Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a01r
         (764 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   2.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   2.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   4.1  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 366 VNKYILIYLADTISILTNFPPKHYDHRYEIIL 271
           ++KY LI    T + L   P  HYDH  EI++
Sbjct: 29  LSKYQLI----TSTTLNWLPRTHYDHLKEIVI 56


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 409 WQS-TNRGYNSIGINSYSTRSQNKTKLYYLCPVGKDKWRLDHST 537
           W S  N G  ++    +   + N+  L+YL   G  K ++D ST
Sbjct: 496 WVSFVNNGVPNVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSST 539


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 710 ETDTWDIKQSTASQEI 663
           ETD W+++Q  A +EI
Sbjct: 240 ETDIWEVEQILAKKEI 255


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +1

Query: 409 WQS-TNRGYNSIGINSYSTRSQNKTKLYYLCPVGKDKWRLDHST 537
           W S  N G  ++    +   + N+  L+YL   G  K ++D ST
Sbjct: 496 WVSFVNNGVPNVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSST 539


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +2

Query: 461 PDHKIKLNYITY 496
           PD KI++N+IT+
Sbjct: 100 PDQKIEINFITF 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,844
Number of Sequences: 438
Number of extensions: 3712
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)