Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a01r
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D57655 Cluster: PREDICTED: similar to CG1962-PA,...    46   8e-04
UniRef50_UPI00015B46C5 Cluster: PREDICTED: hypothetical protein;...    45   0.002
UniRef50_Q9VIK6 Cluster: CG1962-PA, isoform A; n=2; Sophophora|R...    43   0.010
UniRef50_Q17EI5 Cluster: Putative uncharacterized protein; n=1; ...    42   0.017
UniRef50_UPI0000519FE6 Cluster: PREDICTED: similar to CG1962-PA,...    41   0.029
UniRef50_A1ZRA0 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_UPI00006CAF4E Cluster: hypothetical protein TTHERM_0068...    33   7.8  
UniRef50_Q8IAY8 Cluster: Putative uncharacterized protein PF08_0...    33   7.8  

>UniRef50_UPI0000D57655 Cluster: PREDICTED: similar to CG1962-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG1962-PA, isoform A - Tribolium castaneum
          Length = 707

 Score = 46.4 bits (105), Expect = 8e-04
 Identities = 20/33 (60%), Positives = 27/33 (81%)
 Frame = -1

Query: 698 WDIKQSTASQEIHKLRKLELSYAEVLRNADKTK 600
           ++ + S ASQE+HKL+KL+LSYAEV+R AD  K
Sbjct: 667 FEFRPSLASQELHKLKKLDLSYAEVVRKADSKK 699


>UniRef50_UPI00015B46C5 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 781

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 22/43 (51%), Positives = 30/43 (69%)
 Frame = -1

Query: 728 YQGWNPETDTWDIKQSTASQEIHKLRKLELSYAEVLRNADKTK 600
           + G   E  T   K+ TAS+E+ KLR+LE+SYAEVLR  +K+K
Sbjct: 722 HPGSATEAGTESYKRGTASEEVAKLRRLEMSYAEVLRMPNKSK 764


>UniRef50_Q9VIK6 Cluster: CG1962-PA, isoform A; n=2; Sophophora|Rep:
           CG1962-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 790

 Score = 42.7 bits (96), Expect = 0.010
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = -1

Query: 683 STASQEIHKLRKLELSYAEVLRNAD 609
           +T SQ++HKL+KL+LSYAEVLR AD
Sbjct: 734 NTVSQDLHKLKKLDLSYAEVLRRAD 758


>UniRef50_Q17EI5 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 778

 Score = 41.9 bits (94), Expect = 0.017
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = -1

Query: 764 PTPSVSG--RTGKIYQGWNPETDTWDIKQSTASQEIHKLRKLELSYAEVLRNADKTKTRR 591
           PTP+ S   R+G+ ++     T       + ++  +HKL+KL+LSYAEVLR AD  K   
Sbjct: 713 PTPNASSSQRSGQTFRSSTASTT------AGSASNLHKLKKLDLSYAEVLRRADHCKHHS 766

Query: 590 KKHQ 579
           ++ Q
Sbjct: 767 QRRQ 770


>UniRef50_UPI0000519FE6 Cluster: PREDICTED: similar to CG1962-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG1962-PA, isoform A - Apis mellifera
          Length = 755

 Score = 41.1 bits (92), Expect = 0.029
 Identities = 19/32 (59%), Positives = 26/32 (81%)
 Frame = -1

Query: 695 DIKQSTASQEIHKLRKLELSYAEVLRNADKTK 600
           D K STAS E+ +L++LE+SYAEVLR  +K+K
Sbjct: 717 DYKPSTASVEVARLKRLEMSYAEVLRLPNKSK 748


>UniRef50_A1ZRA0 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 397

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 719 WNPETDTW-DIKQSTASQEIHKLRKLELSYAEVLRNADKTKTRRKKH 582
           W P T +W D+  +T  Q+       EL +  +LRNADK+K+    H
Sbjct: 256 WTPGTFSWADLDNATKLQQKEIRATTELGHTFILRNADKSKSLPDVH 302


>UniRef50_UPI00006CAF4E Cluster: hypothetical protein
           TTHERM_00686200; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00686200 - Tetrahymena
           thermophila SB210
          Length = 1391

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +1

Query: 313 VC*NRYRVC*IYKNIFIYSYLYRAVTNSGFVLWQSTNRGYNSIGINSYSTRSQN 474
           +C  + ++  +Y+N  IY  L        F  WQ +N GYN + + S+S+ SQN
Sbjct: 50  ICNTQVKLLNLYRNSIIYISL--------FCGWQKSNCGYNYLAMGSFSSISQN 95


>UniRef50_Q8IAY8 Cluster: Putative uncharacterized protein
           PF08_0070; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF08_0070 - Plasmodium
           falciparum (isolate 3D7)
          Length = 975

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
 Frame = -2

Query: 388 SQRDINKSK*IYSYIFSRHDIDFNKLPSETLRSQI*NHFAFNETRAPETLIIF--KFTTS 215
           ++ +INK K  Y  + + H  +FNK+ S + +    N++  N  + P+  II+   FT +
Sbjct: 119 NESNINKEKENYINVGTHHSYNFNKMNSHSTKKC--NNYINNNYKNPKKNIIYLTNFTVT 176

Query: 214 NSIV 203
           NS +
Sbjct: 177 NSFI 180


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,990,728
Number of Sequences: 1657284
Number of extensions: 11638735
Number of successful extensions: 26531
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26513
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)