Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a01r
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051930-1|AAK93354.1|  790|Drosophila melanogaster LD41224p pro...    43   5e-04
AE014134-3268|AAN11084.1|  790|Drosophila melanogaster CG1962-PC...    43   5e-04
AE014134-3267|AAN11083.1|  790|Drosophila melanogaster CG1962-PB...    43   5e-04
AE014134-3266|AAF53912.1|  790|Drosophila melanogaster CG1962-PA...    43   5e-04

>AY051930-1|AAK93354.1|  790|Drosophila melanogaster LD41224p
           protein.
          Length = 790

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = -1

Query: 683 STASQEIHKLRKLELSYAEVLRNAD 609
           +T SQ++HKL+KL+LSYAEVLR AD
Sbjct: 734 NTVSQDLHKLKKLDLSYAEVLRRAD 758


>AE014134-3268|AAN11084.1|  790|Drosophila melanogaster CG1962-PC,
           isoform C protein.
          Length = 790

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = -1

Query: 683 STASQEIHKLRKLELSYAEVLRNAD 609
           +T SQ++HKL+KL+LSYAEVLR AD
Sbjct: 734 NTVSQDLHKLKKLDLSYAEVLRRAD 758


>AE014134-3267|AAN11083.1|  790|Drosophila melanogaster CG1962-PB,
           isoform B protein.
          Length = 790

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = -1

Query: 683 STASQEIHKLRKLELSYAEVLRNAD 609
           +T SQ++HKL+KL+LSYAEVLR AD
Sbjct: 734 NTVSQDLHKLKKLDLSYAEVLRRAD 758


>AE014134-3266|AAF53912.1|  790|Drosophila melanogaster CG1962-PA,
           isoform A protein.
          Length = 790

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = -1

Query: 683 STASQEIHKLRKLELSYAEVLRNAD 609
           +T SQ++HKL+KL+LSYAEVLR AD
Sbjct: 734 NTVSQDLHKLKKLDLSYAEVLRRAD 758


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,481,734
Number of Sequences: 53049
Number of extensions: 521261
Number of successful extensions: 1121
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)