Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1h09f
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ857894-1|ABG77979.1|  499|Homo sapiens neuregulin 3 protein.         32   1.6  
DQ001411-1|AAY17216.1|  696|Homo sapiens neuregulin-3 protein.         32   1.6  
AL589782-1|CAI17213.1|  713|Homo sapiens neuregulin 3 protein.         32   1.6  
AL513204-1|CAH73645.1|  713|Homo sapiens neuregulin 3 protein.         32   1.6  
AL391478-1|CAI15622.1|  713|Homo sapiens neuregulin 3 protein.         32   1.6  
AL354749-1|CAH70641.1|  713|Homo sapiens neuregulin 3 protein.         32   1.6  
AL136085-1|CAH71050.1|  713|Homo sapiens neuregulin 3 protein.         32   1.6  
AL096706-1|CAI22410.1|  713|Homo sapiens neuregulin 3 protein.         32   1.6  

>DQ857894-1|ABG77979.1|  499|Homo sapiens neuregulin 3 protein.
          Length = 499

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 132 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 183


>DQ001411-1|AAY17216.1|  696|Homo sapiens neuregulin-3 protein.
          Length = 696

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 353 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 404


>AL589782-1|CAI17213.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 353 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 404


>AL513204-1|CAH73645.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 353 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 404


>AL391478-1|CAI15622.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 353 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 404


>AL354749-1|CAH70641.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 353 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 404


>AL136085-1|CAH71050.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 353 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 404


>AL096706-1|CAI22410.1|  713|Homo sapiens neuregulin 3 protein.
          Length = 713

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +1

Query: 28  SSQIYAR-IMYASCLLLGTVIVGVVSFPQLFETKKFKIGIEYDNSLPMTGGS 180
           S ++Y R ++  SC++ G VIVG+      F++KK    I+    +P  G S
Sbjct: 353 SEEVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEQLKVPQNGKS 404


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,054,197
Number of Sequences: 237096
Number of extensions: 1438857
Number of successful extensions: 10457
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10457
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)