BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fner10a01f (566 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 33 0.16 03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 31 0.48 10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 31 0.64 04_04_1174 - 31473859-31474269,31476011-31476420,31477102-31477261 30 1.1 02_05_0548 + 29896648-29896701,29896818-29897021,29897451-298977... 30 1.1 08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 29 2.0 08_01_0655 + 5646567-5646650,5646675-5647697,5648227-5648382,564... 29 2.6 07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893,832... 29 2.6 06_03_1308 - 29221583-29221630,29221709-29221786,29221908-292219... 29 2.6 01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 29 2.6 04_04_1650 - 35051728-35051823,35052054-35052162,35052270-350524... 29 3.4 03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 29 3.4 02_01_0642 - 4803464-4805665,4806231-4806320 28 4.5 01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 4.5 01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 4.5 05_03_0013 + 7362056-7362471,7363235-7364081,7364272-7364758,736... 28 6.0 04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 28 6.0 04_01_0290 + 3843610-3843712,3844088-3846003 28 6.0 03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 28 6.0 09_04_0199 - 15533619-15534107,15534956-15535362,15535559-155358... 27 7.9 07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291... 27 7.9 06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 27 7.9 02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166... 27 7.9 01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 27 7.9 >09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195, 1107272-1107531,1107897-1108084,1108187-1108311, 1108485-1108521,1108802-1108893,1109023-1109133, 1109242-1109352,1109576-1109669,1109833-1109945, 1110316-1110411,1110510-1110617,1110665-1110814, 1110910-1110990,1111205-1111276,1111553-1111646, 1111759-1111787,1111870-1111967,1112065-1112160, 1112399-1112620,1113002-1113158,1113472-1113627, 1113703-1113930 Length = 1045 Score = 33.1 bits (72), Expect = 0.16 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Frame = +2 Query: 191 NEELEQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQ 370 N +LEQ + + D + L GK LLE +E + A++Q ++ + + + + Q Sbjct: 510 NRQLEQKESEMKMYGSDTVALKQHFGKKLLELEEE-KRAVQQERDRLLAEVESLN-ADGQ 567 Query: 371 TVALREVNDSRLRIYE-QLELSIQDLE 448 T LR+ +L+ E Q L IQDL+ Sbjct: 568 THKLRDAQLQKLKTLEAQYMLVIQDLD 594 >03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339, 3242494-3242836,3244138-3248540,3248928-3249107, 3249108-3250892,3251055-3252173 Length = 2727 Score = 31.5 bits (68), Expect = 0.48 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%) Frame = +2 Query: 239 DDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALRE---VNDSRLR 409 D L+ E + L ERN+EL LR + +ED L K+ L E V D+ R Sbjct: 2145 DKLRKVDEKVQFLQERNQELCRVLRDLEVAVEDAEGVKVDLEKKITTLTERGAVQDNETR 2204 Query: 410 IYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQKTV 562 + L AN+ L V+ ++ +SL S +T+ + E+ ++ + Sbjct: 2205 L----------LREANNTLQVEVGIHEQKEESLMSTFETMRKEAEQHEREI 2245 >10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313, 20878057-20878177,20878414-20878451,20879096-20879218, 20879308-20879505,20880270-20880356 Length = 1578 Score = 31.1 bits (67), Expect = 0.64 Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%) Frame = +2 Query: 149 MSEVMDLVKKKFGGNEELEQDDITSRRCMLDDLQLAAELGKTL--LERNK-ELETALRQH 319 M E L+ E++E + + M + L L L +E K EL+ + + Sbjct: 812 MDESRSLITNLKDELEQVEAQKVELKLQMDESRSLITNLKDELEQVEAQKVELKLQMDES 871 Query: 320 QNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL--AVDHAADK- 490 +++I + E+E + Q V L+E R +++ + L R+N +L VDH ++ Sbjct: 872 RSLITNLKDELEQVEAQKVELKENQLESHRRLSEVQEDSEALRRSNAKLQATVDHVVEEC 931 Query: 491 KHIKSLCSNI 520 K +++L +++ Sbjct: 932 KSLQTLTADL 941 >04_04_1174 - 31473859-31474269,31476011-31476420,31477102-31477261 Length = 326 Score = 30.3 bits (65), Expect = 1.1 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +1 Query: 154 RSNGSGEEEIRWKRRVGARRYHLTSLYARRFATGGRT 264 R+ +G RVGA ++ SL+ R++ATG RT Sbjct: 68 RARAAGRRRREDAARVGATEWYFFSLHDRKYATGQRT 104 >02_05_0548 + 29896648-29896701,29896818-29897021,29897451-29897708, 29897821-29898036,29898130-29898285,29898396-29898707, 29898795-29898882,29899055-29899203,29899390-29899722 Length = 589 Score = 30.3 bits (65), Expect = 1.1 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = +2 Query: 260 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYE--QLELS 433 +LGK ER KEL + + + + A +E Q VAL ++N+ L + + + +L Sbjct: 107 QLGKKKKERIKELANIQSRIEQIRGEIAGTLEM--GQQVALPQINEDDLTVRKLREFQLQ 164 Query: 434 IQDLERANHR 463 +Q+LE+ R Sbjct: 165 LQELEKEKSR 174 >08_02_1453 - 27199228-27200579,27200712-27202646,27202905-27202966, 27203525-27203545,27204305-27204344,27204345-27204792, 27204866-27204964,27205071-27205394,27205446-27205574, 27205657-27205875,27205976-27206194,27206436-27206669, 27206773-27206943,27207466-27207577,27207955-27208010, 27208083-27208181,27208901-27209134,27209258-27209311, 27209363-27209422 Length = 1955 Score = 29.5 bits (63), Expect = 2.0 Identities = 19/69 (27%), Positives = 32/69 (46%) Frame = +2 Query: 275 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERA 454 L E+ KEL T R+ N ++AQ ++ + LRE L + EQ + ++ Sbjct: 157 LREQTKELATFRRERDNSEAERAQHLKQIHDLQEHLREKESQMLALEEQHRAAQDNIIYK 216 Query: 455 NHRLAVDHA 481 + +L HA Sbjct: 217 DEQLREAHA 225 >08_01_0655 + 5646567-5646650,5646675-5647697,5648227-5648382, 5648499-5648529,5648636-5648808 Length = 488 Score = 29.1 bits (62), Expect = 2.6 Identities = 16/44 (36%), Positives = 25/44 (56%) Frame = +2 Query: 173 KKKFGGNEELEQDDITSRRCMLDDLQLAAELGKTLLERNKELET 304 KKKF G + L D++ L+L A+ G+ +L N+EL+T Sbjct: 337 KKKFNGGKVLGGDNVLHSLSNARSLELLADAGEVIL--NRELKT 378 >07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893, 8322190-8322264,8322784-8322846,8322934-8323086 Length = 273 Score = 29.1 bits (62), Expect = 2.6 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +2 Query: 287 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL 424 NKE ++QH + D ++EIE K + EV + L E++ Sbjct: 133 NKEYGPVIKQHMQYVLDHSEEIEKTLKVQAQVSEVKNIMLENIEKV 178 >06_03_1308 - 29221583-29221630,29221709-29221786,29221908-29221952, 29222075-29222187,29222283-29222406 Length = 135 Score = 29.1 bits (62), Expect = 2.6 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +1 Query: 157 SNGSGEEEIRWKRRVGARRYHLTSLYARRFATGGRTRENPTRTQQGTRDSPSPAS 321 S G G++++R KR A+ TS GG N + + QGT P+ S Sbjct: 41 SGGDGKQQVRIKRPKSAKALQCTSKCVATCIRGGEGPLNASGSFQGTIPQPAVLS 95 >01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015, 3714088-3714438,3714585-3714862,3714939-3715289, 3715378-3715647,3716035-3716103,3716194-3716304, 3716503-3716583,3716825-3716914,3717032-3717262 Length = 689 Score = 29.1 bits (62), Expect = 2.6 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +1 Query: 205 ARRYHLTSLYARRFATGGRTRENPTRTQQGTRDSPS 312 AR HL + RR G +N T+Q TR +PS Sbjct: 97 ARNDHLNDHFERRTEAAGSHAQNVPFTEQNTRSNPS 132 >04_04_1650 - 35051728-35051823,35052054-35052162,35052270-35052416, 35052516-35052637,35052726-35052825,35052895-35053095, 35053202-35053407,35053778-35053803,35054239-35054327, 35054427-35054635,35055577-35055672,35055754-35055924 Length = 523 Score = 28.7 bits (61), Expect = 3.4 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = +2 Query: 335 DQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 466 D+ +EY + R ND R+ E L +I LE HRL Sbjct: 111 DKLTSVEYFFTSKIRCRVGNDVHERVNELLSKAIHGLENEFHRL 154 >03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209, 420334-420502,421115-424273,424367-424485,424915-425116 Length = 1363 Score = 28.7 bits (61), Expect = 3.4 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 8/131 (6%) Frame = +2 Query: 194 EELEQDDITSRRCMLDDLQLAAELGKTLLERNK-ELETALRQHQNVIEDQAQEIEYLTKQ 370 +E + I + ++ +L+ E + +E + E + ++ Q + + + E L + Sbjct: 801 KESSELQIHDSKSLIVNLKDKVERQQAEMETQRLEFKQKQQEAQRKLSEAQDDSEVLRRS 860 Query: 371 TVALREVNDSRLRIYEQL-----ELSIQDLERANHRLAVDHAAD--KKHIKSLCSNIDTV 529 L+ +S + L EL Q LE H + D KK C ++ + Sbjct: 861 NSKLQSTVESLIEECSSLQNQIAELKRQKLELHGHLTQQEQELDNSKKRNLDFCKTVEFL 920 Query: 530 EAKCEELQKTV 562 EAK LQK + Sbjct: 921 EAKLSSLQKDI 931 >02_01_0642 - 4803464-4805665,4806231-4806320 Length = 763 Score = 28.3 bits (60), Expect = 4.5 Identities = 18/87 (20%), Positives = 43/87 (49%) Frame = +2 Query: 290 KELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLA 469 + ++ A+++ + + + + + + + V L+++ DS+ Q+ +QD E+ H Sbjct: 477 ESIQIAVQEKDSELSETQRRLAEVNSEVVELKQLLDSKEDQLVQVRTELQDKEQ--HIQT 534 Query: 470 VDHAADKKHIKSLCSNIDTVEAKCEEL 550 + + D +K CS ++V K EL Sbjct: 535 LQNKLDS--MKFSCSQAESVVQKIAEL 559 >01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955, 26699321-26699416 Length = 1515 Score = 28.3 bits (60), Expect = 4.5 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 2/92 (2%) Frame = +2 Query: 191 NEELEQDDITSRRCMLDDLQ--LAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLT 364 NEEL ++ I+S L++ + L E+ K E+ + L+ L+Q I+ +E+E Sbjct: 868 NEEL-REKISSLERQLEEARSKLQDEIIKLQGEKERALDN-LQQSNTSIKTFEEELEKQR 925 Query: 365 KQTVALREVNDSRLRIYEQLELSIQDLERANH 460 + L+ ND + LE ++D + ++H Sbjct: 926 EHNSILQLANDDLHKSIANLEKELEDTKVSSH 957 Score = 27.5 bits (58), Expect = 7.9 Identities = 17/70 (24%), Positives = 33/70 (47%) Frame = +2 Query: 233 MLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRI 412 M ++L + E L + ++LE L+ ++ +E + ++ L + LRE S R Sbjct: 822 MYNELTVCQEEKNAALLQVQQLEANLKNLESELEQKQSQVSALEQANEELREKISSLERQ 881 Query: 413 YEQLELSIQD 442 E+ +QD Sbjct: 882 LEEARSKLQD 891 >01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793, 4211857-4212145 Length = 815 Score = 28.3 bits (60), Expect = 4.5 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +2 Query: 269 KTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLE 427 KT+ N+ELE ++Q Q E + L + T +L E+N S L + ++LE Sbjct: 628 KTVTTLNRELEALVKQLQMDSEARKALEADLDEATKSLDEMNRSALSLSKELE 680 >05_03_0013 + 7362056-7362471,7363235-7364081,7364272-7364758, 7365062-7365126,7365275-7365643 Length = 727 Score = 27.9 bits (59), Expect = 6.0 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%) Frame = +2 Query: 275 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVAL----REVNDSRLRIYEQLELSIQD 442 LL R KELE + HQ V ++A + L + L ++V +R E+ ++Q+ Sbjct: 492 LLARRKELEKLVLSHQEVSRERAISEDKLKARISDLEKEKKQVEFARQAEEEKTTSALQE 551 Query: 443 LERANHRL 466 L+ A +L Sbjct: 552 LDNARQQL 559 >04_04_0076 + 22558105-22558261,22558356-22558405,22559837-22560044, 22560112-22560237,22560469-22560567,22560729-22561405, 22561483-22561731,22561808-22561936,22562021-22562089, 22562183-22562256,22563086-22563098,22563361-22563468, 22563541-22563651,22563725-22563811,22564043-22564068, 22564840-22564906,22565123-22565212,22565295-22565387, 22565515-22565604,22565699-22565761,22566349-22566447 Length = 894 Score = 27.9 bits (59), Expect = 6.0 Identities = 25/97 (25%), Positives = 41/97 (42%) Frame = +2 Query: 260 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 439 EL ++E K E + QH + +I L + E++ S + QLE Sbjct: 367 ELKSRIIELQKTQEIVMVQHVEECQVAEDKIRRLESEA----EISASNI---SQLEKVAS 419 Query: 440 DLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEEL 550 DLE +L D + + H + L I +E+ +EL Sbjct: 420 DLEGRVQKLLEDSRSAENHKQELLQKILKLESDNQEL 456 >04_01_0290 + 3843610-3843712,3844088-3846003 Length = 672 Score = 27.9 bits (59), Expect = 6.0 Identities = 21/98 (21%), Positives = 48/98 (48%) Frame = +2 Query: 260 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQ 439 E+ ++L N +L + + A E+E L K+ VAL EV + + + Sbjct: 93 EVERSLKGENDKLRLEVLTAEEKYSQSAAEVEKLQKELVALAEVKEVAAKAF-------- 144 Query: 440 DLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEELQ 553 D E+A ++ ++ K ++ + N+D ++++ ++L+ Sbjct: 145 DDEKA--KMMMESVDLKSRLEEIQGNMDMIKSENDKLR 180 >03_05_0640 - 26326832-26327166,26327295-26327529,26327665-26327908, 26328389-26328507,26328860-26329050,26329133-26329220, 26331653-26331715,26331816-26333944,26334084-26334186 Length = 1168 Score = 27.9 bits (59), Expect = 6.0 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 Query: 197 ELEQDDITSRRCMLDDLQLAAELGKTLLERNKEL 298 ++EQ+DIT + ++DD LA EL + E + E+ Sbjct: 488 DVEQEDITDKGDVIDDGFLAEELNVEMPEEDAEM 521 >09_04_0199 - 15533619-15534107,15534956-15535362,15535559-15535862, 15537061-15538397,15539463-15539727 Length = 933 Score = 27.5 bits (58), Expect = 7.9 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +2 Query: 284 RNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSR 403 RN++LE + Q NV+ Q +EI + T + R++N ++ Sbjct: 385 RNRQLELSTFQIINVVGSQLKEIGFWTAKHGIFRQLNKNK 424 >07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922, 2916053-2916113,2916243-2916365,2916505-2916537, 2916617-2916709,2916839-2916934,2917025-2917203, 2917344-2917530,2918051-2918184,2918311-2918518, 2918598-2918633,2918785-2919241,2919633-2919736, 2920489-2920569,2920646-2920697,2920837-2920876, 2920991-2921085,2921241-2921383,2921899-2922006, 2922120-2922221,2922302-2922348,2922425-2922554, 2923173-2923304,2923404-2923616,2923709-2923963, 2924053-2924799 Length = 1460 Score = 27.5 bits (58), Expect = 7.9 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = +2 Query: 272 TLLERNKELETALRQHQNVIEDQAQEIEYLTK--QTVALREVNDSRLRIYEQLELSIQDL 445 T L+ LET QH ++I + ++ TK QT+ R I ++ ++ + L Sbjct: 1282 TFLKAFNFLETHFGQHNDIILQMIKSLQKATKTIQTICAEAKGHKRTMITSKIPVAKRSL 1341 Query: 446 ER 451 ER Sbjct: 1342 ER 1343 >06_03_0672 + 23359510-23361253,23389969-23390203,23392078-23392234, 23392535-23392597 Length = 732 Score = 27.5 bits (58), Expect = 7.9 Identities = 11/52 (21%), Positives = 29/52 (55%) Frame = +2 Query: 311 RQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 466 R+ ++ + + + ++ L + V+ ++ + + +LE ++DLER+N L Sbjct: 645 RRGRSPADKEHRRLKRLLRNRVSAQQARERKKAYMSELEARVKDLERSNSEL 696 >02_05_0110 + 25914110-25915006,25915726-25915797,25916411-25916699, 25916864-25916949,25917267-25917490,25917674-25917740, 25917830-25917889,25917995-25918078,25918475-25918555 Length = 619 Score = 27.5 bits (58), Expect = 7.9 Identities = 16/67 (23%), Positives = 30/67 (44%) Frame = +2 Query: 209 DDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALRE 388 D+ R+ Q E G ++ K+ ETA++ + +E ++I YLT + E Sbjct: 238 DEEKERKERKSSAQKEKEAGNAAYKK-KDFETAIQHYTKAMELDDEDISYLTNRAAVYIE 296 Query: 389 VNDSRLR 409 + L+ Sbjct: 297 MGKRLLK 303 >01_06_1763 + 39723596-39723691,39724030-39724672,39724773-39725275, 39725786-39725905,39726356-39726421,39727146-39727256, 39727650-39727726,39727996-39728063,39728384-39728497, 39728593-39728774,39728926-39728994,39729294-39729449, 39729657-39729734 Length = 760 Score = 27.5 bits (58), Expect = 7.9 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 4/123 (3%) Frame = +2 Query: 203 EQDDITSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIED----QAQEIEYLTKQ 370 + DD + +++DL + LE+++EL L + + D QAQ I LT Sbjct: 405 KDDDFAALEQLIEDLTKEKFALQRTLEKSQELAQTLATDNSALTDKFNQQAQVISNLTSD 464 Query: 371 TVALREVNDSRLRIYEQLELSIQDLERANHRLAVDHAADKKHIKSLCSNIDTVEAKCEEL 550 L+ ++L E + E AN +L +AAD++ K L + + +E K L Sbjct: 465 MERLQNEIQAQLLALESVR-----TEYANAQLEC-NAADER-AKVLAAEVILLEDKALRL 517 Query: 551 QKT 559 + + Sbjct: 518 RSS 520 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,152,078 Number of Sequences: 37544 Number of extensions: 275918 Number of successful extensions: 854 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 832 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 854 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1305140760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -