Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1h08f
(745 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual 64 3e-11
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 41 2e-04
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 41 2e-04
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 38 0.002
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 36 0.008
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 36 0.008
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 35 0.011
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 35 0.011
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 35 0.011
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 35 0.011
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 33 0.033
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 33 0.033
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 33 0.057
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 32 0.075
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 32 0.099
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 31 0.23
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 31 0.23
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 31 0.23
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 31 0.23
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 30 0.30
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 30 0.40
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 30 0.40
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 30 0.40
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 30 0.40
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 30 0.40
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 0.50
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 29 0.53
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 29 0.53
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 29 0.53
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 29 0.70
SPAC227.07c |pab1||protein phosphatase regulatory subunit Pab1|S... 29 0.70
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 0.70
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 29 0.92
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 29 0.92
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 29 0.92
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 29 0.92
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 29 0.92
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 28 1.2
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 28 1.2
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 28 1.2
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 28 1.2
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 28 1.6
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 2.1
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 27 2.1
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 27 2.8
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 27 2.8
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 2.8
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 2.8
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 27 3.7
SPAC12B10.03 |||WD repeat protein, human WDR20 family|Schizosacc... 27 3.7
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 26 4.9
SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz... 26 4.9
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 4.9
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 26 4.9
SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 6.5
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 26 6.5
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster... 26 6.5
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 25 8.6
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 8.6
>SPCC18.13 |||tRNA |Schizosaccharomyces pombe|chr 3|||Manual
Length = 421
Score = 63.7 bits (148), Expect = 3e-11
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +3
Query: 456 QTIDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGT 635
Q E+ IIT D+DE IRIS +PN + IE +CLGH++FV + + N LIS GD
Sbjct: 191 QNSKEEIIITSDKDEHIRISRFPNAFVIEGFCLGHEDFVSRMSLYDN--RTLISGGGDNH 248
Query: 636 VKLWD 650
V +WD
Sbjct: 249 VFVWD 253
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 41.1 bits (92), Expect = 2e-04
Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 5/198 (2%)
Frame = +3
Query: 72 FSVNDNFIVAARNLLLDYYDYHTHKIITLSTSEET--ENDCIV-DITVSGDQKYIAVITS 242
FS + F+ N ++ T K+ITL E + E D V + S D KY+A
Sbjct: 295 FSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLATGVE 354
Query: 243 ISKNLVVFSSCLEILKKIILPRSAS--KIRFTQNNKHILVADKSGDALLYNLEDEGKSGX 416
+ + ++ + + +++ + F+++ K ++ SGD + + E
Sbjct: 355 -DQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSG--SGDRTVCLWDVEAGEQK 411
Query: 417 XXXXXXXXXXXXXQTIDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPN 596
+ D ++I D+ IRI T + + GH+E V ++ P+
Sbjct: 412 LILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLH--GHEESVYSVAFSPD 469
Query: 597 NYNYLISTSGDGTVKLWD 650
YL+S S D T+KLW+
Sbjct: 470 G-KYLVSGSLDNTIKLWE 486
Score = 34.7 bits (76), Expect = 0.014
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRI--SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTV 638
D KY+ T D++IRI Y + T GH++ + +++ + L+S SGD TV
Sbjct: 345 DGKYLATGVEDQQIRIWDIAQKRVYRLLT---GHEQEIYSLDFSKDGKT-LVSGSGDRTV 400
Query: 639 KLWDYVKGQ 665
LWD G+
Sbjct: 401 CLWDVEAGE 409
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/67 (29%), Positives = 38/67 (56%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D KY++T D +I++ +T + GH++ + +++ +N +++S SGD T +L
Sbjct: 371 DGKYLVTGTEDRQIKLWDL-STQKVRYVFSGHEQDIYSLDF-SHNGRFIVSGSGDRTARL 428
Query: 645 WDYVKGQ 665
WD GQ
Sbjct: 429 WDVETGQ 435
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +3
Query: 465 DEKYIITCDRDE-KIRISCYPNTYNIETYC--LGHKEFVKNIEILPNNYNYLISTSGDGT 635
D+K ++ D ++ RI Y + YC GH++ V + + PN ++ ++S DGT
Sbjct: 19 DQKGVVEEDEEQIHKRIRNYESHSGFSEYCTLFGHEKSVTCVSVSPNK-RWIATSSSDGT 77
Query: 636 VKLW 647
+K+W
Sbjct: 78 IKIW 81
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 35.5 bits (78), Expect = 0.008
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKG 662
GH V ++ P N L S+S D T+KLWD KG
Sbjct: 132 GHSRKVGLVQYHPTAANVLASSSADNTIKLWDCEKG 167
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 35.5 bits (78), Expect = 0.008
Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 7/157 (4%)
Frame = +3
Query: 198 ITVSGDQKYIA----VITSISKNLVVFS-SCLEILKKIILPRSASKIRFTQNNKHILVAD 362
+T G + YI +I + K++ ++S E +KKI L + I ++++K+ L
Sbjct: 343 LTSDGTKLYIVGFEQLINAEDKHIAIYSVETRECIKKISLQSKVTSICLSKDSKYALTNL 402
Query: 363 KSGDALLYNLEDEG--KSGXXXXXXXXXXXXXXQTIDEKYIITCDRDEKIRISCYPNTYN 536
+ L++LE+ + D+ ++++ D+KIRI + +
Sbjct: 403 EPHTTFLWDLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRI-WHRESGK 461
Query: 537 IETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
+ GH + V + P + S D TV++W
Sbjct: 462 LLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIW 498
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 471 KYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
+Y+ + +D+ I N + +GH + V I P++ YL+S S D +V LWD
Sbjct: 226 RYLASASKDKTAIIFDVVNLKRVFRL-IGHIDTVAYIRWSPDD-RYLLSCSCDKSVILWD 283
Query: 651 YVKGQ 665
G+
Sbjct: 284 AFTGE 288
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 35.1 bits (77), Expect = 0.011
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 468 EKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
+ +++T D I+ + ++ GH +V ++ I P + N S+ DGTVK+W
Sbjct: 110 QPFLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVW 169
Query: 648 DY 653
+
Sbjct: 170 SF 171
Score = 31.1 bits (67), Expect = 0.17
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D+ Y+IT D I++ Y T GH V + + + +IS S DGTVK+
Sbjct: 197 DKPYLITAGDDNLIKVWDY-QTKACVRILEGHTNNV-SFAFFHSKFPIIISGSEDGTVKI 254
Query: 645 W 647
W
Sbjct: 255 W 255
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 606 YLISTSGDGTVKLWDY 653
YLI+ D +K+WDY
Sbjct: 200 YLITAGDDNLIKVWDY 215
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 35.1 bits (77), Expect = 0.011
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRI-SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVK 641
D K++ TC D + I S ++ +E GH+ +V + ++ YL++ S D +
Sbjct: 226 DVKHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADS-TYLVTASSDHVAR 284
Query: 642 LWDYVKGQ 665
LW+ G+
Sbjct: 285 LWELSSGE 292
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3
Query: 69 CFSVNDNFIVAARNLLLDYYDYHTHKIITLSTSEETENDCIVDITVSGDQKYIA 230
C S + F+ AA N + YD +T + L T E N+ + I D K++A
Sbjct: 47 CISPDKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNN-VTAIAFHCDGKWLA 99
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 606 YLISTSGDGTVKLWD 650
+L ++S DGTVK+WD
Sbjct: 97 WLATSSEDGTVKVWD 111
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 35.1 bits (77), Expect = 0.011
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLCH 674
GH FV + + +++ Y +S S D T++LWD KG+ H
Sbjct: 61 GHSHFVSDCALSFDSH-YALSASWDKTIRLWDLEKGECTH 99
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 459 TIDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTV 638
+ D Y ++ D+ IR+ + +GH V ++ I P+N ++S S D T+
Sbjct: 72 SFDSHYALSASWDKTIRLWDLEKGECTHQF-VGHTSDVLSVSISPDN-RQVVSGSRDKTI 129
Query: 639 KLWDYV 656
K+W+ +
Sbjct: 130 KIWNII 135
Score = 29.5 bits (63), Expect = 0.53
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVK 659
GH +V ++ P N + L+S S D ++ LW+ V+
Sbjct: 13 GHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVR 47
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 35.1 bits (77), Expect = 0.011
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +3
Query: 459 TIDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTV 638
T+ + I T RDE+IR+ T N++ GH E V I + YLIS+S D T+
Sbjct: 273 TLADGNIATACRDEEIRV-WDTTTGNVKDIYSGHYESVTKILQWKS---YLISSSLDQTI 328
Query: 639 KLWD 650
++WD
Sbjct: 329 RVWD 332
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 33.5 bits (73), Expect = 0.033
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
H + N+E+ + LIS S DG VKLWD
Sbjct: 1177 HSSEIVNVEMQSSGMRELISASSDGEVKLWD 1207
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 33.5 bits (73), Expect = 0.033
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 543 TYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
+Y GH + V +IE+ P + +ST+ D T+KLW + C
Sbjct: 102 SYFSGHTDIVSSIEVSPIEDQF-VSTANDKTLKLWKMNQSSRC 143
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 32.7 bits (71), Expect = 0.057
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH +V+ +++ P N + + +GD T+K+WD G L
Sbjct: 161 GHLGWVRCVDVEPGN-QWFCTGAGDRTIKIWDLASGVL 197
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 32.3 bits (70), Expect = 0.075
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWDY 653
H V ++I + +Y+++ S DG +KLWDY
Sbjct: 133 HSRAVHKLDISSFHPSYVLTASQDGLIKLWDY 164
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 31.9 bits (69), Expect = 0.099
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 477 IITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYV 656
I T R IR+ C + + GH V ++ P N L S S DGT +LWD
Sbjct: 162 IATAYRSSSIRL-CDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIR 220
Query: 657 K 659
K
Sbjct: 221 K 221
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 30.7 bits (66), Expect = 0.23
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +3
Query: 474 YIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDY 653
+++T D +R+ +T ++ + H E V + P + Y +S S D ++LW
Sbjct: 268 FLLTSSADRTVRLWHPKSTKSLAVF--RHNEIVTCVAFHPIDDRYFVSGSLDCKIQLWSI 325
Query: 654 VKGQLCH 674
++ ++ H
Sbjct: 326 LRHKILH 332
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 30.7 bits (66), Expect = 0.23
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 477 IITCDRDEKIRISCYPNTYNIETYCL-GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
+ TC D+ I + N N + L GH++ V I P+ L STS D +WD
Sbjct: 297 LATCSTDKTIALWDLRNL-NQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWD 354
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 30.7 bits (66), Expect = 0.23
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 591 PNNYNYLISTSGDGTVKLWDYVKGQLCH 674
PN Y L ++S D TVK+WD K L H
Sbjct: 359 PNGYQ-LATSSADDTVKIWDLRKVSLAH 385
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKG 662
GH V + P+ +YL+S S D T +LWD G
Sbjct: 263 GHLARVGRVAFHPSG-DYLVSASFDTTWRLWDVHTG 297
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.23
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
GH+ + +++ LP+N N ++ D KLWD C
Sbjct: 145 GHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCC 183
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 30.3 bits (65), Expect = 0.30
Identities = 22/111 (19%), Positives = 51/111 (45%)
Frame = +3
Query: 321 IRFTQNNKHILVADKSGDALLYNLEDEGKSGXXXXXXXXXXXXXXQTIDEKYIITCDRDE 500
+R+T + + +L +G+ L+N T D +++I+ D
Sbjct: 87 VRWTPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCAEWST-DGRWLISGDGGG 145
Query: 501 KIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDY 653
++ PN N++ H+ V+++ PN+ + ++ S DG++K+W++
Sbjct: 146 MVKYF-EPNLNNVKIV-QAHEMEVRDVAFSPNDSKF-VTASDDGSLKVWNF 193
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 29.9 bits (64), Expect = 0.40
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQ 665
GH FV + + N LIS S D T+++WD G+
Sbjct: 587 GHDAFVTLLNVFQNR---LISGSADSTIRIWDLNTGK 620
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 9/41 (21%)
Frame = +3
Query: 573 KNIEILPNNYNYLIS---------TSGDGTVKLWDYVKGQL 668
K + +LP+N Y+ S + DG+VKLWD G+L
Sbjct: 620 KPLMVLPSNSGYISSFVSDEHKIISGNDGSVKLWDVRTGKL 660
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +3
Query: 459 TIDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTV 638
T+D + ++T D I++ +++T G + + ++ N L TS DG
Sbjct: 113 TVDRRIVVTGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLC 172
Query: 639 KLWDY 653
K WD+
Sbjct: 173 KFWDF 177
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 29.9 bits (64), Expect = 0.40
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GHK V + P N S S D T ++WD
Sbjct: 353 GHKNLVSGLSASPENPYMFASVSHDNTCRVWD 384
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 549 CLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQ 665
C GH V +I + ++ + S D T+K WD + GQ
Sbjct: 265 CEGHTGPVMDI-VFSDDPSVAYSVGQDHTIKTWDLITGQ 302
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 29.9 bits (64), Expect = 0.40
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 561 KEFVKNIEI---LPNNYNYLISTSGDGTVKLW 647
K ++ N EI P NY++S S DG VK W
Sbjct: 42 KSYMHNAEIYKCFPTKSNYILSVSYDGYVKFW 73
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.9 bits (64), Expect = 0.40
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 552 LGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
L H++ V + + LPN YL++ D ++ WD GQL
Sbjct: 323 LPHEQAVIDCKFLPNT-PYLLTACADCVIRKWDVRSGQL 360
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKG-QLC 671
HK+ V ++ I P + N S GD +WD G Q+C
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQIC 98
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.5 bits (58), Expect(2) = 0.50
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GH V +++L L S S D T+K+WD
Sbjct: 133 GHAGVVNALDVLKVGSELLTSVSDDCTMKVWD 164
Score = 20.6 bits (41), Expect(2) = 0.50
Identities = 6/16 (37%), Positives = 8/16 (50%)
Frame = +3
Query: 627 DGTVKLWDYVKGQLCH 674
DG +K+WD H
Sbjct: 198 DGAIKIWDLRNNHCSH 213
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 525 NTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
NT+ Y + E +KN+ N Y++S S DG +WD + +
Sbjct: 658 NTHVKSYYGHCNVESIKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASI 705
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 555 GHKEFVKNIEILP-NNYNYLISTSGDGTVKLWD 650
GH + + + + +P +N ++S SGD +KL+D
Sbjct: 87 GHVQNIFSAKFVPYSNNRQILSASGDKLIKLFD 119
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.5 bits (63), Expect = 0.53
Identities = 16/65 (24%), Positives = 34/65 (52%)
Frame = +3
Query: 471 KYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
K+I++ D IRI ++ + GH++ ++ + N ++S DGTV++W+
Sbjct: 400 KFIVSGSSDLTIRIF-EASSGKLLRMLQGHEDLIRTVRF---NDEKIVSGGYDGTVRIWN 455
Query: 651 YVKGQ 665
+ G+
Sbjct: 456 FNTGE 460
Score = 27.5 bits (58), Expect = 2.1
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 477 IITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
+++ D I I + N ++ Y GH + V + + + NY+IS+S D T ++W
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLKVY-FGHTDNVLGVVV---SENYIISSSRDHTARVW 328
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 29.5 bits (63), Expect = 0.53
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 552 LGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
L H V++++ P+ N S S DGT ++WD
Sbjct: 288 LSHTAAVEDLQWSPSEKNVFSSCSCDGTFRIWD 320
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 29.1 bits (62), Expect = 0.70
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 477 IITCDRDEKIRI-SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDY 653
+++ D +I+I Y + + T+ GH ++++ + ++L STS D T+KLWD
Sbjct: 282 LLSGSMDNQIKIWEVYHDRSLLRTF-QGHARPIRDLSFSQDGRSFL-STSFDKTIKLWDT 339
Query: 654 VKGQ 665
G+
Sbjct: 340 ELGK 343
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 513 SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
+CY +I T+ GH + + + P + + L+S S D +K+W+
Sbjct: 251 TCYIPKKHIFTW-KGHTKGISCLRFFPISGHLLLSGSMDNQIKIWE 295
>SPAC227.07c |pab1||protein phosphatase regulatory subunit
Pab1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 29.1 bits (62), Expect = 0.70
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 564 EFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
E + + E P N N+L+ +S G +KL D + LC
Sbjct: 226 EVITSAEFHPINCNHLMYSSSKGNIKLLDLRQSALC 261
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 29.1 bits (62), Expect = 0.70
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D KY+++C D R+ + Y GH V ++ P + Y + S D T +L
Sbjct: 390 DNKYLLSCSEDASARLWSVDTKTALVAY-KGHTGPVWDVAFGPFGH-YFATASHDQTAQL 447
Query: 645 W 647
W
Sbjct: 448 W 448
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 28.7 bits (61), Expect = 0.92
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 477 IITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYV 656
+ T D+ + + N Y GH++ V +E P++ L S+S D V +WD
Sbjct: 297 LATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLE 356
Query: 657 K 659
K
Sbjct: 357 K 357
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 28.7 bits (61), Expect = 0.92
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 543 TYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
T +GH + V++I ++ ++ +++ S D T+KLW ++ Q C
Sbjct: 210 TDLVGHTDNVRDI-LISDDGRTILTASSDATIKLWS-LRAQKC 250
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 28.7 bits (61), Expect = 0.92
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GH + + + P+ + L++ SGD T +LWD
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWD 163
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 28.7 bits (61), Expect = 0.92
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
H VK ++ N Y +++T+ D + +WD K +L
Sbjct: 374 HSSPVKTLQFGENGYWLVVTTNDDSDIFIWDLRKSEL 410
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 28.7 bits (61), Expect = 0.92
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D + IIT D KI++ + + I T+ H V + N L S+S DG+V+
Sbjct: 350 DGQRIITGADDGKIKVWDMNSGFCIVTFTQ-HTSAVSGL-CFSKRGNVLFSSSLDGSVRA 407
Query: 645 WDYVK 659
WD ++
Sbjct: 408 WDLIR 412
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +3
Query: 555 GHKEFVKNI---EILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH++ V + E+ NN L+S S DGTV+ W Y QL
Sbjct: 389 GHEDCVWELFCHEVKDNN-PILLSLSSDGTVRGWKYTGEQL 428
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 528 TYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQ 665
+Y + GHK+ V+ + + N + S S DGT +W+ + G+
Sbjct: 3 SYELSRELGGHKQDVRGVCSISNEL--IGSASRDGTYSVWEQINGE 46
Score = 26.6 bits (56), Expect = 3.7
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 462 IDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVK 641
+ E IT D+ I+I N + L H + V+++ +P + S S DG +K
Sbjct: 146 LGEDIFITGSADKLIKIW---NGEKLVKSILAHNDCVRSLCQIPGGF---ASCSNDGVIK 199
Query: 642 LW 647
LW
Sbjct: 200 LW 201
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +3
Query: 462 IDEKYIITCDRDEKIRISCYPNTYNIETYCL-GHKEFVKNI-EILPNNYNYLISTSG-DG 632
+ K I T D +R+ + + TY GH+ K+I ++ ++ N +I T G DG
Sbjct: 246 LPNKEIATVSEDLTLRLWTWNDKTLTNTYTYTGHRG--KHIWSLVVSSANPIIYTGGNDG 303
Query: 633 TVKLWDY 653
+V+ WDY
Sbjct: 304 SVRSWDY 310
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 213 DQKYIAVIT--SISKNLVVFSSCLEILKKIILPRSASKIRFTQNNKH 347
D+ I VIT S S+NL++ +CL +L+K+ + K ++N H
Sbjct: 619 DRVSIPVITRASSSRNLLITMNCLRVLEKVCKYSNIRKEIIARSNLH 665
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 549 CLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
C H +FV +I P + + +S S D ++LW
Sbjct: 345 CFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLW 377
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D+ +I+ D+ IRI Y T + GH + ++ L + L+S S D TVKL
Sbjct: 322 DQCKLISGSMDKTIRIWNY-RTSECISILHGHTD---SVLCLTFDSTLLVSGSADCTVKL 377
Query: 645 WDYVKGQ 665
W + G+
Sbjct: 378 WHFSGGK 384
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 609 LISTSGDGTVKLWDYVKGQLCH 674
L S S DGT+K WD K + H
Sbjct: 447 LFSCSLDGTIKQWDIEKKKCVH 468
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/66 (19%), Positives = 32/66 (48%)
Frame = +3
Query: 468 EKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
+ +++ C + +I + + + T + + I + P+ ++ GDG ++LW
Sbjct: 89 KNHLLACHDNGQISMWSKGSWLLVHTLKSSSHKGITGIAVHPSE-KLALTVGGDGKLRLW 147
Query: 648 DYVKGQ 665
D V+G+
Sbjct: 148 DLVRGK 153
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
HK+ VK++ + + YLI+ S DG+V +WD
Sbjct: 238 HKKRVKSVYPVDD---YLITASSDGSVCIWD 265
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +3
Query: 606 YLISTSGDGTVKLWDYVK 659
YL STS D T+K++D+ +
Sbjct: 47 YLASTSSDETIKIFDHTR 64
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 504 FFHLCRM*LYIFHQ*FAIYPKECLNAPAILYQI 406
FFH C M +++ + + P + N P +L+QI
Sbjct: 1117 FFHTCLMGVFLGTTTYLLSPVDFANNPLLLFQI 1149
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GH+++V+ + + L+S DGT++LWD
Sbjct: 164 GHEDYVRTASWM--SATRLVSGGYDGTIRLWD 193
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 480 ITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVK 659
+ CD D IRI T I GH + + + +L++ S DGT++ WD
Sbjct: 547 VACD-DFGIRIVDV-QTRKIVRELWGHSNRLTSFDFSDTG-RWLVTASLDGTIRTWDLPT 603
Query: 660 GQL 668
G L
Sbjct: 604 GHL 606
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 552 LGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQ 665
+GHK V+ + + + N+L S DG +++W+ + G+
Sbjct: 376 IGHKGRVRCLSVHVSG-NWLASGGDDGVLRIWEVMTGR 412
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSG--DGTVKLWDYVKGQLCH 674
H VK I P+ L S G D T+KLW+ +G + H
Sbjct: 415 HIAAVKAITWSPHQRGILASGGGTADRTIKLWNTQRGSMLH 455
>SPAC12B10.03 |||WD repeat protein, human WDR20
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 597 NYNYLISTSGDGTVKLWDYVK 659
+Y YL S GT+KL+D+VK
Sbjct: 333 DYQYLALVSERGTLKLFDFVK 353
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 513 SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLCH 674
S N + I T GH + V+ + L + ++S S DGT+++W G H
Sbjct: 562 SATTNPFYIRTL-RGHTDSVREVACLGD---LIVSASYDGTLRVWKASTGVCLH 611
>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 720 LLLNFHHQLYHLYQLCGIIVL*HSPTVLQFHHLKYL-SNNY 601
+++ + HL+ +CGI+ P L F ++YL S NY
Sbjct: 167 IIIQVAEAVKHLHDVCGIVHRDIKPENLLFQPIEYLPSQNY 207
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 30 SNKVHRSYNKIMTCFSVNDNFIVAARNLLLDYYDY 134
SN+ +S + + F+ N N IVA RN LLD + Y
Sbjct: 506 SNEKEKSPIQQLLTFN-NSNMIVAKRNQLLDIFIY 539
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQ 665
GH++ ++ P + +L+S+ DG +W+ G+
Sbjct: 258 GHQKAALSLSWCPEDPTFLLSSGKDGRAMVWNVETGE 294
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GH++ V ++ S SGDG VKLWD
Sbjct: 62 GHQDGVYSLARDTKTLIDCASGSGDGAVKLWD 93
>SPCC70.04c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 6.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 633 FHHLKYLSNNYNY 595
FHHL +L+ NY+Y
Sbjct: 148 FHHLMFLTTNYSY 160
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GHK V ++ +P + + L + D V LWD
Sbjct: 313 GHKGDVNAVKWMPGSKSKLATCGDDCVVSLWD 344
>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 510 ISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTS 623
+ Y NT+N+ Y L ++ K + L N+ N++ +TS
Sbjct: 149 LKVYANTFNVTNYILDFEQADKLLSDLKNS-NHVFATS 185
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
H E++ +++ + + L + S D TVK+WD
Sbjct: 331 HSEYITSLDF-SHPFGTLATASTDKTVKVWD 360
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 267 SSCLEILKKIILPRSASKIRFTQNNKHILVADKSGDALLYNLEDEGKS 410
S +ILKKI++P A ++R + H + YN +DE S
Sbjct: 745 SKARDILKKILVPDPAKRVRMSAIMNHAYLRSHVSLFETYN-DDEATS 791
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,775,562
Number of Sequences: 5004
Number of extensions: 58497
Number of successful extensions: 298
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 294
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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