Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a03f
(637 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB7127 Cluster: PREDICTED: similar to Collagen a... 85 1e-15
UniRef50_UPI0000E4A0B0 Cluster: PREDICTED: similar to procollage... 72 1e-11
UniRef50_Q7Q1W5 Cluster: ENSANGP00000020977; n=1; Anopheles gamb... 62 8e-09
UniRef50_Q4S052 Cluster: Chromosome 21 SCAF14785, whole genome s... 59 8e-08
UniRef50_P20849 Cluster: Collagen alpha-1(IX) chain precursor; n... 59 1e-07
UniRef50_UPI0000F20786 Cluster: PREDICTED: hypothetical protein,... 56 5e-07
UniRef50_Q07092 Cluster: Collagen alpha-1(XVI) chain precursor; ... 55 2e-06
UniRef50_Q4RP14 Cluster: Chromosome 10 SCAF15009, whole genome s... 48 2e-04
UniRef50_Q4S053 Cluster: Chromosome 21 SCAF14785, whole genome s... 48 2e-04
UniRef50_UPI0000F20056 Cluster: PREDICTED: similar to gag-pol fu... 45 0.001
UniRef50_UPI0000E801E7 Cluster: PREDICTED: similar to alpha 1 ty... 44 0.002
UniRef50_Q99715 Cluster: Collagen alpha-1(XII) chain precursor; ... 44 0.002
UniRef50_UPI0000F2075E Cluster: PREDICTED: hypothetical protein;... 44 0.004
UniRef50_UPI00006A0426 Cluster: Collagen alpha-1(XIV) chain prec... 42 0.009
UniRef50_Q4RQA8 Cluster: Chromosome 17 SCAF15006, whole genome s... 42 0.009
UniRef50_Q8C4S5 Cluster: 16 days embryo head cDNA, RIKEN full-le... 42 0.009
UniRef50_Q66S51 Cluster: Collagen repeat-containing protein; n=1... 42 0.009
UniRef50_P12107 Cluster: Collagen alpha-1(XI) chain precursor; n... 42 0.009
UniRef50_UPI00006600F1 Cluster: Collagen alpha-1(XIV) chain prec... 42 0.012
UniRef50_Q05707 Cluster: Collagen alpha-1(XIV) chain precursor; ... 42 0.016
UniRef50_Q4RWT3 Cluster: Chromosome 15 SCAF14981, whole genome s... 41 0.029
UniRef50_Q08BP6 Cluster: Zgc:153049; n=2; Danio rerio|Rep: Zgc:1... 40 0.038
UniRef50_Q14993 Cluster: Collagen alpha-1(XIX) chain precursor (... 40 0.038
UniRef50_UPI000065E422 Cluster: Collagen alpha-1(XI) chain precu... 40 0.050
UniRef50_Q4SH63 Cluster: Chromosome 8 SCAF14587, whole genome sh... 40 0.050
UniRef50_UPI0000DBF905 Cluster: UPI0000DBF905 related cluster; n... 40 0.066
UniRef50_UPI0000DBF903 Cluster: UPI0000DBF903 related cluster; n... 39 0.088
UniRef50_UPI00015A783F Cluster: LOC553362 protein; n=1; Danio re... 38 0.20
UniRef50_Q8NFW1 Cluster: Collagen alpha-1(XXII) chain; n=23; Eut... 37 0.35
UniRef50_UPI000065D67A Cluster: Collagen alpha-1(XIV) chain prec... 37 0.47
UniRef50_P25940 Cluster: Collagen alpha-3(V) chain precursor; n=... 36 0.82
UniRef50_UPI0000F1F770 Cluster: PREDICTED: similar to collagen, ... 36 1.1
UniRef50_UPI000069F8A6 Cluster: Collagen alpha-1(XII) chain prec... 35 1.4
UniRef50_UPI000069F8A4 Cluster: Collagen alpha-1(XII) chain prec... 35 1.4
UniRef50_Q4SD21 Cluster: Chromosome 14 SCAF14645, whole genome s... 35 1.4
UniRef50_A7S1U8 Cluster: Predicted protein; n=1; Nematostella ve... 35 1.9
UniRef50_A3RYW5 Cluster: Co-activator of prophage gene expressio... 34 2.5
UniRef50_UPI0000F2130C Cluster: PREDICTED: hypothetical protein;... 33 4.4
UniRef50_UPI00006CD596 Cluster: hypothetical protein TTHERM_0051... 33 4.4
UniRef50_Q4SXE3 Cluster: Chromosome undetermined SCAF12445, whol... 33 4.4
UniRef50_Q4SMJ3 Cluster: Chromosome 18 SCAF14547, whole genome s... 33 4.4
UniRef50_Q4E0W9 Cluster: Putative uncharacterized protein; n=3; ... 33 4.4
UniRef50_Q17A79 Cluster: Collagen alpha chain, anopheles; n=7; C... 33 4.4
UniRef50_Q19350 Cluster: Drosophila crumbs homolog protein 1; n=... 33 5.8
UniRef50_UPI0000E48BC9 Cluster: PREDICTED: similar to alpha 1 (V... 33 7.6
UniRef50_Q7TBL9 Cluster: Pc2 protein; n=2; Tenuivirus|Rep: Pc2 p... 33 7.6
UniRef50_Q87W48 Cluster: Type III effector HopAA1-2; n=4; Pseudo... 33 7.6
UniRef50_A5K1Y1 Cluster: Transporter, putative; n=1; Plasmodium ... 33 7.6
>UniRef50_UPI0000DB7127 Cluster: PREDICTED: similar to Collagen
alpha-1(IX) chain precursor; n=1; Apis mellifera|Rep:
PREDICTED: similar to Collagen alpha-1(IX) chain
precursor - Apis mellifera
Length = 884
Score = 85.4 bits (202), Expect = 1e-15
Identities = 56/182 (30%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Frame = +3
Query: 90 VLVFLSILFS-YSNGQADNFTTMAPFARSFCSPNSK-DSDFQTVALIAVYRLDRSDT--T 257
V +FL + F+ Y G+ T+ F C + + D QT+ I+ +LD +T T
Sbjct: 5 VWIFLFVQFTQYIFGEE----TIPDFVHGPCEGYKQGEDDLQTIDFISKLKLDLLETHYT 60
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARG-QRRPWSLLRA 434
GVT V+GS +Q AYR+ ++TLP K +FP GLP FSV TF AR + W +++
Sbjct: 61 GVTRVRGSNRMQTAYRLEKDTDITLPTKNIFPNGLPEEFSVVCTFRARKLSKYTWHIIKI 120
Query: 435 --RSNNVLFSLILMPEPRKVAVLVQGSR---AVFKSPELFTTGWHKLHVAVANRSVHIAV 599
N F + + P+ + + + V+ F + +F WHK+ + + I +
Sbjct: 121 VDMENEPQFLIAMNPKGQTLDLFVKSDEMQIVSFSADHIFDKNWHKIDIGAFKDRLVIYI 180
Query: 600 DC 605
DC
Sbjct: 181 DC 182
>UniRef50_UPI0000E4A0B0 Cluster: PREDICTED: similar to procollagen,
type IX, alpha 1, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to procollagen, type
IX, alpha 1, partial - Strongylocentrotus purpuratus
Length = 993
Score = 72.1 bits (169), Expect = 1e-11
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 11/155 (7%)
Frame = +3
Query: 192 KDSDFQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNR 371
+++D +I ++ LD + GV +V GS D+Q AYR+ +++ P FP GLP+
Sbjct: 157 EENDLPGWDIIRMFELDSATIQGVRVVTGSDDVQRAYRLLKNHDISEPASNQFPQGLPDE 216
Query: 372 FSVEGTF---NARGQRRPW--SLLRARSNNVLFSLILMPEPRKVAVLVQGSRAVFKSPE- 533
FS TF + G W L+R R+ + LM E + + + ++
Sbjct: 217 FSFVSTFKLTDRTGDDEDWWLWLIRDRAGTPQIGIRLMGEEKALQFIYVNELGQLENVRF 276
Query: 534 -----LFTTGWHKLHVAVANRSVHIAVDCVELNPV 623
LF WHKLH+AV+ + + VDC+ + V
Sbjct: 277 DNAMMLFDRNWHKLHMAVSKNRLDLFVDCLSIGSV 311
>UniRef50_Q7Q1W5 Cluster: ENSANGP00000020977; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000020977 - Anopheles gambiae
str. PEST
Length = 438
Score = 62.5 bits (145), Expect = 8e-09
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Frame = +3
Query: 195 DSDFQTVALIAVYRLDRSDTTGVTL--VQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPN 368
D D ++ LI +RLD+ + + + +QG+ + Q AYR ANLT+ + FP GLP+
Sbjct: 37 DVDLRSFDLIREFRLDQIEASSKHMHRLQGTNEYQTAYRFEKEANLTMRSVDAFPLGLPH 96
Query: 369 RFSVEGTFNARGQ-RRPWSLLRARSNNVLFSLILMPEP-RKVAVL----VQGSRAV--FK 524
+FS E T+ + W L + L + P R++ + +G + + +
Sbjct: 97 QFSFECTYRIEDEGESSWHLFEVTNEVQESQLAITLNPGRQILQIGLPATEGEQQIVEYH 156
Query: 525 SPELFTTGWHKLHVAVANRSVHIAVDC 605
LF WHK+ + V N +++ VDC
Sbjct: 157 HTTLFDHNWHKIMLGVTNDYLNLWVDC 183
>UniRef50_Q4S052 Cluster: Chromosome 21 SCAF14785, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 21
SCAF14785, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 825
Score = 59.3 bits (137), Expect = 8e-08
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Frame = +3
Query: 171 SFCSP-NSKDSDFQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEV 347
S C P S D LI ++LD GV V GS LQ+AYR+ AN +P
Sbjct: 3 SVCPPLRSGQDDLPGFDLITQFQLDVIPLKGVRKVDGSTSLQVAYRLDREANFQIPTMLN 62
Query: 348 FPGGLPNRFSVEGTFN--ARGQRRPWSL--LRARSNNVLFSLILMPEPRKVAVLV---QG 506
FP G P+ +S TF + W++ + N L L + + + + G
Sbjct: 63 FPRGFPDEYSFMVTFRMIKNTVNKVWNVWQIMDEEGNKQAGLRLNGDQQALEYFLIDADG 122
Query: 507 SRAVFKSP---ELFTTGWHKLHVAVANRSVHIAVDC--VELNPV 623
+ P LF T WHK+ + V V + VDC V++ P+
Sbjct: 123 NLQTVTFPGLSVLFNTRWHKVMIGVERNQVTLYVDCQPVDMRPI 166
>UniRef50_P20849 Cluster: Collagen alpha-1(IX) chain precursor;
n=85; Euteleostomi|Rep: Collagen alpha-1(IX) chain
precursor - Homo sapiens (Human)
Length = 921
Score = 58.8 bits (136), Expect = 1e-07
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 219 LIAVYRLDRSDTT-GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN 395
LI+ +++D++ + + V GS LQ+AY++G + +P + ++P GLP +S TF
Sbjct: 59 LISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFR 118
Query: 396 ARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKS-PELFTT 545
G ++ W++ ++ S + + + + V +G A F + LF +
Sbjct: 119 MTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDS 178
Query: 546 GWHKLHVAVANRSVHIAVDCVELNPVNI 629
WHK+ + V S + VDC + + I
Sbjct: 179 QWHKIMIGVERSSATLFVDCNRIESLPI 206
>UniRef50_UPI0000F20786 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Danio rerio|Rep: PREDICTED: hypothetical
protein, partial - Danio rerio
Length = 372
Score = 56.4 bits (130), Expect = 5e-07
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 10/158 (6%)
Frame = +3
Query: 186 NSKDSDFQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLP 365
N +D D LI ++LD GV V+GS LQ+AYR+ AN +P + FP G P
Sbjct: 123 NGQD-DLPGFDLITQFQLDVIPMKGVRKVEGSTPLQVAYRLDREANFQIPTRLNFPRGFP 181
Query: 366 NRFSVEGTFN--ARGQRRPWSLLRARSNNVLFSLILMPEPRKVAV-----LVQGSRAVFK 524
+ +S TF + W+L + + L + + A+ ++G
Sbjct: 182 DEYSFMTTFRMIKNTVNKVWNLWQVVDEDGLKQAGMRLNGDQQALEFFLTTLEGDVQTVT 241
Query: 525 SP---ELFTTGWHKLHVAVANRSVHIAVDCVELNPVNI 629
P LF T WHK+ V V V + VDC +++ I
Sbjct: 242 FPGLSVLFNTKWHKVMVGVEKELVTLYVDCHQVDQKEI 279
>UniRef50_Q07092 Cluster: Collagen alpha-1(XVI) chain precursor;
n=38; cellular organisms|Rep: Collagen alpha-1(XVI)
chain precursor - Homo sapiens (Human)
Length = 1604
Score = 54.8 bits (126), Expect = 2e-06
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Frame = +3
Query: 228 VYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTF--NAR 401
++RL T+ + ++ + + R+G A +T P + VFP GLP F++ T
Sbjct: 54 IHRLSLMKTSAIKKIRNPKG-PLILRLGA-APVTQPTRRVFPRGLPEEFALVLTLLLKKH 111
Query: 402 GQRRPWSLLRARSNNVL--FSLILMPEPRKVAVLVQGS-----RAVFKSPELFTTGWHKL 560
++ W L + N SL + + R + + QG +F P+LF WHKL
Sbjct: 112 THQKTWYLFQVTDANGYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKL 171
Query: 561 HVAVANRSVHIAVDC 605
++VA R + VDC
Sbjct: 172 MLSVAGRVASVHVDC 186
>UniRef50_Q4RP14 Cluster: Chromosome 10 SCAF15009, whole genome
shotgun sequence; n=2; root|Rep: Chromosome 10 SCAF15009,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1450
Score = 48.0 bits (109), Expect = 2e-04
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN--ARGQRRPWSL-- 425
GV++ GS + +AYR+ + + P KE+ P GLP +++ F P+ +
Sbjct: 911 GVSMEPGSFNSYIAYRVHKDSFINQPTKEIHPEGLPPSYTIVLLFRLLPDSPSEPFDIWQ 970
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGSR-----AVFKSPE---LFTTGWHKLHVAVANR 581
+ ++NN + L P + + + +R A F + +F +HKLH+ V+
Sbjct: 971 ISDKNNNPEVGVSLNPSSKTITFYNKDTRGEIQKATFNQEQVKRIFHGSFHKLHITVSPD 1030
Query: 582 SVHIAVDCVEL 614
V I VDC E+
Sbjct: 1031 KVKINVDCQEV 1041
>UniRef50_Q4S053 Cluster: Chromosome 21 SCAF14785, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 21 SCAF14785, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1380
Score = 47.6 bits (108), Expect = 2e-04
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Frame = +3
Query: 285 DLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRARSNNVL-- 452
D Q +Y G + +++FP GLP+ ++ TF R +R W L + +
Sbjct: 237 DGQSSYVRLGTVPIVQQTEDIFPQGLPDEYAFVTTFKFRKTSRREDWYLWQVFDKYGIPQ 296
Query: 453 FSLILMPEPRKVAVLVQGS-----RAVFKSPE---LFTTGWHKLHVAVANRSVHIAVDCV 608
S+ L E + V G RAVFK+PE LF WHK+ ++V +SV + +DC
Sbjct: 297 VSIRLDGENKAVEYNAVGLTKDAVRAVFKNPEVDNLFDRSWHKIALSVEAKSVSLFLDCK 356
Query: 609 ELNPVNI 629
+ + I
Sbjct: 357 HIQTLPI 363
>UniRef50_UPI0000F20056 Cluster: PREDICTED: similar to gag-pol fusion
polyprotein; n=5; Danio rerio|Rep: PREDICTED: similar to
gag-pol fusion polyprotein - Danio rerio
Length = 2607
Score = 45.2 bits (102), Expect = 0.001
Identities = 34/156 (21%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Frame = +3
Query: 204 FQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVE 383
F+ + + + S GV++ G+ + YR+ A ++ P + + P GLP+ +++
Sbjct: 1988 FRMMEMFGLAEKHYSSVQGVSMEPGTFNSFPCYRLHKDALVSQPTRYLHPEGLPSDYTIS 2047
Query: 384 GTFNARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQGSRA-----VFKSPEL 536
F + + P++L + ++N L +IL + + + F+ PE+
Sbjct: 2048 MLFRILPETPQEPFALWEILDKNNEPLVGIILDNGGKTLTFFNSDYKGEFQTVTFEGPEI 2107
Query: 537 ---FTTGWHKLHVAVANRSVHIAVDCVELNPVNISA 635
F +HKLHVA++ + + +DC + +I+A
Sbjct: 2108 KKIFYGSFHKLHVAISKTAAKVVIDCKTVGEKSINA 2143
>UniRef50_UPI0000E801E7 Cluster: PREDICTED: similar to alpha 1 type
XIX collagen; n=1; Gallus gallus|Rep: PREDICTED: similar
to alpha 1 type XIX collagen - Gallus gallus
Length = 890
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRP-----WSLLRARSNNVLFSLILMPE 476
G A L ++VFP GLP +S+ TF R + W +L R + S++L
Sbjct: 81 GSAPLIRETRQVFPNGLPEEYSLVATFRIRRNTKKERWYIWQILNQRDIPEI-SVLLDGS 139
Query: 477 PRKVAVLVQGSRA-----VFKSPE---LFTTGWHKLHVAVANRSVHIAVDC 605
+ V + + ++ FKS E LF WHKL ++V + + + +DC
Sbjct: 140 KKVVEYMTKSAQGNILHYTFKSREIYPLFDRQWHKLGISVQSGIISLYLDC 190
>UniRef50_Q99715 Cluster: Collagen alpha-1(XII) chain precursor; n=68;
Euteleostomi|Rep: Collagen alpha-1(XII) chain precursor -
Homo sapiens (Human)
Length = 3063
Score = 44.4 bits (100), Expect = 0.002
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL-- 425
GV+L GS AYRI A + P ++ P GLP +++ F + P+++
Sbjct: 2539 GVSLESGSFPSYSAYRIQKNAFVNQPTADLHPNGLPPSYTIILLFRLLPETPSDPFAIWQ 2598
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGSR-----AVFKSPE---LFTTGWHKLHVAVANR 581
+ R +I P + ++ + +R F + E LF +HK+H+ V ++
Sbjct: 2599 ITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTEEVKTLFYGSFHKVHIVVTSK 2658
Query: 582 SVHIAVDCVEL 614
SV I +DC E+
Sbjct: 2659 SVKIYIDCYEI 2669
>UniRef50_UPI0000F2075E Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 753
Score = 43.6 bits (98), Expect = 0.004
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRARSNNVL--FSLILMPEP 479
G + ++V P GLP+ ++ TF R ++ W L + + S+ L E
Sbjct: 111 GALPIVQKTEDVLPQGLPDEYAFVTTFKFRKTSRKEDWYLWQVYDKYGIPQVSIRLDGEN 170
Query: 480 RKVAVLVQGS-----RAVFKSPE---LFTTGWHKLHVAVANRSVHIAVDCVELNPVNI 629
R V G RAVF++PE LF WHK+ + V ++SV + +DC + + I
Sbjct: 171 RAVEYNAVGLTKDAVRAVFRNPEVDNLFDRNWHKIGMRVDSKSVSLFLDCKHIETLPI 228
>UniRef50_UPI00006A0426 Cluster: Collagen alpha-1(XIV) chain precursor
(Undulin).; n=2; Xenopus tropicalis|Rep: Collagen
alpha-1(XIV) chain precursor (Undulin). - Xenopus
tropicalis
Length = 1105
Score = 42.3 bits (95), Expect = 0.009
Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Frame = +3
Query: 120 YSNGQADNFTTMAPFARSFCSPNSKD-SDFQTVALIAVYRLDRSDTTGVTLVQGSQDLQM 296
Y NG+ ++ + R+ C + + F+ + + + + S+ GV++ G+ +
Sbjct: 649 YFNGEGNSVSASG---RTHCPTATYNLPGFKMMEMFGLVEKEYSNMEGVSMEPGTFNNFP 705
Query: 297 AYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL--LRARSNNVLFSLI 464
YR+ A L+ P K + P GLP+ ++V F + P++L + + L +I
Sbjct: 706 CYRLHKDALLSQPTKYIHPEGLPSDYTVSFIFRILPDTPKEPFALWEILNKDYEPLVGVI 765
Query: 465 LMPEPRKVAVL-----VQGSRAVFKSPE---LFTTGWHKLHVAVANRSVHIAVDCVELNP 620
+ + + Q F+ PE +F +HK+H+ + + + +DC ++
Sbjct: 766 VDNGGKTLTYFNYDYKGQFQTITFEGPEVGKIFYGSFHKVHIVITKTTTRLVIDCKQVAE 825
Query: 621 VNISA 635
+I+A
Sbjct: 826 KSINA 830
>UniRef50_Q4RQA8 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 17
SCAF15006, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 250
Score = 42.3 bits (95), Expect = 0.009
Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 10/129 (7%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQR--RPWSLLR 431
GV V GS +AYR+ +L +V+P GLP+ FS+ TF + W L +
Sbjct: 36 GVQRVDGSGPAAVAYRLNPSIHLRRSTSDVYPDGLPSDFSIIATFKVTEDTAGKSWDLWQ 95
Query: 432 AR--SNNVLFSLILMPEPRKVAVLVQGSRA-----VFKSPE-LFTTGWHKLHVAVANRSV 587
L + R + F E +F WHKL ++V V
Sbjct: 96 VSDPEGKEQVGLRFHGDTRSLDFFYTSPHTRKMVRTFSGVERVFDGEWHKLALSVKADQV 155
Query: 588 HIAVDCVEL 614
+ +DC E+
Sbjct: 156 KLLIDCQEV 164
>UniRef50_Q8C4S5 Cluster: 16 days embryo head cDNA, RIKEN
full-length enriched library, clone:C130002K24
product:procollagen, type XI, alpha 1, full insert
sequence; n=7; Murinae|Rep: 16 days embryo head cDNA,
RIKEN full-length enriched library, clone:C130002K24
product:procollagen, type XI, alpha 1, full insert
sequence - Mus musculus (Mouse)
Length = 275
Score = 42.3 bits (95), Expect = 0.009
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGL-PNRFSVEGTFNARGQRRPW 419
S TTG T + S+D +AYR+ A ++ P K++FPGG+ P FS+ F + ++
Sbjct: 54 SKTTGFCTNRKNSKDPDVAYRVTEEAQISAPTKQLFPGGIFPQDFSI--LFTIKPKKGTQ 111
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQG--SRAVFKSPELFTT------GWHKLHVAVA 575
+ L + N + + R L + + ++ LF+T WH++ ++V
Sbjct: 112 AFLLSLYNEHGIQQLGVEVGRSPVFLFEDHTGKPTPENYPLFSTVNIADGKWHRVAISVE 171
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 172 KKTVTMIVDC 181
>UniRef50_Q66S51 Cluster: Collagen repeat-containing protein; n=1;
Oikopleura dioica|Rep: Collagen repeat-containing
protein - Oikopleura dioica (Tunicate)
Length = 1041
Score = 42.3 bits (95), Expect = 0.009
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 13/151 (8%)
Frame = +3
Query: 189 SKDSDFQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPN 368
++ D I+ + LDR GVT + GS D Q AYRI A+L V LP
Sbjct: 102 TQGGDIPAFDFISQFGLDREQLLGVTEIAGSTDRQRAYRISNDASLVNAQTPV----LPK 157
Query: 369 RFSVEGTFNARGQRR--PWSLLRARSNNVLFSLILMPEPRKVAVLVQGS------RAVFK 524
FS+ W L + +S+ + + V+ +V S + K
Sbjct: 158 EFSINCILRMPDYTTGLVWDLFKIYDGLAEYSVQINGRRQTVSFIVADSSGKVLINSELK 217
Query: 525 SPE-LFTTGWHKLHVAV----ANRSVHIAVD 602
+ E LF T WH+L + V ++SV + +D
Sbjct: 218 NAEALFNTEWHQLSLQVYGDRGDKSVGLFID 248
>UniRef50_P12107 Cluster: Collagen alpha-1(XI) chain precursor;
n=83; Euteleostomi|Rep: Collagen alpha-1(XI) chain
precursor - Homo sapiens (Human)
Length = 1806
Score = 42.3 bits (95), Expect = 0.009
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGG-LPNRFSVEGTFNARGQRRPW 419
S TTG T + S+ AYR+ A L+ P K++FPGG P FS+ F + ++
Sbjct: 55 SKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSI--LFTVKPKKGIQ 112
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQ---GSRA-----VFKSPELFTTGWHKLHVAVA 575
S L + N I + R L + G A +F++ + WH++ ++V
Sbjct: 113 SFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVE 172
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 173 KKTVTMIVDC 182
>UniRef50_UPI00006600F1 Cluster: Collagen alpha-1(XIV) chain precursor
(Undulin).; n=2; Clupeocephala|Rep: Collagen alpha-1(XIV)
chain precursor (Undulin). - Takifugu rubripes
Length = 1776
Score = 41.9 bits (94), Expect = 0.012
Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Frame = +3
Query: 186 NSKDSDFQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLP 365
+S F+ + L + S +GV++V G+ + + + A L P + + P GLP
Sbjct: 1236 DSATPGFRMMELFGLEESRYSSVSGVSMVPGTFNSFPCFHLQADAFLAQPTRFIHPEGLP 1295
Query: 366 NRFSVEGTFNARGQ--RRPWSLLRARSNNV--LFSLILMPEPRKVAVLVQGSRA-----V 518
+ +++ F P++L N L +I+ + + +
Sbjct: 1296 SDYTITLLFRLLPDTPEEPFALWEVLDKNQEPLVGVIVDNGGKTLTFFNNDYKGEFQTVT 1355
Query: 519 FKSPE---LFTTGWHKLHVAVANRSVHIAVDCVELNPVNISA 635
F+ PE LF +HKLH+A++ S + +DC + +I+A
Sbjct: 1356 FEGPEIQKLFYGSFHKLHIAISKTSAKVVIDCRMVAEKSINA 1397
>UniRef50_Q05707 Cluster: Collagen alpha-1(XIV) chain precursor; n=33;
Euteleostomi|Rep: Collagen alpha-1(XIV) chain precursor -
Homo sapiens (Human)
Length = 1796
Score = 41.5 bits (93), Expect = 0.016
Identities = 32/156 (20%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Frame = +3
Query: 204 FQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVE 383
F+ + + + D S GV++ G+ ++ Y++ A ++ P + + P GLP+ +++
Sbjct: 1230 FKMMEMFGLVEKDFSSVEGVSMEPGTFNVFPCYQLHKDALVSQPTRYLHPEGLPSDYTIS 1289
Query: 384 GTFNARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQGSRA-----VFKSPEL 536
F + P++L + ++++ L +IL + + F+ PE+
Sbjct: 1290 FLFRILPDTPQEPFALWEILNKNSDPLVGVILDNGGKTLTYFNYDQSGDFQTVTFEGPEI 1349
Query: 537 ---FTTGWHKLHVAVANRSVHIAVDCVELNPVNISA 635
F +HKLH+ V+ V + +DC ++ ++A
Sbjct: 1350 RKIFYGSFHKLHIVVSETLVKVVIDCKQVGEKAMNA 1385
>UniRef50_Q4RWT3 Cluster: Chromosome 15 SCAF14981, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 15
SCAF14981, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1877
Score = 40.7 bits (91), Expect = 0.029
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = +3
Query: 264 TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGL-PNRFSVEGTFNARGQRRPWSLLRARS 440
TL +G + +AYR+ A ++ P K++FPGG+ P FS+ T + + S L +
Sbjct: 41 TLRRGGKP-DIAYRVSKTAQISTPTKQLFPGGVFPQDFSIMFTIKPKAGLQ--SFLLSMY 97
Query: 441 NNVLFSLILMPEPRKVAVLVQGSRA--------VFKSPELFTTGWHKLHVAVANRSVHIA 596
N+ + + R L + +F S L WH++ ++V +SV I
Sbjct: 98 NHQGIQQLGVEVGRGPVFLYEDQHGKPSADEYPLFHSVNLADGKWHRVALSVDKKSVTII 157
Query: 597 VDC 605
VDC
Sbjct: 158 VDC 160
>UniRef50_Q08BP6 Cluster: Zgc:153049; n=2; Danio rerio|Rep:
Zgc:153049 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 290
Score = 40.3 bits (90), Expect = 0.038
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRP--WSLLRA--RSNNVLFSLILMPEP 479
G L P + VFP GL + +S+ TF R + W +L+ + SLI+
Sbjct: 79 GSKPLFKPTESVFPNGLSHEYSIVATFRIRKTTKKDRWFVLQIFDKGGTSQVSLIVDGAK 138
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V L G VFK+ +L F +HKL V+V + +V I +DC
Sbjct: 139 KSVEFLALGFLKNSLLYVFKNRDLHALFDRQFHKLGVSVESNAVSIYLDC 188
>UniRef50_Q14993 Cluster: Collagen alpha-1(XIX) chain precursor
(Collagen alpha-1(Y) chain); n=22; Euteleostomi|Rep:
Collagen alpha-1(XIX) chain precursor (Collagen
alpha-1(Y) chain) - Homo sapiens (Human)
Length = 1142
Score = 40.3 bits (90), Expect = 0.038
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>UniRef50_UPI000065E422 Cluster: Collagen alpha-1(XI) chain
precursor.; n=1; Takifugu rubripes|Rep: Collagen
alpha-1(XI) chain precursor. - Takifugu rubripes
Length = 1668
Score = 39.9 bits (89), Expect = 0.050
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = +3
Query: 264 TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGL-PNRFSVEGTFNARGQRRPWSLLRARS 440
TL +G++ +AYR+ A ++ P K++FP G+ P FS+ T + + S L +
Sbjct: 27 TLRRGAKP-DIAYRVSKAAQISAPTKQLFPEGVFPEDFSIMFTIKPKAGLQ--SFLLSVY 83
Query: 441 NNVLFSLILMPEPRKVAVLVQGSRA--------VFKSPELFTTGWHKLHVAVANRSVHIA 596
NN + + R L + +F S L WH++ ++V +SV I
Sbjct: 84 NNQGIQQLGVEVGRGPVFLYEDQHGKPSADEYPLFHSVNLADGKWHRVALSVDKKSVTII 143
Query: 597 VDC 605
VDC
Sbjct: 144 VDC 146
>UniRef50_Q4SH63 Cluster: Chromosome 8 SCAF14587, whole genome shotgun
sequence; n=2; Eukaryota|Rep: Chromosome 8 SCAF14587,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1557
Score = 39.9 bits (89), Expect = 0.050
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 13/157 (8%)
Frame = +3
Query: 204 FQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVE 383
F+ + + + S GV+L GS + +YR+ A ++ P K + P LP+ +++
Sbjct: 1089 FRMMDKFGLVEKEYSTIPGVSLEPGSFNSFPSYRLHRDALVSQPTKYLHPEPLPSDYTIS 1148
Query: 384 GTFNARGQ--RRP---WSLLRARSNNVLFSLILMPEPRKVAVLVQGSRAVFKS------- 527
+ + P W +L R N L LIL + + + F++
Sbjct: 1149 IMLRLLPETPQEPFALWEILNKR-NEPLVGLILDNSGKTLTFFNHDFKGEFQTVTFEGNE 1207
Query: 528 -PELFTTGWHKLHVAVANRSVHIAVDCVELNPVNISA 635
+LF +HKLHV ++ SV +DC + ++ A
Sbjct: 1208 IKKLFHGSFHKLHVTISKTSVKAVLDCSAVGEKSVYA 1244
>UniRef50_UPI0000DBF905 Cluster: UPI0000DBF905 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF905 UniRef100 entry -
Rattus norvegicus
Length = 1513
Score = 39.5 bits (88), Expect = 0.066
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Frame = +3
Query: 339 KEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRARSNNVL--FSLILMPEPRKVAVLVQG 506
++VFP GLP+ ++ TF R ++ W + + + S+ L E + V G
Sbjct: 1 RDVFPQGLPDEYAFVTTFRFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVG 60
Query: 507 S-----RAVFKSPE---LFTTGWHKLHVAVANRSVHIAVDCV 608
+ R VF+ P+ LF WHK+ +++ ++V + +DC+
Sbjct: 61 AMEDAVRVVFRGPQVDNLFDRDWHKMALSIQAQNVSLYIDCM 102
>UniRef50_UPI0000DBF903 Cluster: UPI0000DBF903 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DBF903 UniRef100 entry -
Rattus norvegicus
Length = 1113
Score = 39.1 bits (87), Expect = 0.088
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Frame = +3
Query: 339 KEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRARSNNVL--FSLILMPEPRKVAVLVQG 506
++VFP GLP+ ++ TF R ++ W + + + S+ L E + V G
Sbjct: 11 EDVFPQGLPDEYAFVTTFRFRKTSRKEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVG 70
Query: 507 S-----RAVFKSPE---LFTTGWHKLHVAVANRSVHIAVDCV 608
+ R VF+ P+ LF WHK+ +++ ++V + +DC+
Sbjct: 71 AMEDAVRVVFRGPQVDNLFDRDWHKMALSIQAQNVSLYIDCM 112
>UniRef50_UPI00015A783F Cluster: LOC553362 protein; n=1; Danio
rerio|Rep: LOC553362 protein - Danio rerio
Length = 1353
Score = 37.9 bits (84), Expect = 0.20
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Frame = +3
Query: 273 QGSQDLQMAYRIGGGANLTLPLKEVFP-GGLPNRFSVEGTFNARGQRRPWSLLRARSNNV 449
+G+ + MAYRI L+ P K++FP P FS+ T A+ + + L V
Sbjct: 27 KGTSETDMAYRIDKKIQLSAPTKQLFPDSAFPENFSLMTTVKAKRNSQFFLLSLYDEQGV 86
Query: 450 -LFSLILMPEPRKVAVLVQGSRA-----VFKSPELFTTGWHKLHVAVANRSVHIAVDCVE 611
L + P + +G A +F+ L WH++ +V +SV + +DC +
Sbjct: 87 QQLGLEMGRSPVFLYEDHKGQPAPDLYPLFRKINLSDGKWHRIAYSVEGKSVTLYLDCKK 146
Query: 612 LNPVNI 629
+ + +
Sbjct: 147 VQTLEL 152
>UniRef50_Q8NFW1 Cluster: Collagen alpha-1(XXII) chain; n=23;
Euteleostomi|Rep: Collagen alpha-1(XXII) chain - Homo
sapiens (Human)
Length = 1626
Score = 37.1 bits (82), Expect = 0.35
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Frame = +3
Query: 240 DRSDTTGVTLVQGSQD--LQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQ 407
D D V + G ++ Q +Y G + ++VFP GLP+ ++ TF R +
Sbjct: 247 DLMDLFSVKEILGKRENGAQSSYVRMGSFPVVQSTEDVFPQGLPDEYAFVTTFRFRKTSR 306
Query: 408 RRPWSLLRARSNNVL--FSLILMPEPRKVAVLVQGS-----RAVFKSP---ELFTTGWHK 557
+ W + + + S+ L E + V G+ R VF+ +LF WHK
Sbjct: 307 KEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVGAMKDAVRVVFRGSRVNDLFDRDWHK 366
Query: 558 LHVAVANRSVHIAVDC 605
+ +++ ++V + +DC
Sbjct: 367 MALSIQAQNVSLHIDC 382
>UniRef50_UPI000065D67A Cluster: Collagen alpha-1(XIV) chain precursor
(Undulin).; n=1; Takifugu rubripes|Rep: Collagen
alpha-1(XIV) chain precursor (Undulin). - Takifugu
rubripes
Length = 1721
Score = 36.7 bits (81), Expect = 0.47
Identities = 42/176 (23%), Positives = 73/176 (41%), Gaps = 32/176 (18%)
Frame = +3
Query: 204 FQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVE 383
F+ + + + S GV+L GS + +YR+ A ++ P K + P GLP+ +++
Sbjct: 1287 FRMMGKFGLVEKEYSTIPGVSLEPGSFNSFPSYRLHRDALVSQPTKYLHPEGLPSDYTIS 1346
Query: 384 GTFNARGQ--RRPWSL--LRARSNNVLFSLIL-----------MPEPRKVAVLVQGSRAV 518
+ + P++L + +SN L LIL P P V G
Sbjct: 1347 MMLRLLPETPQEPFALWEILNQSNEPLVGLILDSKNNHPNACLCPSPLSVLPTDSGKTLT 1406
Query: 519 F-----------------KSPELFTTGWHKLHVAVANRSVHIAVDCVELNPVNISA 635
F + +LF +HKLHV V+ SV + +DC + +++A
Sbjct: 1407 FFNHNFKGEFQTVTFEGNEIKKLFHGSFHKLHVTVSKTSVKVVLDCSAVGEKSVNA 1462
>UniRef50_P25940 Cluster: Collagen alpha-3(V) chain precursor; n=77;
Euteleostomi|Rep: Collagen alpha-3(V) chain precursor -
Homo sapiens (Human)
Length = 1745
Score = 35.9 bits (79), Expect = 0.82
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +3
Query: 297 AYRIGGGANLTLPLKEVFP-GGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMP 473
A+RIG + L +P E+FP G P FS+ RGQ S+L + + + +
Sbjct: 64 AFRIGQASTLGIPTWELFPEGHFPENFSL--LITLRGQPANQSVLLSIYDERGARQLGLA 121
Query: 474 EPRKVAVLVQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDCVELNPV 623
+ +L R + + L WH++ V++ V + DC PV
Sbjct: 122 LGPALGLLGDPFRPLPQQVNLTDGRWHRVAVSIDGEMVTLVADCEAQPPV 171
>UniRef50_UPI0000F1F770 Cluster: PREDICTED: similar to collagen,
type XXI, alpha 1,; n=2; Danio rerio|Rep: PREDICTED:
similar to collagen, type XXI, alpha 1, - Danio rerio
Length = 429
Score = 35.5 bits (78), Expect = 1.1
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 14/128 (10%)
Frame = +3
Query: 273 QGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL--LRARS 440
QGS AY++ +L+ + +FPGGLP + T +G W L ++ +
Sbjct: 224 QGSFYGSKAYQVTSRDDLSESTRMLFPGGLPPSYVFVATLKYKGSVAIEEWDLWRIQTKD 283
Query: 441 NNVLFSLILMPEPRKVAVLVQGSR-------AVF-KSP--ELFTTGWHKLHVAVANRSVH 590
++ L R V S+ VF KSP +LF WH+L + V V
Sbjct: 284 EKPQMAVSLNGLDRTVMFTTTTSKTPSGTQTVVFTKSPAKKLFDEKWHQLRLLVTEEDVT 343
Query: 591 IAVDCVEL 614
+ VD +E+
Sbjct: 344 LYVDDLEI 351
>UniRef50_UPI000069F8A6 Cluster: Collagen alpha-1(XII) chain
precursor.; n=2; Xenopus tropicalis|Rep: Collagen
alpha-1(XII) chain precursor. - Xenopus tropicalis
Length = 1304
Score = 35.1 bits (77), Expect = 1.4
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL-- 425
GV++ GS + AY + A ++LP E+ P GLP +++ F + P+SL
Sbjct: 848 GVSMQPGSFNSFPAYNLHKDAFISLPTSELHPEGLPPSYTIILLFRLLPETPNEPFSLWQ 907
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGS-----RAVFKSPE---LFTTGWHKLHVAVANR 581
+ + + L P + ++ +G+ F E LF +HK+ + V+
Sbjct: 908 ITDKGYKPQVGVNLDPSKKTLSFFNKGAAGDTQTVTFDGNEVKKLFYGSFHKVLIVVSPS 967
Query: 582 SVHIAVDCVEL 614
V I +DC E+
Sbjct: 968 YVRIYIDCSEV 978
>UniRef50_UPI000069F8A4 Cluster: Collagen alpha-1(XII) chain
precursor.; n=1; Xenopus tropicalis|Rep: Collagen
alpha-1(XII) chain precursor. - Xenopus tropicalis
Length = 1779
Score = 35.1 bits (77), Expect = 1.4
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL-- 425
GV++ GS + AY + A ++LP E+ P GLP +++ F + P+SL
Sbjct: 1258 GVSMQPGSFNSFPAYNLHKDAFISLPTSELHPEGLPPSYTIILLFRLLPETPNEPFSLWQ 1317
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGS-----RAVFKSPE---LFTTGWHKLHVAVANR 581
+ + + L P + ++ +G+ F E LF +HK+ + V+
Sbjct: 1318 ITDKGYKPQVGVNLDPSKKTLSFFNKGAAGDTQTVTFDGNEVKKLFYGSFHKVLIVVSPS 1377
Query: 582 SVHIAVDCVEL 614
V I +DC E+
Sbjct: 1378 YVRIYIDCSEV 1388
>UniRef50_Q4SD21 Cluster: Chromosome 14 SCAF14645, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 14 SCAF14645, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 2255
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 246 SDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSV 380
S T GV++ GS + +YRI A LT P +V P GLP+ +++
Sbjct: 1498 SYTKGVSMEPGSFNSFTSYRIHKNAFLTQPSADVHPDGLPHAYTI 1542
>UniRef50_A7S1U8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 693
Score = 34.7 bits (76), Expect = 1.9
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Frame = +3
Query: 294 MAYRIGGGANL-TLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILM 470
+AY + G L ++P +FP G+P FS+ T +L + N SL L
Sbjct: 73 VAYHLRGTELLQSVPTGTLFPYGIPESFSIMATVRTEIDNSG-NLFSVYNANGELSLSLS 131
Query: 471 PEPRKVAVLVQG---SRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
P ++ + SR F++ L WH++ ++VA V + DC
Sbjct: 132 VNPVELQYRTRSGGVSRIQFQA-SLADGEWHRIAISVARDQVKLLSDC 178
>UniRef50_A3RYW5 Cluster: Co-activator of prophage gene expression
IbrA; n=7; Proteobacteria|Rep: Co-activator of prophage
gene expression IbrA - Ralstonia solanacearum UW551
Length = 416
Score = 34.3 bits (75), Expect = 2.5
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 105 SILFSYSNGQADNFTTMAPFARSFCSPNS 191
S+ F ++ AD TTM P A S CSPNS
Sbjct: 386 SLSFGFARQDADGLTTMEPPAESTCSPNS 414
>UniRef50_UPI0000F2130C Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 921
Score = 33.5 bits (73), Expect = 4.4
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 12/127 (9%)
Frame = +3
Query: 270 VQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSL----LRAR 437
+QGS + AY + ++T +++FP GLP + T +G S ++++
Sbjct: 246 IQGSLVSEGAYLLDKTTDITENTRDIFPEGLPPSYVFVSTLRLKGSSSTESFDLWRVKSK 305
Query: 438 SNNVLFSLILMPEPRKVAVLV-----QGSRAVFKSP---ELFTTGWHKLHVAVANRSVHI 593
+ ++ L + ++ Q VF +P +F WH+L V V R V
Sbjct: 306 DGQIQAAVTLSGLQKYISFTTTNTFNQEQTVVFDAPGIEAVFDGSWHQLKVLVKPRQVIC 365
Query: 594 AVDCVEL 614
+D E+
Sbjct: 366 YLDDQEI 372
>UniRef50_UPI00006CD596 Cluster: hypothetical protein
TTHERM_00510160; n=2; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00510160 - Tetrahymena
thermophila SB210
Length = 1184
Score = 33.5 bits (73), Expect = 4.4
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 7 ASCPHTYCATFSEKCSLTKLQCFS 78
ASCP+ YC+T SE +LT QC S
Sbjct: 332 ASCPNYYCSTCSEGYTLTNSQCVS 355
>UniRef50_Q4SXE3 Cluster: Chromosome undetermined SCAF12445, whole
genome shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF12445, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 2225
Score = 33.5 bits (73), Expect = 4.4
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 531 ELFTTGWHKLHVAVANRSVHIAVDC 605
+LF +HKLHVAV+ S +A+DC
Sbjct: 1612 KLFYGSFHKLHVAVSQTSAKVAIDC 1636
>UniRef50_Q4SMJ3 Cluster: Chromosome 18 SCAF14547, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 18
SCAF14547, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1557
Score = 33.5 bits (73), Expect = 4.4
Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 10/129 (7%)
Frame = +3
Query: 273 QGSQDLQMAYRIGGGANLTLPLKEVFP-GGLPNRFSVEGTFNARGQRRPWSLLRARSNNV 449
+G + +A+RI L+ P +++FP P FSV T A + + LL +
Sbjct: 27 EGQELTDLAFRIDKKIQLSAPTRQLFPHSSFPMNFSVMTTVRAVKDSQVF-LLSLYDSQG 85
Query: 450 LFSLILMPEPRKVAVLVQGSRAVFKSPELFTT---------GWHKLHVAVANRSVHIAVD 602
L L E + V + + SPEL+ T WH++ +V + V + +D
Sbjct: 86 TQQLGL--EIGRSPVFLYEDQEGQPSPELYPTFRKINLADGKWHRVAYSVEGQLVTLYLD 143
Query: 603 CVELNPVNI 629
CV L+ +++
Sbjct: 144 CVRLDTLDL 152
>UniRef50_Q4E0W9 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 699
Score = 33.5 bits (73), Expect = 4.4
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = -1
Query: 628 MFTGFNSTQSTAI*TDRFATATCSLCHPVVNNSGLLNTALEPWTRTATFLGSGIKMRENS 449
+ TG NST + + T R SLCH +++ GLL P L ++ +
Sbjct: 226 LVTGLNSTATEELLTSRLFGGDVSLCHDSIDSFGLLTVFRAP---IQELLARHEELAPSL 282
Query: 448 TLFERARRRLHGLR-CPRAL 392
T+ R+ LH CP+ +
Sbjct: 283 TILRRSFAALHPSNGCPKTI 302
>UniRef50_Q17A79 Cluster: Collagen alpha chain, anopheles; n=7;
Coelomata|Rep: Collagen alpha chain, anopheles - Aedes
aegypti (Yellowfever mosquito)
Length = 1746
Score = 33.5 bits (73), Expect = 4.4
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Frame = +3
Query: 297 AYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPE 476
AY + L++ +VFP G P+ FS+ A L S++ L+LM
Sbjct: 16 AYNLNQDTVLSIGTTQVFPNGFPSDFSILVVLKATPNLVRVPLFTVYSSDSEEVLMLM-V 74
Query: 477 PRKVAVLVQGSRAVFKSPELFTTG-------WHKLHVAVANRSVHIAVDCVE 611
+VA+ Q + + L + G WH+L ++V SV + DC E
Sbjct: 75 GMEVALYYQDTDGNPEEESLISFGVSIDDERWHRLGISVKGDSVTLIKDCHE 126
>UniRef50_Q19350 Cluster: Drosophila crumbs homolog protein 1; n=2;
Caenorhabditis|Rep: Drosophila crumbs homolog protein 1 -
Caenorhabditis elegans
Length = 1722
Score = 33.1 bits (72), Expect = 5.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +1
Query: 376 VWREPSMLADNEGRGVFCEHVQITCCFLSF*CRNQGKWRS 495
VW DN RG C+H TC L F C N G R+
Sbjct: 1385 VWNNTVCNCDNNWRGAHCQHQMDTC--LDFPCNNDGVCRT 1422
>UniRef50_UPI0000E48BC9 Cluster: PREDICTED: similar to alpha 1 (V)
collagen; n=4; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to alpha 1 (V) collagen -
Strongylocentrotus purpuratus
Length = 1223
Score = 32.7 bits (71), Expect = 7.6
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Frame = +3
Query: 294 MAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRA--RSNNVLFSLIL 467
+ YR N T P V P+ FSV Q ++ +NN+L L +
Sbjct: 42 LVYRFKPQGNSTFPTANVVGTSFPSSFSVLMNMQY-SQEDLGDIVTVVDANNNILLRLRM 100
Query: 468 MPEPRKVAVLVQGSRAV-FKSPELFTTGWHKLHVAVANRSVHIAVDCVEL 614
+V V +Q + F + + WHK+ V + + + +DC E+
Sbjct: 101 GYSIFEVQVRIQRLTSYRFVAEDFADNKWHKVAVGINKNQIKVYMDCAEV 150
>UniRef50_Q7TBL9 Cluster: Pc2 protein; n=2; Tenuivirus|Rep: Pc2
protein - Iranian wheat stripe virus
Length = 834
Score = 32.7 bits (71), Expect = 7.6
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 78 WLPYVLVFLSILFSYSNGQADNFTTMAPFARSFCSPNSKDSDFQTVALIAVY 233
++PY+ + LS+LFS +NG ++ + C N KD DF + L+ +Y
Sbjct: 364 YIPYIFLGLSLLFSTANGLCNDLLSSLSNI-EVC--NGKDCDFSSKILLTLY 412
>UniRef50_Q87W48 Cluster: Type III effector HopAA1-2; n=4;
Pseudomonas syringae group|Rep: Type III effector
HopAA1-2 - Pseudomonas syringae pv. tomato
Length = 487
Score = 32.7 bits (71), Expect = 7.6
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -1
Query: 634 AEMFTGFNSTQSTAI*TDRFATATC-SLCHPVVNNSGLLNTALEPWTRTATFLGSGIKMR 458
AE F +T S+A FA A+ P +N L T L+P T + SG +
Sbjct: 106 AEKFDRLATTASSAFENTPFAAASVLQYMQPAINKGDWLATPLKPLTPLISGALSGAMDQ 165
Query: 457 ENSTLFERARRRLHGL 410
+ + +RAR LH L
Sbjct: 166 VGTKMMDRARGDLHYL 181
>UniRef50_A5K1Y1 Cluster: Transporter, putative; n=1; Plasmodium
vivax|Rep: Transporter, putative - Plasmodium vivax
Length = 914
Score = 32.7 bits (71), Expect = 7.6
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +2
Query: 323 SNFTSKRSVPGWSSEPVQCGGNLQCSRTTKAVESSASTFK*RAVFSHFNAGTKESGGPSP 502
SN +S R+ PG S P GG Q S S +T + G +SGGP
Sbjct: 400 SNSSSGRAAPGGQSRPA--GGRRQSSNAQSGNAQSGNTQSGNTQSGNTQGGNTQSGGPQR 457
Query: 503 G 505
G
Sbjct: 458 G 458
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,449,945
Number of Sequences: 1657284
Number of extensions: 13104525
Number of successful extensions: 32159
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 31072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32132
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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