Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a03f
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733...    29   2.3  
11_06_0356 - 22654329-22654571,22654695-22654898,22655065-226553...    29   4.1  
11_01_0644 - 5180148-5180308,5181124-5181305,5181348-5181583           29   4.1  
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124...    28   5.4  
10_04_0002 - 7372425-7372601,7372697-7372780,7372859-7373010,737...    28   7.1  
10_08_0301 - 16619499-16619675,16619770-16619853,16619932-166200...    27   9.4  

>05_05_0110 +
           22470869-22470920,22471044-22471146,22473261-22473358,
           22473430-22473530,22474052-22474129,22474578-22474655
          Length = 169

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 303 YTPFEDPGTPELGSHRWCPIYPVD 232
           + P EDP   EL S RW P++ V+
Sbjct: 97  HPPGEDPNGYELASERWTPVHTVE 120


>11_06_0356 -
           22654329-22654571,22654695-22654898,22655065-22655319,
           22655435-22655626,22655738-22656046,22656149-22656355,
           22656450-22656527,22657493-22657747,22657850-22658000,
           22658269-22658500,22658631-22658886,22658960-22659091
          Length = 837

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
 Frame = +3

Query: 105 SILFSYSNGQADNFTTMAPFARSFCSP-----NSKDSDFQTVALIAVYRLDRSDT-TGVT 266
           S+ FSY     D  T + P+  +  +P     +  +S       I  Y   RSD  T +T
Sbjct: 577 SLAFSYIKPNGDRLT-VGPWGGALPNPYTINLDPSESLLDVYGTIGPYVDSRSDVITSIT 635

Query: 267 LVQGSQDLQMAYRIGGGANLTLPLK 341
            V  S+D    Y  GGG   + P+K
Sbjct: 636 FVT-SKDTYGPYGTGGGVPFSTPVK 659


>11_01_0644 - 5180148-5180308,5181124-5181305,5181348-5181583
          Length = 192

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 583 DRFATATCSLCHPVVNNSGLLNTALEPWTRTAT 485
           D FAT T SL        G     ++PWT+T T
Sbjct: 147 DLFATGTASLACTFSGGFGSWKFGIDPWTQTCT 179


>01_06_1289 -
           36010924-36011001,36011441-36011518,36012321-36012421,
           36012506-36012603,36016213-36016315,36016435-36016486
          Length = 169

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 303 YTPFEDPGTPELGSHRWCPIYPVD 232
           + P +DP   EL S RW P++ V+
Sbjct: 97  HPPGDDPNGYELASERWTPVHTVE 120


>10_04_0002 -
           7372425-7372601,7372697-7372780,7372859-7373010,
           7373229-7373324,7373406-7373554,7373723-7373788,
           7373925-7373994,7374106-7374236,7376464-7376471,
           7377946-7378002
          Length = 329

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 211 RWL**PYIDWIDRTPPV*P*FRGPRIFK 294
           +W   P+ DWID T P+ P F G  + K
Sbjct: 152 KWGLRPFSDWIDDTLPIEPWFIGGSVIK 179


>10_08_0301 -
           16619499-16619675,16619770-16619853,16619932-16620083,
           16620296-16620391,16620473-16620627,16620791-16620856,
           16620993-16621062,16621175-16621305,16622121-16622307,
           16622410-16622485
          Length = 397

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 211 RWL**PYIDWIDRTPPV*P*FRGPRIFK 294
           +W   P+ DWID T P+ P F G  + K
Sbjct: 220 KWGLPPFSDWIDDTLPIEPWFIGGPVIK 247


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,072,063
Number of Sequences: 37544
Number of extensions: 384861
Number of successful extensions: 921
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)