Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner10a03f
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for ... 59 1e-08
BC015409-1|AAH15409.1| 328|Homo sapiens COL9A1 protein protein. 59 1e-08
AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha ... 59 1e-08
AL080275-4|CAI19591.1| 328|Homo sapiens collagen type IX alpha ... 59 1e-08
AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha ... 59 1e-08
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 59 1e-08
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen... 54 6e-07
U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein. 50 5e-06
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 50 5e-06
U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein. 50 5e-06
BX248309-3|CAM26007.1| 262|Homo sapiens collagen, type XI, alph... 50 5e-06
BX248309-2|CAM26006.1| 596|Homo sapiens collagen, type XI, alph... 50 5e-06
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 50 5e-06
BC053886-1|AAH53886.1| 290|Homo sapiens COL11A2 protein protein. 50 5e-06
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 50 5e-06
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 50 5e-06
AL844527-5|CAM25784.1| 290|Homo sapiens collagen, type XI, alph... 50 5e-06
AL844527-4|CAM25783.1| 624|Homo sapiens collagen, type XI, alph... 50 5e-06
AL662824-18|CAM24942.1| 290|Homo sapiens collagen, type XI, alp... 50 5e-06
AL662824-17|CAM24941.1| 624|Homo sapiens collagen, type XI, alp... 50 5e-06
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 50 5e-06
AL645940-4|CAM25430.1| 290|Homo sapiens collagen type XI alpha ... 50 5e-06
AL645940-3|CAM25429.1| 624|Homo sapiens collagen type XI alpha ... 50 5e-06
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 50 5e-06
AL031228-17|CAI95624.1| 269|Homo sapiens collagen type XI alpha... 50 5e-06
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 50 5e-06
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 50 5e-06
U41069-1|AAC17464.1| 537|Homo sapiens collagen alpha2(XI) protein. 50 7e-06
L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen ... 47 6e-05
U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1... 44 3e-04
AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha... 44 3e-04
AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha... 44 3e-04
AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha... 44 3e-04
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 42 0.001
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 42 0.001
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 42 0.001
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 42 0.001
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 42 0.001
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 42 0.001
Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein. 42 0.002
BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein. 42 0.002
AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 ch... 41 0.003
M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collage... 40 0.006
D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain pr... 40 0.006
BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alp... 40 0.006
BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alp... 40 0.006
AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha... 40 0.006
AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha... 40 0.006
AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha... 40 0.006
AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha... 40 0.006
AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha... 40 0.006
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 37 0.052
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 36 0.091
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 36 0.12
BC021197-1|AAH21197.2| 583|Homo sapiens C21orf29 protein protein. 33 1.1
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.0
BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein. 32 2.0
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.0
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 32 2.0
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.0
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.0
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 32 2.0
AJ487962-1|CAD32309.1| 669|Homo sapiens TSP-EAR protein protein. 31 2.6
U66580-1|AAC51303.1| 349|Homo sapiens putative G protein-couple... 30 6.0
BC067534-1|AAH67534.2| 349|Homo sapiens G protein-coupled recep... 30 6.0
BC067533-1|AAH67533.2| 349|Homo sapiens G protein-coupled recep... 30 6.0
BC067532-1|AAH67532.2| 349|Homo sapiens G protein-coupled recep... 30 6.0
BC066886-1|AAH66886.2| 349|Homo sapiens G protein-coupled recep... 30 6.0
BC066885-1|AAH66885.2| 349|Homo sapiens G protein-coupled recep... 30 6.0
>X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for
alpha1(IX) collagen (long form). ).
Length = 931
Score = 58.8 bits (136), Expect = 1e-08
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 219 LIAVYRLDRSDTT-GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN 395
LI+ +++D++ + + V GS LQ+AY++G + +P + ++P GLP +S TF
Sbjct: 59 LISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFR 118
Query: 396 ARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKS-PELFTT 545
G ++ W++ ++ S + + + + V +G A F + LF +
Sbjct: 119 MTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDS 178
Query: 546 GWHKLHVAVANRSVHIAVDCVELNPVNI 629
WHK+ + V S + VDC + + I
Sbjct: 179 QWHKIMIGVERSSATLFVDCNRIESLPI 206
>BC015409-1|AAH15409.1| 328|Homo sapiens COL9A1 protein protein.
Length = 328
Score = 58.8 bits (136), Expect = 1e-08
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 219 LIAVYRLDRSDTT-GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN 395
LI+ +++D++ + + V GS LQ+AY++G + +P + ++P GLP +S TF
Sbjct: 59 LISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFR 118
Query: 396 ARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKS-PELFTT 545
G ++ W++ ++ S + + + + V +G A F + LF +
Sbjct: 119 MTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDS 178
Query: 546 GWHKLHVAVANRSVHIAVDCVELNPVNI 629
WHK+ + V S + VDC + + I
Sbjct: 179 QWHKIMIGVERSSATLFVDCNRIESLPI 206
>AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 58.8 bits (136), Expect = 1e-08
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 219 LIAVYRLDRSDTT-GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN 395
LI+ +++D++ + + V GS LQ+AY++G + +P + ++P GLP +S TF
Sbjct: 59 LISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFR 118
Query: 396 ARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKS-PELFTT 545
G ++ W++ ++ S + + + + V +G A F + LF +
Sbjct: 119 MTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDS 178
Query: 546 GWHKLHVAVANRSVHIAVDCVELNPVNI 629
WHK+ + V S + VDC + + I
Sbjct: 179 QWHKIMIGVERSSATLFVDCNRIESLPI 206
>AL080275-4|CAI19591.1| 328|Homo sapiens collagen type IX alpha 1
protein.
Length = 328
Score = 58.8 bits (136), Expect = 1e-08
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 219 LIAVYRLDRSDTT-GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN 395
LI+ +++D++ + + V GS LQ+AY++G + +P + ++P GLP +S TF
Sbjct: 59 LISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFR 118
Query: 396 ARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKS-PELFTT 545
G ++ W++ ++ S + + + + V +G A F + LF +
Sbjct: 119 MTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDS 178
Query: 546 GWHKLHVAVANRSVHIAVDCVELNPVNI 629
WHK+ + V S + VDC + + I
Sbjct: 179 QWHKIMIGVERSSATLFVDCNRIESLPI 206
>AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 58.8 bits (136), Expect = 1e-08
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 219 LIAVYRLDRSDTT-GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN 395
LI+ +++D++ + + V GS LQ+AY++G + +P + ++P GLP +S TF
Sbjct: 59 LISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFR 118
Query: 396 ARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKS-PELFTT 545
G ++ W++ ++ S + + + + V +G A F + LF +
Sbjct: 119 MTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDS 178
Query: 546 GWHKLHVAVANRSVHIAVDCVELNPVNI 629
WHK+ + V S + VDC + + I
Sbjct: 179 QWHKIMIGVERSSATLFVDCNRIESLPI 206
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 58.8 bits (136), Expect = 1e-08
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 11/148 (7%)
Frame = +3
Query: 219 LIAVYRLDRSDTT-GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFN 395
LI+ +++D++ + + V GS LQ+AY++G + +P + ++P GLP +S TF
Sbjct: 59 LISQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFR 118
Query: 396 ARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKS-PELFTT 545
G ++ W++ ++ S + + + + V +G A F + LF +
Sbjct: 119 MTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDS 178
Query: 546 GWHKLHVAVANRSVHIAVDCVELNPVNI 629
WHK+ + V S + VDC + + I
Sbjct: 179 QWHKIMIGVERSSATLFVDCNRIESLPI 206
>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
protein.
Length = 1603
Score = 53.6 bits (123), Expect = 6e-07
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTF--NARGQRRPWSLLRARSNNVL--FSLILMPEP 479
G A +T P + VFP GLP F++ T ++ W L + N SL + +
Sbjct: 80 GAAPVTQPTRRVFPRGLPEEFALVLTLLLKKHTHQKTWYLFQVTDANGYPQISLEVNSQE 139
Query: 480 RKVAVLVQGS-----RAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
R + + QG +F P+LF WHKL ++VA R + VDC
Sbjct: 140 RSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDC 186
>U32169-3|AAC50215.1| 1629|Homo sapiens Pro-a2(XI) protein.
Length = 1629
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>U32169-1|AAC50214.1| 1736|Homo sapiens Pro-a2(XI) protein.
Length = 1736
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>BX248309-3|CAM26007.1| 262|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 262
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 18 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 77
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 78 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 137
Query: 600 DC 605
DC
Sbjct: 138 DC 139
>BX248309-2|CAM26006.1| 596|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 596
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 18 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 77
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 78 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 137
Query: 600 DC 605
DC
Sbjct: 138 DC 139
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 18 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 77
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 78 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 137
Query: 600 DC 605
DC
Sbjct: 138 DC 139
>BC053886-1|AAH53886.1| 290|Homo sapiens COL11A2 protein protein.
Length = 290
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL844527-5|CAM25784.1| 290|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 290
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL844527-4|CAM25783.1| 624|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 624
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL662824-18|CAM24942.1| 290|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 290
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL662824-17|CAM24941.1| 624|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 624
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL645940-4|CAM25430.1| 290|Homo sapiens collagen type XI alpha 2
protein.
Length = 290
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL645940-3|CAM25429.1| 624|Homo sapiens collagen type XI alpha 2
protein.
Length = 624
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL031228-17|CAI95624.1| 269|Homo sapiens collagen type XI alpha 2
protein.
Length = 269
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 25 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 84
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 85 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 144
Query: 600 DC 605
DC
Sbjct: 145 DC 146
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 50.4 bits (115), Expect = 5e-06
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P FS+ R G + P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFSLLTVVRTRPGLQAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>U41069-1|AAC17464.1| 537|Homo sapiens collagen alpha2(XI) protein.
Length = 537
Score = 50.0 bits (114), Expect = 7e-06
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRA 434
GV +G +AYR+ A L+ P +++FPGG P F + R G R P L +
Sbjct: 46 GVRRAKGICPADVAYRVARPAQLSAPTRQLFPGGFPKDFPLLTVVRTRPGLRAPLLTLYS 105
Query: 435 RSNNVLFSLILMPEPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAV 599
L L R + G S+ VF+ L WH++ VAV +SV + V
Sbjct: 106 AQGVRQLGLELGRPVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIV 165
Query: 600 DC 605
DC
Sbjct: 166 DC 167
>L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen
protein.
Length = 663
Score = 46.8 bits (106), Expect = 6e-05
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = +3
Query: 297 AYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR-GQRRPWSLLRARSNNVLFSLILMP 473
AYR+ A L+ P +++FPGG P F + R G R P L + L L
Sbjct: 1 AYRVARPAQLSAPTRQLFPGGFPKDFPLLTVVRTRPGLRAPLLTLYSAQGVRQLGLELGR 60
Query: 474 EPRKVAVLVQG-----SRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
R + G S+ VF+ L WH++ VAV +SV + VDC
Sbjct: 61 PVRFLYEDQTGRPQPPSQPVFRGLSLADGKWHRVAVAVKGQSVTLIVDC 109
>U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1
protein.
Length = 3063
Score = 44.4 bits (100), Expect = 3e-04
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL-- 425
GV+L GS AYRI A + P ++ P GLP +++ F + P+++
Sbjct: 2539 GVSLESGSFPSYSAYRIQKNAFVNQPTADLHPNGLPPSYTIILLFRLLPETPSDPFAIWQ 2598
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGSR-----AVFKSPE---LFTTGWHKLHVAVANR 581
+ R +I P + ++ + +R F + E LF +HK+H+ V ++
Sbjct: 2599 ITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTEEVKTLFYGSFHKVHIVVTSK 2658
Query: 582 SVHIAVDCVEL 614
SV I +DC E+
Sbjct: 2659 SVKIYIDCYEI 2669
>AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 44.4 bits (100), Expect = 3e-04
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL-- 425
GV+L GS AYRI A + P ++ P GLP +++ F + P+++
Sbjct: 2539 GVSLESGSFPSYSAYRIQKNAFVNQPTADLHPNGLPPSYTIILLFRLLPETPSDPFAIWQ 2598
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGSR-----AVFKSPE---LFTTGWHKLHVAVANR 581
+ R +I P + ++ + +R F + E LF +HK+H+ V ++
Sbjct: 2599 ITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTEEVKTLFYGSFHKVHIVVTSK 2658
Query: 582 SVHIAVDCVEL 614
SV I +DC E+
Sbjct: 2659 SVKIYIDCYEI 2669
>AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 44.4 bits (100), Expect = 3e-04
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL-- 425
GV+L GS AYRI A + P ++ P GLP +++ F + P+++
Sbjct: 2539 GVSLESGSFPSYSAYRIQKNAFVNQPTADLHPNGLPPSYTIILLFRLLPETPSDPFAIWQ 2598
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGSR-----AVFKSPE---LFTTGWHKLHVAVANR 581
+ R +I P + ++ + +R F + E LF +HK+H+ V ++
Sbjct: 2599 ITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTEEVKTLFYGSFHKVHIVVTSK 2658
Query: 582 SVHIAVDCVEL 614
SV I +DC E+
Sbjct: 2659 SVKIYIDCYEI 2669
>AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 44.4 bits (100), Expect = 3e-04
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = +3
Query: 258 GVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNARGQ--RRPWSL-- 425
GV+L GS AYRI A + P ++ P GLP +++ F + P+++
Sbjct: 2539 GVSLESGSFPSYSAYRIQKNAFVNQPTADLHPNGLPPSYTIILLFRLLPETPSDPFAIWQ 2598
Query: 426 LRARSNNVLFSLILMPEPRKVAVLVQGSR-----AVFKSPE---LFTTGWHKLHVAVANR 581
+ R +I P + ++ + +R F + E LF +HK+H+ V ++
Sbjct: 2599 ITDRDYKPQVGVIADPSSKTLSFFNKDTRGEVQTVTFDTEEVKTLFYGSFHKVHIVVTSK 2658
Query: 582 SVHIAVDCVEL 614
SV I +DC E+
Sbjct: 2659 SVKIYIDCYEI 2669
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 42.3 bits (95), Expect = 0.001
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGG-LPNRFSVEGTFNARGQRRPW 419
S TTG T + S+ AYR+ A L+ P K++FPGG P FS+ F + ++
Sbjct: 55 SKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSI--LFTVKPKKGIQ 112
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQ---GSRA-----VFKSPELFTTGWHKLHVAVA 575
S L + N I + R L + G A +F++ + WH++ ++V
Sbjct: 113 SFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVE 172
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 173 KKTVTMIVDC 182
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 42.3 bits (95), Expect = 0.001
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGG-LPNRFSVEGTFNARGQRRPW 419
S TTG T + S+ AYR+ A L+ P K++FPGG P FS+ F + ++
Sbjct: 55 SKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSI--LFTVKPKKGIQ 112
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQ---GSRA-----VFKSPELFTTGWHKLHVAVA 575
S L + N I + R L + G A +F++ + WH++ ++V
Sbjct: 113 SFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVE 172
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 173 KKTVTMIVDC 182
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 42.3 bits (95), Expect = 0.001
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGG-LPNRFSVEGTFNARGQRRPW 419
S TTG T + S+ AYR+ A L+ P K++FPGG P FS+ F + ++
Sbjct: 55 SKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSI--LFTVKPKKGIQ 112
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQ---GSRA-----VFKSPELFTTGWHKLHVAVA 575
S L + N I + R L + G A +F++ + WH++ ++V
Sbjct: 113 SFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVE 172
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 173 KKTVTMIVDC 182
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 42.3 bits (95), Expect = 0.001
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGG-LPNRFSVEGTFNARGQRRPW 419
S TTG T + S+ AYR+ A L+ P K++FPGG P FS+ F + ++
Sbjct: 55 SKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSI--LFTVKPKKGIQ 112
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQ---GSRA-----VFKSPELFTTGWHKLHVAVA 575
S L + N I + R L + G A +F++ + WH++ ++V
Sbjct: 113 SFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVE 172
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 173 KKTVTMIVDC 182
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 42.3 bits (95), Expect = 0.001
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGG-LPNRFSVEGTFNARGQRRPW 419
S TTG T + S+ AYR+ A L+ P K++FPGG P FS+ F + ++
Sbjct: 55 SKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSI--LFTVKPKKGIQ 112
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQ---GSRA-----VFKSPELFTTGWHKLHVAVA 575
S L + N I + R L + G A +F++ + WH++ ++V
Sbjct: 113 SFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVE 172
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 173 KKTVTMIVDC 182
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 42.3 bits (95), Expect = 0.001
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Frame = +3
Query: 246 SDTTGV-TLVQGSQDLQMAYRIGGGANLTLPLKEVFPGG-LPNRFSVEGTFNARGQRRPW 419
S TTG T + S+ AYR+ A L+ P K++FPGG P FS+ F + ++
Sbjct: 55 SKTTGFCTNRKNSKGSDTAYRVSKQAQLSAPTKQLFPGGTFPEDFSI--LFTVKPKKGIQ 112
Query: 420 SLLRARSNNVLFSLILMPEPRKVAVLVQ---GSRA-----VFKSPELFTTGWHKLHVAVA 575
S L + N I + R L + G A +F++ + WH++ ++V
Sbjct: 113 SFLLSIYNEHGIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVE 172
Query: 576 NRSVHIAVDC 605
++V + VDC
Sbjct: 173 KKTVTMIVDC 182
>Y11710-1|CAA72402.1| 755|Homo sapiens collagen type XIV protein.
Length = 755
Score = 41.5 bits (93), Expect = 0.002
Identities = 32/156 (20%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Frame = +3
Query: 204 FQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVE 383
F+ + + + D S GV++ G+ ++ Y++ A ++ P + + P GLP+ +++
Sbjct: 205 FKMMEMFGLVEKDFSSVEGVSMEPGTFNVFPCYQLHKDALVSQPTRYLHPEGLPSDYTIS 264
Query: 384 GTFNARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQGSRA-----VFKSPEL 536
F + P++L + ++++ L +IL + + F+ PE+
Sbjct: 265 FLFRILPDTPQEPFALWEILNKNSDPLVGVILDNGGKTLTYFNYDQSGDFQTVTFEGPEI 324
Query: 537 ---FTTGWHKLHVAVANRSVHIAVDCVELNPVNISA 635
F +HKLH+ V+ V + +DC ++ ++A
Sbjct: 325 RKIFYGSFHKLHIVVSETLVKVVIDCKQVGEKAMNA 360
>BC014640-1|AAH14640.1| 759|Homo sapiens COL14A1 protein protein.
Length = 759
Score = 41.5 bits (93), Expect = 0.002
Identities = 32/156 (20%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Frame = +3
Query: 204 FQTVALIAVYRLDRSDTTGVTLVQGSQDLQMAYRIGGGANLTLPLKEVFPGGLPNRFSVE 383
F+ + + + D S GV++ G+ ++ Y++ A ++ P + + P GLP+ +++
Sbjct: 193 FKMMEMFGLVEKDFSSVEGVSMEPGTFNVFPCYQLHKDALVSQPTRYLHPEGLPSDYTIS 252
Query: 384 GTFNARGQ--RRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQGSRA-----VFKSPEL 536
F + P++L + ++++ L +IL + + F+ PE+
Sbjct: 253 FLFRILPDTPQEPFALWEILNKNSDPLVGVILDNGGKTLTYFNYDQSGDFQTLTFEGPEI 312
Query: 537 ---FTTGWHKLHVAVANRSVHIAVDCVELNPVNISA 635
F +HKLH+ V+ V + +DC ++ ++A
Sbjct: 313 RKIFYGSFHKLHIVVSETLVKVVIDCKQVGEKAMNA 348
>AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 chain
protein.
Length = 1143
Score = 41.1 bits (92), Expect = 0.003
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Frame = +3
Query: 300 YRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLIL 467
+++G + + ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 77 FKLGSALLIRDTMYKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVV 136
Query: 468 MPEPRKVAVLVQGSRA-----VFKSPE---LFTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ E LF WHKL +++ ++ + + +DC
Sbjct: 137 DGGKKVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 190
>M63597-1|AAA58468.1| 599|Homo sapiens fibril-associated collagen
protein.
Length = 599
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 55 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 114
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 115 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 164
>D38163-1|BAA07368.1| 1142|Homo sapiens a1(XIX) collagen chain
precursor protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 40.3 bits (90), Expect = 0.006
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Frame = +3
Query: 312 GGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQRRPWSLLRA--RSNNVLFSLILMPEP 479
G A L ++FP GLP +SV F R ++ W L + + N S+++
Sbjct: 80 GSALLIRDTIKIFPKGLPEEYSVAAMFRVRRNAKKERWFLWQVLNQQNIPQISIVVDGGK 139
Query: 480 RKVAVLVQGSRA-----VFKSPEL---FTTGWHKLHVAVANRSVHIAVDC 605
+ V + Q + +F++ EL F WHKL +++ ++ + + +DC
Sbjct: 140 KVVEFMFQATEGDVLNYIFRNRELRPLFDRQWHKLGISIQSQVISLYMDC 189
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 37.1 bits (82), Expect = 0.052
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Frame = +3
Query: 240 DRSDTTGVTLVQGSQD--LQMAYRIGGGANLTLPLKEVFPGGLPNRFSVEGTFNAR--GQ 407
D D V + G ++ Q +Y G + ++VFP GLP+ ++ TF R +
Sbjct: 247 DLMDLFSVKEILGKRENGAQSSYVRMGSFPVVQSTEDVFPQGLPDEYAFVTTFRFRKTSR 306
Query: 408 RRPWSLLRARSNNVL--FSLILMPEPRKVAVLVQGS-----RAVFKSP---ELFTTGWHK 557
+ W + + + S+ L E + V G+ R VF+ +LF WHK
Sbjct: 307 KEDWYIWQVIDQYGIPQVSIRLDGENKAVEYNAVGAMKDAVRVVFRGSRVNDLFDRDWHK 366
Query: 558 LHVAVANRSVHIAVDC 605
+ +++ ++V + +DC
Sbjct: 367 MALSIQAQNVSLHIDC 382
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 36.3 bits (80), Expect = 0.091
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +3
Query: 408 RRPWSLLRARSNNVL--FSLILMPEPRKVAVLVQGS-----RAVFKSPELFTTGWHKLHV 566
++ W L + N SL + + R + + QG +F P+LF WHKL +
Sbjct: 4 QKTWYLFQVTDANGYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLML 63
Query: 567 AVANRSVHIAVDC 605
+VA R + VDC
Sbjct: 64 SVAGRVASVHVDC 76
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 35.9 bits (79), Expect = 0.12
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +3
Query: 297 AYRIGGGANLTLPLKEVFP-GGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMP 473
A+RIG + L +P E+FP G P FS+ RGQ S+L + + + +
Sbjct: 64 AFRIGQASTLGIPTWELFPEGHFPENFSL--LITLRGQPANQSVLLSIYDERGARQLGLA 121
Query: 474 EPRKVAVLVQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDCVELNPV 623
+ +L R + + L WH++ V++ V + DC PV
Sbjct: 122 LGPALGLLGDPFRPLPQQVNLTDGRWHRVAVSIDGEMVTLVADCEAQPPV 171
>BC021197-1|AAH21197.2| 583|Homo sapiens C21orf29 protein protein.
Length = 583
Score = 32.7 bits (71), Expect = 1.1
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Frame = +3
Query: 198 SDFQTVALIAVYRLDRSDTTGVTLVQ--GSQDLQMAYRIGGGANLTLPLKEVFPGG--LP 365
SD + + ++A T+G+ +VQ G++ LQ++ + ++ P +F P
Sbjct: 12 SDLRPLDILAEVVPSDGATSGIRIVQVHGARGLQLS--VAAPRTMSFPASRIFSQCDLFP 69
Query: 366 NRFSVEGTF---NARGQRRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQGS------R 512
FS+ T N +R + L + S+ +L L L P L + + R
Sbjct: 70 EEFSIVVTLRVPNLPPKRNEYLLTVVAEESDLLLLGLRLSPAQLHFLFLREDTAGAWQTR 129
Query: 513 AVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
F+SP L WH L +AV+ + DC
Sbjct: 130 VSFRSPALVDGRWHTLVLAVSAGVFSLTTDC 160
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/96 (18%), Positives = 40/96 (41%)
Frame = +3
Query: 318 ANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPRKVAVL 497
A + P ++ P L F++ + + N + + L+P +K+ V
Sbjct: 88 AYIETPFVKILPVNLGQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLP--KKLVVH 145
Query: 498 VQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
++G + + + WH + + N+SV + V+C
Sbjct: 146 IRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVEC 181
>BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein.
Length = 846
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/96 (18%), Positives = 40/96 (41%)
Frame = +3
Query: 318 ANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPRKVAVL 497
A + P ++ P L F++ + + N + + L+P +K+ V
Sbjct: 88 AYIETPFVKILPVNLGQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLP--KKLVVH 145
Query: 498 VQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
++G + + + WH + + N+SV + V+C
Sbjct: 146 IRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVEC 181
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/96 (18%), Positives = 40/96 (41%)
Frame = +3
Query: 318 ANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPRKVAVL 497
A + P ++ P L F++ + + N + + L+P +K+ V
Sbjct: 88 AYIETPFVKILPVNLGQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLP--KKLVVH 145
Query: 498 VQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
++G + + + WH + + N+SV + V+C
Sbjct: 146 IRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVEC 181
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/96 (18%), Positives = 40/96 (41%)
Frame = +3
Query: 318 ANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPRKVAVL 497
A + P ++ P L F++ + + N + + L+P +K+ V
Sbjct: 88 AYIETPFVKILPVNLGQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLP--KKLVVH 145
Query: 498 VQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
++G + + + WH + + N+SV + V+C
Sbjct: 146 IRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVEC 181
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/96 (18%), Positives = 40/96 (41%)
Frame = +3
Query: 318 ANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPRKVAVL 497
A + P ++ P L F++ + + N + + L+P +K+ V
Sbjct: 88 AYIETPFVKILPVNLGQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLP--KKLVVH 145
Query: 498 VQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
++G + + + WH + + N+SV + V+C
Sbjct: 146 IRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVEC 181
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/96 (18%), Positives = 40/96 (41%)
Frame = +3
Query: 318 ANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPRKVAVL 497
A + P ++ P L F++ + + N + + L+P +K+ V
Sbjct: 88 AYIETPFVKILPVNLGQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLP--KKLVVH 145
Query: 498 VQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
++G + + + WH + + N+SV + V+C
Sbjct: 146 IRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVEC 181
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/96 (18%), Positives = 40/96 (41%)
Frame = +3
Query: 318 ANLTLPLKEVFPGGLPNRFSVEGTFNARGQRRPWSLLRARSNNVLFSLILMPEPRKVAVL 497
A + P ++ P L F++ + + N + + L+P +K+ V
Sbjct: 88 AYIETPFVKILPVNLGQPFTILTGLQSHRVNNAFLFSIRNKNRLQLGVQLLP--KKLVVH 145
Query: 498 VQGSRAVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
++G + + + WH + + N+SV + V+C
Sbjct: 146 IRGKQPAVFNYSVHDEQWHSFAITIRNQSVSMFVEC 181
>AJ487962-1|CAD32309.1| 669|Homo sapiens TSP-EAR protein protein.
Length = 669
Score = 31.5 bits (68), Expect = 2.6
Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 15/151 (9%)
Frame = +3
Query: 198 SDFQTVALIAVYRLDRSDTTGVTLVQ--GSQDLQMAYRIGGGANLTLPLKEVFPGG--LP 365
+D + + ++A T+G+ +VQ G++ LQ++ + ++ P +F P
Sbjct: 27 TDLRPLDILAEVVPSDGATSGIRIVQVHGARGLQLS--VAAPRTMSFPASRIFSQCDLFP 84
Query: 366 NRFSVEGTF---NARGQRRPWSL--LRARSNNVLFSLILMPEPRKVAVLVQGS------R 512
FS+ T N +R + L + S+ +L L L P L + + R
Sbjct: 85 EEFSIVVTLRVPNLPPKRNEYLLTVVAEESDLLLLGLRLSPAQLHFLFLREDTAGAWQTR 144
Query: 513 AVFKSPELFTTGWHKLHVAVANRSVHIAVDC 605
F+SP L WH L +AV+ + DC
Sbjct: 145 VSFRSPALVDGRWHTLVLAVSAGVFSLTTDC 175
>U66580-1|AAC51303.1| 349|Homo sapiens putative G protein-coupled
receptor protein.
Length = 349
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 63 TTMFF--WLPYVLVF-LSILFSYSNGQADNFTTMAPFARSFCS 182
T++F+ WLPY++ F L +SN A TT + SFC+
Sbjct: 258 TSVFYILWLPYIIYFLLESSTGHSNRFASFLTTWLAISNSFCN 300
>BC067534-1|AAH67534.2| 349|Homo sapiens G protein-coupled receptor
21 protein.
Length = 349
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 63 TTMFF--WLPYVLVF-LSILFSYSNGQADNFTTMAPFARSFCS 182
T++F+ WLPY++ F L +SN A TT + SFC+
Sbjct: 258 TSVFYILWLPYIIYFLLESSTGHSNRFASFLTTWLAISNSFCN 300
>BC067533-1|AAH67533.2| 349|Homo sapiens G protein-coupled receptor
21 protein.
Length = 349
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 63 TTMFF--WLPYVLVF-LSILFSYSNGQADNFTTMAPFARSFCS 182
T++F+ WLPY++ F L +SN A TT + SFC+
Sbjct: 258 TSVFYILWLPYIIYFLLESSTGHSNRFASFLTTWLAISNSFCN 300
>BC067532-1|AAH67532.2| 349|Homo sapiens G protein-coupled receptor
21 protein.
Length = 349
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 63 TTMFF--WLPYVLVF-LSILFSYSNGQADNFTTMAPFARSFCS 182
T++F+ WLPY++ F L +SN A TT + SFC+
Sbjct: 258 TSVFYILWLPYIIYFLLESSTGHSNRFASFLTTWLAISNSFCN 300
>BC066886-1|AAH66886.2| 349|Homo sapiens G protein-coupled receptor
21 protein.
Length = 349
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 63 TTMFF--WLPYVLVF-LSILFSYSNGQADNFTTMAPFARSFCS 182
T++F+ WLPY++ F L +SN A TT + SFC+
Sbjct: 258 TSVFYILWLPYIIYFLLESSTGHSNRFASFLTTWLAISNSFCN 300
>BC066885-1|AAH66885.2| 349|Homo sapiens G protein-coupled receptor
21 protein.
Length = 349
Score = 30.3 bits (65), Expect = 6.0
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 63 TTMFF--WLPYVLVF-LSILFSYSNGQADNFTTMAPFARSFCS 182
T++F+ WLPY++ F L +SN A TT + SFC+
Sbjct: 258 TSVFYILWLPYIIYFLLESSTGHSNRFASFLTTWLAISNSFCN 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,560,179
Number of Sequences: 237096
Number of extensions: 2024214
Number of successful extensions: 8464
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 8276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8417
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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