G RG+ G+ G G +G RG G
Sbjct: 292 GRPGSKGKTGARGATGPRGLRGLRGPQGNQGLRGLKG 328
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
TG+ G G+ GA+G +G RG G G G GP+GA G
Sbjct: 471 TGKTGQKGAKGARGTQGVRGPRGYRGPQGLRGPQGAKG 508
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG +G GAKG G RG GL G++G RGA G
Sbjct: 241 GTPGKNGRPGAKGAMGPRGYR--GLTGSKGARGARG 274
Score = 35.5 bits (78), Expect = 0.047
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Frame = -2
Query: 356 TGRPG---PSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
TG+PG P G GA+G G RG G G+PG G G PG
Sbjct: 201 TGKPGLTGPRGLKGARGATGPRGYTGRTGLRGVPGKSGRNGTPG 244
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
TG GP G G +G G RG++G G G +G +GA G
Sbjct: 447 TGATGPQGLRGYRGYTGARGLQGKTGKTGQKGAKGARG 484
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
TG GP G G G +G RGV G G G G G GP
Sbjct: 375 TGLRGPQGPRGFTGKQGLRGVPGRTGKTGANGKPGLRGP 413
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G GP G G++G G RG+ G+ G G+ G RG G
Sbjct: 139 GPIGPRGLKGSRGFMGPRGLRGLKGTTGSRGYRGLKG 175
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G G G NGAKG G G G G GPRG G
Sbjct: 331 GVQGRPGKNGAKGRNGAPG--RTGARGKIGPRGFTG 364
>SB_41194| Best HMM Match : Collagen (HMM E-Value=5.9e-29)
Length = 407
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G GP G G KGD G +G G G GT+G G PGP
Sbjct: 333 GEQGPQGPVGMKGDNGPQG--GAGSRGTKGEAGPPGP 367
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G GP+G G G G G +GV PGT G +G PGP
Sbjct: 372 GNVGPAGQVGNNGQDGTPGKDGV--PGTNGGKGQPGP 406
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G GP G G++G KG+ G PG GP+G GP
Sbjct: 345 GDNGPQGGAGSRGTKGE-----AGPPGPNGPKGNVGP 376
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
D G G +GS G KG+ G G G G GP G G
Sbjct: 346 DNGPQGGAGSRGTKGEAGPPGPNGP--KGNVGPAGQVG 381
>SB_7373| Best HMM Match : Collagen (HMM E-Value=9.3e-13)
Length = 456
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
DTG G +G+ G KGDKGD G G G G +G +G G
Sbjct: 302 DTGANGTAGAPGVKGDKGDTGASGAKGEAGVKGDKGDQG 340
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPG 246
DTG G G G KGDKGD+GV G G+ G G +G G
Sbjct: 320 DTGASGAKGEAGVKGDKGDQGVMGAKGDQGIQGFNGTKGEKG 361
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G G G G KGDKGD G G G PG +G +G G
Sbjct: 286 GPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTG 322
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G NG++G G +G++G GL G +G GA G
Sbjct: 271 GPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANG 307
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
D G G SG+ G G KGD+G +GV G G +G +G G
Sbjct: 317 DKGDTGASGAKGEAGVKGDKGDQGVMGAKGDQGIQGFNG 355
>SB_3909| Best HMM Match : Collagen (HMM E-Value=0.0013)
Length = 496
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G NG++G KGD+GV+G VG G G +G+ G
Sbjct: 365 GPMGPRGYNGSQGPKGDQGVQGPVGPQGYNGTQGSKG 401
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGV 294
G GP G NG +G KGD+GV
Sbjct: 386 GPVGPQGYNGTQGSKGDQGV 405
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVG 282
D G GP G G G +G +G +GVG
Sbjct: 381 DQGVQGPVGPQGYNGTQGSKGDQGVG 406
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/33 (54%), Positives = 21/33 (63%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
GP G G +G GDRG +G+ PG GPRGA G
Sbjct: 174 GPQGLRGPRGYSGDRGPQGI--PGDMGPRGAKG 204
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/41 (51%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAP---GPV 240
G PG G GAKGDKGDRG G G+ PR P GP+
Sbjct: 192 GIPGDMGPRGAKGDKGDRGKPGE--TGSAPPRMKPIFAGPI 230
>SB_15585| Best HMM Match : Collagen (HMM E-Value=2.7e-12)
Length = 104
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
DTG GP+G G G KGD G G G G GP+G G
Sbjct: 53 DTGATGPAGPTGPTGPKGDTGATGPAGPTGPTGPKGDTG 91
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
DTG GP+G G G KGD G G G +G GA GP
Sbjct: 23 DTGATGPTGPTGPTGPKGDTG--ATGPTGPKGDTGATGP 59
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
+ G GP+ G KGD G G G G G +G GA GP
Sbjct: 8 EIGATGPTDPTGPKGDTGATGPTGPTGPTGPKGDTGATGP 47
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLP 276
DTG GP+G G G KGD G G +P
Sbjct: 71 DTGATGPAGPTGPTGPKGDTGATGPLIP 98
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
DTG GP+ G KGD G G G G G +G GA GP
Sbjct: 41 DTGATGPT---GPKGDTGATGPAGPTGPTGPKGDTGATGP 77
>SB_40963| Best HMM Match : Collagen (HMM E-Value=2.2e-09)
Length = 234
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
+ G+ GPSG G KG KG+ G GLPG +GP+G G
Sbjct: 41 ELGKVGPSGPQGRKGFKGEPGPP--GLPGEQGPQGKFG 76
>SB_17676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1271
Score = 38.3 bits (85), Expect = 0.007
Identities = 20/37 (54%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
GR GP G G G GDRG GV G G +G GAPG
Sbjct: 1028 GRSGPVGPPGPPGSPGDRGQTGVPGPVGPDGDIGAPG 1064
Score = 37.5 bits (83), Expect = 0.012
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 10/48 (20%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEG-------VGLPGTE---GPRGAPGP 243
+G GP G G+ GD+G GV G +G PG + GP+G PGP
Sbjct: 1030 SGPVGPPGPPGSPGDRGQTGVPGPVGPDGDIGAPGADGVPGPKGPPGP 1077
Score = 35.5 bits (78), Expect = 0.047
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
D G+ G G G GD G G +GV PG +GP G PG
Sbjct: 1044 DRGQTGVPGPVGPDGDIGAPGADGV--PGPKGPPGPPG 1079
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
D G PG G G KG G G G G GP+G PG
Sbjct: 1059 DIGAPGADGVPGPKGPPGPPGYPG--FKGYRGPQGPPG 1094
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGV-------GLPGTEGPRGAPGP 243
TG PGP G +G G G GV G G PG +G RG GP
Sbjct: 1048 TGVPGPVGPDGDIGAPGADGVPGPKGPPGPPGYPGFKGYRGPQGP 1092
>SB_51822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 741
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G G G G KGDKGD G G G PG +G +G G
Sbjct: 696 GPKGLKGDPGLKGDKGDTGANGTAGAPGVKGDKGDTG 732
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G NG++G G +G++G GL G +G GA G
Sbjct: 681 GPQGPRGFNGSEGPVGPKGLKGDPGLKGDKGDTGANG 717
Score = 34.7 bits (76), Expect = 0.082
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG 288
DTG G +G+ G KGDKGD G G
Sbjct: 712 DTGANGTAGAPGVKGDKGDTGASG 735
>SB_38206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G G G+KGD+G+ GV G GP+G G
Sbjct: 125 GSQGPPGKRGPPGEKGDQGIPGV--KGDVGPKGEKG 158
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRG 297
D G PG G G KG+KGD G
Sbjct: 141 DQGIPGVKGDVGPKGEKGDSG 161
>SB_29692| Best HMM Match : ig (HMM E-Value=5.4e-12)
Length = 567
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -2
Query: 335 GSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G+ G KGD+G+RG +G G G GP+G PGP
Sbjct: 245 GAVGQKGDRGERGPQGPPGPKGPIGPKGEPGP 276
>SB_22107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
GR GP G G G +G +G EG G +GP+G PGP
Sbjct: 67 GRRGPVGPPGVPGPRGMQGEEGPA--GNKGPQGDPGP 101
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG 288
G GP+G+ G +GD G +EG
Sbjct: 85 GEEGPAGNKGPQGDPGPAAMEG 106
>SB_6568| Best HMM Match : Collagen (HMM E-Value=6.4e-10)
Length = 106
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G PG G G G +GD G +G G G GP G+PG
Sbjct: 37 GTPGDQGRQGVPGKRGDDGAKGREGEDGANGPPGSPG 73
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGT 270
G PG G +GAKG +G+ G G G PG+
Sbjct: 46 GVPGKRGDDGAKGREGEDGANGPPGSPGS 74
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKG------DRGVEGVGLPGTEGPRGAPG 246
G PGP G +G G KG D+G +GV PG G GA G
Sbjct: 19 GFPGPMGLDGIPGLKGFPGTPGDQGRQGV--PGKRGDDGAKG 58
>SB_53873| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 660
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVG 282
G GP G G +G+KGDRG+ GVG
Sbjct: 128 GPQGPKGDPGVRGEKGDRGIPGVG 151
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEG 264
G PGP G G KGD G RG +G G+PG G
Sbjct: 122 GPPGPPGPQGPKGDPGVRGEKGDRGIPGVGG 152
>SB_23055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PGP G +G G G G+ GV G +GP G PG
Sbjct: 134 GHPGPPGPSGPPGRNGLNGIPGVS--GKQGPPGPPG 167
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV----GLPGTEGPRGAPGPV 240
G PGP G G +G G+ G G G G GPRG GP+
Sbjct: 161 GPPGPPGKRGRRGHPGEPGRNGTHGSPGWRGKTGPRGPMGPI 202
Score = 36.7 bits (81), Expect = 0.020
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
+ GR G GS G +G G RG G +G PGT G G PG
Sbjct: 177 EPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPGVPGQPG 215
Score = 34.7 bits (76), Expect = 0.082
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PG G G G G G+ G+ PG G +G PGP
Sbjct: 131 GIPGHPGPPGPSGPPGRNGLNGI--PGVSGKQGPPGP 165
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG G NG G G RG G G G GP G PG
Sbjct: 173 GHPGEPGRNGTHGSPGWRGKTGPRGPMGPIGPPGTPG 209
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PG G G +G G G G G+PG G G+PG
Sbjct: 185 GSPGWRGKTGPRGPMGPIGPPGTPGVPGQPGKAGSPG 221
>SB_2570| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 230
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG G +G G G G +G G PG GP+G PGP
Sbjct: 38 GIPGIPGVHGKPGTPGKSGNDGRNGKPGAPGPKGPPGP 75
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG SG++G G G G +G G G+ GP+G GP
Sbjct: 50 GTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGP 87
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGT 270
G PGP G G KG +G +GV+G PGT
Sbjct: 65 GAPGPKGPPGPKGSRGPKGVQGP--PGT 90
>SB_7441| Best HMM Match : Collagen (HMM E-Value=0.05)
Length = 510
Score = 36.7 bits (81), Expect = 0.020
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
GP G G K DKGD+G++GV G +G +GA G
Sbjct: 347 GPKGDKGDKDDKGDQGMQGVKDEKGDKGDQGAQG 380
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV 285
D G G G KGDKGD+G +GV
Sbjct: 357 DKGDQGMQGVKDEKGDKGDQGAQGV 381
>SB_54530| Best HMM Match : Collagen (HMM E-Value=1.9e-18)
Length = 427
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
D G PG G G +G G +G +G G PG GP GA G
Sbjct: 261 DRGVPGRQGMYGLRGPPGRKGDQGTRGPPGLNGPTGAQG 299
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 335 GSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
GS G G GD G+ G G PG +GP+G G
Sbjct: 208 GSKGTPGAPGDPGLYGPPGPPGKKGPKGPKG 238
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGT 270
G PG G +GAKG +G+ G G G PG+
Sbjct: 147 GVPGKRGYDGAKGREGEDGANGPPGSPGS 175
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKG------DRGVEGVGLPGTEGPRGAPG 246
G PGP G +G G KG D+G +GV PG G GA G
Sbjct: 120 GFPGPMGLDGIPGLKGFPGTPGDQGRQGV--PGKRGYDGAKG 159
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = -2
Query: 317 GDKGDRGVEG-VGLPGTEGPRGAPG 246
G KGDRGV G G+ G GP G G
Sbjct: 257 GPKGDRGVPGRQGMYGLRGPPGRKG 281
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG 288
D G GP G NG G +GD G G
Sbjct: 282 DQGTRGPPGLNGPTGAQGDSGFPG 305
>SB_21937| Best HMM Match : Collagen (HMM E-Value=4.3e-07)
Length = 232
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG G G G G G +G G PG GP+G PGP
Sbjct: 38 GIPGDPGVPGQLGTPGKSGNDGRNGKPGAPGPKGPPGP 75
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG SG++G G G G +G G G+ GP+G GP
Sbjct: 50 GTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGP 87
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGT 270
G PGP G G KG +G +GV+G PGT
Sbjct: 65 GAPGPKGPPGPKGSRGPKGVQGP--PGT 90
>SB_21936| Best HMM Match : Collagen (HMM E-Value=1.1e-07)
Length = 195
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG SG++G G G G +G G G+ GP+G GP
Sbjct: 50 GTPGKSGNDGRNGKPGAPGPKGPPGPKGSRGPKGVQGP 87
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG G G G G G +G G PG GP+G PGP
Sbjct: 38 GIPGIPGVPGKPGTPGKSGNDGRNGKPGAPGPKGPPGP 75
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGT 270
G PGP G G KG +G +GV+G PGT
Sbjct: 65 GAPGPKGPPGPKGSRGPKGVQGP--PGT 90
>SB_40962| Best HMM Match : COLFI (HMM E-Value=1.4013e-45)
Length = 577
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G PG G G KG GDRG +G G +G RGA GP+
Sbjct: 257 GSPGDIGYVGPKGKLGDRGPQGP--VGIKGIRGASGPI 292
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
D G GP G GA G+ G +G PG G G PGP+
Sbjct: 33 DRGEQGPFGPKGAGGEMGSKGP-----PGVPGEVGKPGPI 67
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
+TG G G G G +GD G+ G G G GP G GP
Sbjct: 207 ETGPIGGQGLEGRTGVQGDDGIRGPQGKQGGVGPTGGHGP 246
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 35.9 bits (79), Expect = 0.036
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G PG +G+ G +G +G G G+ G PG G +G PGP
Sbjct: 538 GIPGLNGTVGPRGPQGFSGPRGLQGTPGQNGLQGPPGP 575
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G PGP G KG G++G GLPG +GP G G
Sbjct: 493 GPPGPPGLCNVDVCKGTPGIQGPQGLPGKQGPAGPQG 529
>SB_58049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 443
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G G G GA G +G G++G+ G PG GP+G PG
Sbjct: 262 GTSGAPGFPGAPGFQGPPGLDGMPGAPGMPGPQGYPG 298
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGPV 240
G PGP G G G G G G+PG GP G P P+
Sbjct: 289 GMPGPQGYPGGSGAPGIPG--SPGMPGPPGPAG-PTPI 323
>SB_13861| Best HMM Match : Collagen (HMM E-Value=0.00048)
Length = 763
Score = 35.5 bits (78), Expect = 0.047
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPG 246
PGP G G +G G +GV G +G G+ GP+G PG
Sbjct: 176 PGPQGPPGPQGLPGPQGVPGPAGDIGPSGSSGPQGPPG 213
>SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGPV 240
G PGP G G G +G RG++G G+ G G G PG +
Sbjct: 167 GDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRI 208
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRG 255
D+G G G G KGD+G+RG G G +G G
Sbjct: 222 DSGMKGDDGKIGQKGDRGERG--ETGFKGEKGDAG 254
>SB_38167| Best HMM Match : Collagen (HMM E-Value=7e-12)
Length = 299
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
GP G+ G G KGD+G G G G GP G PG
Sbjct: 134 GPPGNQGPPGPKGDKGRPGKRGRRGPAGPPGQPG 167
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG 288
G PG G G KGD G RG++G
Sbjct: 176 GPPGIKGERGPKGDVGPRGLKG 197
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPG--TEGPRGAPGP 243
G GP G G +G KGD G G+ G PG PR P
Sbjct: 173 GIRGPPGIKGERGPKGDVGPRGLKGEPGRIRNAPRAEISP 212
>SB_16976| Best HMM Match : Collagen (HMM E-Value=4.1e-11)
Length = 111
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG----VGLPGTEGPRGAPGPV 240
G PGP G G G +G RG++G G+ G G G PG +
Sbjct: 45 GDPGPPGPPGIMGRRGPRGIQGRKGNRGVQGIPGSHGIPGRI 86
>SB_21141| Best HMM Match : Collagen (HMM E-Value=0.01)
Length = 738
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PG +G++G G GD +G PG G RG PGP
Sbjct: 603 GLPGVNGTSGPPGPPGD-----MGPPGLNGTRGPPGP 634
>SB_12795| Best HMM Match : Collagen (HMM E-Value=0.04)
Length = 181
Score = 34.7 bits (76), Expect = 0.082
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV 285
G GP G G +G+KGDRG+ GV
Sbjct: 128 GPQGPKGDPGVRGEKGDRGIPGV 150
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPG 273
G PGP G G KGD G RG +G G+PG
Sbjct: 122 GPPGPPGPQGPKGDPGVRGEKGDRGIPG 149
>SB_20512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
PG G+ GA+G KG+ G+ G PG GPR G
Sbjct: 241 PGAKGAQGAQGPKGNPGLR--GRPGATGPRPTVG 272
>SB_5177| Best HMM Match : C4 (HMM E-Value=1.4e-32)
Length = 176
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG G G KG +G G +GV PG GP G PG
Sbjct: 24 GPPGKPGLPGNKGKEGLPGDDGV--PGQPGPPGPPG 57
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
GP G G G+KG G LPG +G G PGP
Sbjct: 24 GPPGKPGLPGNKGKEG-----LPGDDGVPGQPGP 52
>SB_55853| Best HMM Match : Collagen (HMM E-Value=0.0035)
Length = 453
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 338 SGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
+G+ G +G +G G+ G G+PG +GP+G GP
Sbjct: 222 NGTRGPQGIQGPMGMNGSKGVPGPQGPQGLEGP 254
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGA 252
G GP G NG+KG G +G +G+ EGP GA
Sbjct: 229 GIQGPMGMNGSKGVPGPQGPQGL-----EGPPGA 257
>SB_10732| Best HMM Match : Collagen (HMM E-Value=0.029)
Length = 367
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -2
Query: 335 GSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
G G K DKGD+G++GV G G +G +GA G
Sbjct: 105 GEKGDKCDKGDQGIQGVKGDKGDKGDQGAQG 135
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV 285
D G G G G KGDKGD+G +GV
Sbjct: 112 DKGDQGIQGVKGDKGDKGDQGAQGV 136
>SB_39066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 329 NGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
+G KGD+GD G G G PG G RG GP
Sbjct: 255 DGQKGDRGDMGPPGHPGPPGVRGRRGKRGP 284
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 350 RPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
RP P G +G G G+ G GLPG +G G PG
Sbjct: 117 RPVPLCPQGPQGLPGRDGLPGKAGLPGRDGAMGPPG 152
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPG-TEGPRGAPGP 243
G PGP G G +G +G G G G T P P P
Sbjct: 268 GHPGPPGVRGRRGKRGPPGPPGPPNGGATPHPGAMPTP 305
>SB_31893| Best HMM Match : I-set (HMM E-Value=2e-22)
Length = 767
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGV-GLPGT 270
G PGP G G +G +G RG G GLPGT
Sbjct: 230 GSPGPRGPRGLRGYRGARGHTGPRGLPGT 258
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPG 246
+ GR G+ G +G RG+ G G G GPRG PG
Sbjct: 219 EAGRTQVIAIVGSPGPRGPRGLRGYRGARGHTGPRGLPG 257
>SB_58047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G PGP G G G G G PG GP G PGP
Sbjct: 189 GPPGPPGP-GLVGSGSGAGAVIAGPPGPPGPPGPPGP 224
>SB_55338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRG 255
GRPGP G G +GD G G +G+ GP+G
Sbjct: 351 GRPGPQGKMGPQGDPGPAGKDGL-----RGPKG 378
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG-VGLPGTEGPRGAPG 246
G GP G NG+ G +G G EG G G +GP G G
Sbjct: 419 GPMGPRGYNGSIGPQGLAGAEGHNGTQGIQGPMGVNG 455
>SB_26832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -2
Query: 353 GRPGPSGSN--GAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PGPSG G G G + G PG GPRG PG
Sbjct: 483 GPPGPSGRYVPGPPGPPGRTVIGLPGPPGPAGPRGIPG 520
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 335 GSNGAKGDKGDRGVEG-VGLPGTEGPRGAPGP 243
G G +G +GDRG G G PG G R PGP
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSG-RYVPGP 495
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G G +G G G G GP G PG
Sbjct: 465 GGRGPQGVRGDRGPPGPAGPPGPSGRYVPGPPGPPG 500
>SB_4257| Best HMM Match : Collagen (HMM E-Value=0.00073)
Length = 863
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G GP G G G G R GLPG +GP+G G
Sbjct: 485 GAAGPKGDRGPAGPPGPR-----GLPGAQGPQGIQG 515
>SB_51503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = -2
Query: 353 GRPGPSGSNGAKGD---KGDRGVEG--VGLPGTEGPRGAPG 246
G PGP+ G KG+ KG++G++G PG G RG+ G
Sbjct: 21 GDPGPAAMEGNKGELGAKGEKGLQGNTPDQPGPPGRRGSAG 61
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/37 (48%), Positives = 19/37 (51%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
TG PG G N G+ G G G GLPG G G PG
Sbjct: 132 TGVPGFPGINAIPGEGGLPG--GNGLPGNPGDPGRPG 166
>SB_22116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 36
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
G PG +G G G+KG RG PG GP G PG
Sbjct: 1 GIPGRAGDAGKPGEKGSRGP-----PGPAGPIGNPG 31
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGP 261
D G+PG GS G G G +G PG GP
Sbjct: 8 DAGKPGEKGSRGPPGPAGP-----IGNPGKPGP 35
>SB_15780| Best HMM Match : Collagen (HMM E-Value=6e-06)
Length = 88
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEG 288
G PGP G+ G G+KGD G G
Sbjct: 28 GAPGPKGTGGFPGEKGDEGPRG 49
>SB_19164| Best HMM Match : Collagen (HMM E-Value=0.0024)
Length = 60
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
GRPGP G +G G + G+PG GP G PG
Sbjct: 26 GRPGPPGRHGFPGQR--------GMPGGTGPPGPPG 53
>SB_56576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 658
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGV 285
G G G KGDKGD+G +GV
Sbjct: 105 GQKGDKGDKGDKGDQGAQGV 124
>SB_59546| Best HMM Match : Collagen (HMM E-Value=0.003)
Length = 157
Score = 31.5 bits (68), Expect = 0.76
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 335 GSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
G G +G+ G +GV G G+ G EGP G GP
Sbjct: 1 GPQGIQGNPGYQGVPGPRGMQGEEGPAGNKGP 32
>SB_25393| Best HMM Match : Collagen (HMM E-Value=0.00015)
Length = 391
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
G GP G G G G R + G PG GP G GP
Sbjct: 93 GPTGPPGEYGYNGFPGSRHGQS-GFPGLHGPPGPKGP 128
>SB_1528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2409
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 356 TGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPGP 243
TG+ G SG G G GD G+ G+G T PR P
Sbjct: 1802 TGKTGMSGKTGMSGVTGDSGMSGMGRRHT--PRRPTSP 1837
>SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1357
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG 288
D G G G NG +GD GD G +G
Sbjct: 822 DEGDDGDEGDNGDEGDDGDEGDDG 845
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEG 288
D G G G G GD+GD G EG
Sbjct: 819 DDGDEGDDGDEGDNGDEGDDGDEG 842
>SB_38285| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 204
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 341 PSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
P G G G +G++G+ G PG GP+G+ GP
Sbjct: 167 PCVLQGPMGAPGVQGIQGMRGPPGPPGPQGSLGP 200
>SB_31101| Best HMM Match : Collagen (HMM E-Value=0.14)
Length = 417
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 326 GAKGDKGDRGVEGV-GLPGTEGPRG 255
G +G KG+RG+ G G PG G RG
Sbjct: 254 GLQGPKGERGLPGASGAPGARGDRG 278
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD 303
+ G PG SG+ GA+GD+GD
Sbjct: 261 ERGLPGASGAPGARGDRGD 279
>SB_26842| Best HMM Match : Collagen (HMM E-Value=0.031)
Length = 186
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 341 PSGSNGAKGDKGDRGVEGV-GLPGTEGPRGAPGP 243
P G G G +G++G+ G PG GP+G+ GP
Sbjct: 149 PCVLQGPMGAPGVQGIQGMRGPPGPPGPQGSLGP 182
>SB_11354| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 116
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD 303
+ G PG SG+ GA+GD+GD
Sbjct: 48 ERGPPGASGAPGARGDRGD 66
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRG 297
G GP G++GA G +GDRG
Sbjct: 47 GERGPPGASGAPGARGDRG 65
>SB_31554| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 681
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 724 YRVLLDRRGCAERKGIQGYRVFQGGMGLTEFQVYQG 617
Y V L +G + QGY V+Q G T +Q YQG
Sbjct: 262 YTVYLAYQGYTLYRPYQGYTVYQPYQGYTVYQPYQG 297
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 724 YRVLLDRRGCAERKGIQGYRVFQGGMGLTEFQVYQG 617
Y V +G + QGY V+Q G T +Q+YQG
Sbjct: 325 YTVYQPYQGYTVYRPYQGYTVYQPYQGYTVYQLYQG 360
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 724 YRVLLDRRGCAERKGIQGYRVFQGGMGLTEFQVYQG 617
Y V +G + QGY VFQ G T +Q YQG
Sbjct: 183 YTVYQPYQGFTVYRLYQGYTVFQPYQGYTVYQPYQG 218
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 724 YRVLLDRRGCAERKGIQGYRVFQGGMGLTEFQVYQG 617
Y V +G + QGY VFQ G T +Q YQG
Sbjct: 496 YTVYQPYQGYTVYRLYQGYTVFQPYQGYTVYQPYQG 531
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 724 YRVLLDRRGCAERKGIQGYRVFQGGMGLTEFQVYQG 617
Y V +G + QGY V+Q G T +Q YQG
Sbjct: 120 YTVYRPYQGYTVYRPYQGYTVYQPYQGYTVYQPYQG 155
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 724 YRVLLDRRGCAERKGIQGYRVFQGGMGLTEFQVYQG 617
Y V +G + QGY V+Q G T +Q YQG
Sbjct: 433 YTVYQPYQGYTVYRPYQGYTVYQPYQGYTVYQPYQG 468
>SB_10146| Best HMM Match : Collagen (HMM E-Value=0.09)
Length = 536
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGD 303
+ G PG SG+ GA+GD+GD
Sbjct: 196 ERGPPGASGAPGARGDRGD 214
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 353 GRPGPSGSNGAKGDKGDRG 297
G GP G++GA G +GDRG
Sbjct: 195 GERGPPGASGAPGARGDRG 213
>SB_6541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 105 SLWVAVVGYGTITNPPLSWRSARSYRPFSTRISS 206
++WVA G+G I PPL W+ +R R R+SS
Sbjct: 5 AIWVAR-GFGRI--PPLDWKXSRQVRQHPWRLSS 35
>SB_39689| Best HMM Match : S-antigen (HMM E-Value=0.021)
Length = 465
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR--GAPGP 243
D G GP G KG + D+G +G GT+GPR G GP
Sbjct: 267 DQGTKGPR-DQGTKGPR-DQGTKGPRDQGTKGPRDQGTKGP 305
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR--GAPGP 243
D G GP G KG + D+G +G GT+GPR G GP
Sbjct: 275 DQGTKGPR-DQGTKGPR-DQGTKGPRDQGTKGPRDQGTKGP 313
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR--GAPGP 243
D G GP G KG + D+G +G GT+GPR G GP
Sbjct: 283 DQGTKGPR-DQGTKGPR-DQGTKGPRDQGTKGPRDQGTKGP 321
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR--GAPGP 243
D G GP G KG + D+G +G GT+GPR G GP
Sbjct: 291 DQGTKGPR-DQGTKGPR-DQGTKGPRDQGTKGPRDQGTKGP 329
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR--GAPGP 243
D G GP G KG + D+G +G GT+GPR G GP
Sbjct: 299 DQGTKGPR-DQGTKGPR-DQGTKGPRDQGTKGPRDQGTKGP 337
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 359 DTGRPGPSGSNGAKGDKGDRGVEGVGLPGTEGPR--GAPGP 243
D G GP G KG + D+G +G GT+GPR G GP
Sbjct: 307 DQGTKGPR-DQGTKGPR-DQGTKGPRDQGTKGPRDQGTKGP 345
>SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGVGLPGTEG 264
G GSNG++ + ++ V+G P TEG
Sbjct: 184 GQMGSNGSQAENDEQRVDGSAKPSTEG 210
>SB_57200| Best HMM Match : Plasmodium_HRP (HMM E-Value=4.7)
Length = 346
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -1
Query: 738 HCSQYTGSS--WTGGGARRERGSRVTGSSRAGWA*RNSRYTRACWPARGSRSQHRLSTNT 565
HC QY+ + W R + T SRA A N++Y+RA S+ ++TNT
Sbjct: 88 HCHQYSVRALPWPPIQCSRATMASNTKYSRATMA-TNTKYSRATMATNRKYSRANMATNT 146
Query: 564 V 562
V
Sbjct: 147 V 147
>SB_54575| Best HMM Match : S10_plectin (HMM E-Value=0)
Length = 166
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Frame = -2
Query: 359 DTGRPGPSGSNGAK--GDKGDRGVEGVGL---PGTEGPRGA 252
+T RP P G +G + G+ GDR E PG EG GA
Sbjct: 100 ETARPRPKGMDGPRGPGEGGDRDRESYRRGPPPGVEGKGGA 140
>SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82)
Length = 883
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 531 RKHRQRTTERAISKSNGTHPDRGYKAW 451
R+ R+ T R S+G HP R AW
Sbjct: 307 RRRRENKTRRQDRDSHGRHPGRARNAW 333
>SB_45446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/48 (25%), Positives = 18/48 (37%)
Frame = -1
Query: 513 TTERAISKSNGTHPDRGYKAWPSRKTWSSWASGCPRGIRRAWSTWVPW 370
T R + RG+ ++ SW +G + AWS W W
Sbjct: 354 TPARCVDSIRARLLSRGFSFGATKIICQSWTTGTGKQYDGAWSKWESW 401
>SB_44202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/49 (26%), Positives = 17/49 (34%)
Frame = -1
Query: 516 RTTERAISKSNGTHPDRGYKAWPSRKTWSSWASGCPRGIRRAWSTWVPW 370
RT R + RG+ S+ SW + AWS W W
Sbjct: 227 RTPARRVDSIRACLLSRGFSLGASKIICQSWTKKTGKQYDSAWSKWESW 275
>SB_17470| Best HMM Match : HC2 (HMM E-Value=2.8)
Length = 464
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -1
Query: 738 HCSQYTGSS--WTGGGARRERGSRVTGSSRAGWA*RNSRYTRACWPARGSRSQHRLSTNT 565
HC QY+ + W R + T SRA A N++Y+RA S+ ++TNT
Sbjct: 88 HCHQYSVRALPWPPIQCSRATMASNTKYSRATMA-TNTKYSRATMATNRKYSRANMATNT 146
Query: 564 V 562
V
Sbjct: 147 V 147
Score = 27.9 bits (59), Expect = 9.4
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -1
Query: 738 HCSQYTGSS--WTGGGARRERGSRVTGSSRAGWA*RNSRYTRACWPARGSRSQHRLSTNT 565
HC QY+ + W R + T SRA A N++Y+RA S+ ++TNT
Sbjct: 327 HCHQYSVRALPWPPIQCSRATMASNTKYSRATMA-TNTKYSRATMATNRKYSRANMATNT 385
Query: 564 V 562
V
Sbjct: 386 V 386
>SB_53352| Best HMM Match : Collagen (HMM E-Value=0.11)
Length = 348
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 344 GPSGSNGAKGDKGDRGVEGVGLPGTEGPRGA 252
GP G NG++G G +G +G G GPR A
Sbjct: 232 GPHGFNGSRGPPGIQGPQGE--RGPMGPRAA 260
>SB_23541| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 957
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -2
Query: 347 PGPSGSNGAKGDKGDRGVEGVGLPGTEGPRGAPG 246
PGPS G + D G G+P P APG
Sbjct: 838 PGPSEPQGLRADDAASGTASAGMPSAHTP--APG 869
>SB_13206| Best HMM Match : Extensin_2 (HMM E-Value=0.031)
Length = 1099
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 284 LLPQHPYLLYRP--LRHYFPMVPVSPYHLVL 370
L+ HP+L++RP + HY P + +S H V+
Sbjct: 1026 LIHHHPWLIHRPAIVHHYGPNLMISHSHHVI 1056
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,664,923
Number of Sequences: 59808
Number of extensions: 460025
Number of successful extensions: 2883
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 1569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2466
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -