Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1h09r
         (529 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420           30   1.0  
01_01_0510 - 3723983-3724416,3724895-3725766,3725797-3726791,372...    30   1.3  
12_02_0393 - 18550972-18551562,18551864-18552005,18552164-185523...    29   2.3  
03_05_0632 + 26264150-26264195,26266139-26266623,26266650-262667...    28   4.0  
11_06_0410 - 23223701-23223714,23223863-23225159,23225314-232262...    27   7.1  
04_03_0690 + 18751601-18753667                                         27   7.1  
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857...    27   9.3  

>08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420
          Length = 647

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 440 DDHRPQQKTARVHYTCVYLTTSVGSC 517
           D++  QQK ARV +TC+ + +  G+C
Sbjct: 24  DENTRQQKLARVEFTCLDIVSDPGTC 49


>01_01_0510 -
           3723983-3724416,3724895-3725766,3725797-3726791,
           3727332-3727439
          Length = 802

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 314 ERIIVVPVSEPVRSTRHR*RIVILYSDLELLRLEQLGETDHPDDHRPQQKTARV 475
           ++I+VV    P + ++ R RIV     L+L     L  T H D H+P   TA +
Sbjct: 336 QKIVVVDHELPNQGSQQR-RIVSFVGGLDLCDGRTLDSTHHDDFHQPNFATASI 388


>12_02_0393 -
           18550972-18551562,18551864-18552005,18552164-18552382,
           18552733-18552828,18552923-18553035,18553299-18553510,
           18553603-18553700,18554283-18554314,18554984-18555068,
           18555853-18555914
          Length = 549

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 388 IEYDNSLPMTGGSDRFRHRNNYDPFYVTVNATVKKGFVISY 266
           +EY    P+    DR  HR N + F V  +  +K G+  S+
Sbjct: 164 VEYVLKFPLHSTLDRLEHRRNIEQFKVEGSKVLKSGYCGSH 204


>03_05_0632 +
           26264150-26264195,26266139-26266623,26266650-26266739,
           26266821-26267189
          Length = 329

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +2

Query: 272 DHEAFLDCRVDCDVERIIVVPVSEPVRSTRH 364
           D   F   +  CD E ++VVPV E V +  H
Sbjct: 59  DDATFFSFQELCDTEEVVVVPVQEEVITEAH 89


>11_06_0410 -
           23223701-23223714,23223863-23225159,23225314-23226225,
           23226952-23227023,23227323-23227471,23227879-23227912
          Length = 825

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = -1

Query: 208 GQSGSKSVAFQLVSNHSDFLAYSYLTYGIREEEYRKIKNIISLPMTNNGIKLNQNWLAIS 29
           G +G+KS     + N      Y YL YG   ++ RK  +I+ +    + + L++ W   S
Sbjct: 272 GANGNKSNFNPEICNPETMEGYKYLVYG-ELQKSRKSAHILKVEDLKSLVTLDKIWRCDS 330

Query: 28  MFIFT 14
             + T
Sbjct: 331 ALLLT 335


>04_03_0690 + 18751601-18753667
          Length = 688

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
 Frame = +2

Query: 371 RIVILYSDL--ELLRLEQLGETDHPDDHR 451
           R++++YSD   +LL  +  G+ DH D HR
Sbjct: 448 RLLVVYSDTLDKLLGDDSAGDVDHSDTHR 476


>11_06_0634 -
           25685216-25685329,25685407-25685511,25685681-25685740,
           25685827-25685965,25686056-25686240,25686328-25686411,
           25686499-25686621,25687088-25687267,25687364-25687433,
           25687520-25687616,25687695-25687770,25688259-25688348,
           25688383-25688529,25688647-25688715,25689004-25689177,
           25689266-25689336,25689409-25689557,25690723-25690774,
           25690865-25691120,25691196-25691287,25691420-25691541,
           25691909-25692679,25692883-25692940,25693068-25693107,
           25694462-25694595,25694685-25694793,25694896-25694991
          Length = 1220

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -2

Query: 333 GTTMILSTSQSTRQSRKAS*SHI*KLQQQ*TPWVKWISTSSE 208
           G    ++  +S+R+ ++       + QQQ TPW K +S SS+
Sbjct: 72  GDKAAVAVVESSRKKKEQQQQQQQQQQQQATPWAKLLSQSSQ 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,460,463
Number of Sequences: 37544
Number of extensions: 263679
Number of successful extensions: 796
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)