Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1h09f
(561 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.8
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 8.5
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 8.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 8.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 8.5
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.5
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 21 8.5
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.4 bits (48), Expect = 1.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 119 SNSWGKLTTPTITVPSRR 66
SN+ +TT T T+P+RR
Sbjct: 248 SNATAAMTTGTTTIPTRR 265
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 155 LSYSIPILNFFVSNSW 108
L + +P+L F SNSW
Sbjct: 296 LQFLVPMLQGFPSNSW 311
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 2.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2
Query: 155 LSYSIPILNFFVSNSW 108
L + +P+L F SNSW
Sbjct: 264 LQFLVPMLQGFPSNSW 279
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 94 YNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 94 YNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 94 YNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 94 YNNNYKPLYYNIN 106
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 193 HRNNYDPFYVTVNATVKKGFVISYLE 270
H NNY Y N K + I+Y+E
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 193 HRNNYDPFYVTVNATVKKGFVISYLE 270
H NNY Y N K + I+Y+E
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 193 HRNNYDPFYVTVNATVKKGFVISYLE 270
H NNY Y N K + I+Y+E
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 193 HRNNYDPFYVTVNATVKKGFVISYLE 270
H NNY Y N K + I+Y+E
Sbjct: 91 HNNNYKYNYNNNNYNKKLYYNINYIE 116
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -1
Query: 93 PDDHRPQQKTARVHYTCVYLTTSVGSCV 10
PD+ P++ R +Y V + SCV
Sbjct: 462 PDNFLPEKTANRHYYAFVPFSAGPRSCV 489
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 327 YNNNYKPLYYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 327 YNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 327 YNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 8.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 193 HRNNYDPFYVTVN 231
+ NNY P Y +N
Sbjct: 316 YNNNYKPLYYNIN 328
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +3
Query: 474 TQPKLARDFNVYFYLFTQCYIKINCITI 557
T PKLAR YL T ++ C +
Sbjct: 677 TNPKLARSVLYKIYLNTMESHEVRCTAV 704
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.0 bits (42), Expect = 8.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 361 SNHSDFLAYSYLTYGIREEEYRKIKNIISLPMTNNG 468
+ ++DFL + + EE KI +++ NNG
Sbjct: 209 AEYTDFLKSVPIFKNLPEETLIKISDVLEETFYNNG 244
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,321
Number of Sequences: 438
Number of extensions: 3197
Number of successful extensions: 22
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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