Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1h08f
(745 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 42 5e-04
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 38 0.006
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 36 0.023
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 36 0.030
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 36 0.030
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 36 0.040
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 35 0.070
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.093
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 34 0.093
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 34 0.093
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 33 0.21
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 33 0.21
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 32 0.37
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 32 0.37
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 32 0.37
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 32 0.37
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 32 0.37
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 32 0.49
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 32 0.49
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 31 0.65
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 31 0.65
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 31 0.86
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 31 0.86
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 31 0.86
Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 30 1.5
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 30 1.5
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 30 1.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 30 2.0
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 29 2.6
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 29 3.5
U28412-9|AAK71403.2| 251|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81146-4|CAB03525.1| 501|Caenorhabditis elegans Hypothetical pr... 29 4.6
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 28 6.1
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 28 8.0
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 28 8.0
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 28 8.0
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 28 8.0
>U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical
protein Y102E9.2 protein.
Length = 388
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/121 (27%), Positives = 62/121 (51%)
Frame = +3
Query: 297 ILPRSASKIRFTQNNKHILVADKSGDALLYNLEDEGKSGXXXXXXXXXXXXXXQTIDEKY 476
++P++ + I F + + +++V D++GD +++ + S + D K
Sbjct: 112 VVPKAPTAIVFDKEDAYVVVGDRAGDVHRFSVLNG--SAIEMAGAISMILDVAFSPDGKR 169
Query: 477 IITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYV 656
++ DRDEK+R YP T I+++ LGH E+VK + + N + L S+ GD + W
Sbjct: 170 LLMADRDEKVRALRYPATSVIDSFFLGHTEYVKTLAVQDN--DSLWSSGGDKNLYNWSIA 227
Query: 657 K 659
K
Sbjct: 228 K 228
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 471 KYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
K +++C D I++ + TY+ GH+ V ++ LP ++++S S D T+K WD
Sbjct: 161 KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG-DFVLSASRDHTIKQWD 219
Query: 651 YVKG 662
G
Sbjct: 220 ISTG 223
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 525 NTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
NT ++ L H+ +V+ + P YLIS + D T+++W+ + Q C
Sbjct: 320 NTGDVLFTLLAHENWVRGLAFHPKG-KYLISVADDKTLRVWE-LSAQRC 366
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH+ + + P + + S S D T+K+WDY GQL
Sbjct: 104 GHRLPITRVIFHPL-WTIMASCSEDATIKVWDYETGQL 140
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 471 KYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
K +++C D I++ + TY+ GH+ V ++ LP ++++S S D T+K WD
Sbjct: 161 KQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTG-DFVLSASRDHTIKQWD 219
Query: 651 YVKG 662
G
Sbjct: 220 ISTG 223
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 525 NTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
NT ++ L H+ +V+ + P YLIS + D T+++W+ + Q C
Sbjct: 320 NTGDVLFTLLAHENWVRGLAFHPKG-KYLISVADDKTLRVWE-LSAQRC 366
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH+ + + P + + S S D T+K+WDY GQL
Sbjct: 104 GHRLPITRVIFHPL-WTIMASCSEDATIKVWDYETGQL 140
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 474 YIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
Y+I+ D KIR+ + N + +E H ++ I + P + +S S D T+K+W
Sbjct: 205 YLISASDDRKIRVWDWENEWRMEQEFQEHAHYIMQIAVNPEDPEMFVSGSLDKTLKVW 262
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 468 EKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
+ +I T D++IRI T+++ H +F++++ + P YLIS S D +++W
Sbjct: 161 KNWIATASDDQQIRIFD-AETFSLINEFTAHSDFIRSLTVHPT-LPYLISASDDRKIRVW 218
Query: 648 DY 653
D+
Sbjct: 219 DW 220
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 474 YIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDY 653
Y+I+ D +++ + N + ++ GH +V I I P + N + S D TVK+W +
Sbjct: 113 YVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQF 172
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCL-GHKEFVKNIEILPNNYN-YLISTSGDGTV 638
D T D+ +++ + + N+ + L GH++ V ++ Y+IS + D V
Sbjct: 154 DNNTFATASLDKTVKVWQFGS--NVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLV 211
Query: 639 KLWDY 653
K+WDY
Sbjct: 212 KIWDY 216
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 477 IITCDRDEKIRI--SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
++TC +D I + P I +GH+ V ++ + Y++S SGD T+K+W
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF---DDRYIVSASGDRTIKVW 370
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 35.9 bits (79), Expect = 0.030
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 477 IITCDRDEKIRI--SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
++TC +D I + P I +GH+ V ++ + Y++S SGD T+K+W
Sbjct: 315 MVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF---DDRYIVSASGDRTIKVW 370
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 35.5 bits (78), Expect = 0.040
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +3
Query: 459 TIDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTV 638
T D++Y+IT D ++ T + H V ++++ NN +LI+ SGD V
Sbjct: 962 TSDDQYLITASADSSAKMIKL-ETGEVMRSFNDHTGSVVSLQLTSNN-QFLITGSGDFVV 1019
Query: 639 KLWDYVKGQ 665
++WD G+
Sbjct: 1020 QMWDVTNGK 1028
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GHK+ V+++ P L S S DG++KLWD
Sbjct: 273 GHKKSVEDLAWSPTETGLLASCSADGSIKLWD 304
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 34.3 bits (75), Expect = 0.093
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNY-LISTSGDGTVK 641
++K ++T +D R+ + GH++ V ++ N +Y ++S+S D TVK
Sbjct: 333 NQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQDSVTSVSF---NTDYRIVSSSDDATVK 389
Query: 642 LWD 650
+WD
Sbjct: 390 IWD 392
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 34.3 bits (75), Expect = 0.093
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNY-LISTSGDGTVK 641
++K ++T +D R+ + GH++ V ++ N +Y ++S+S D TVK
Sbjct: 331 NQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQDSVTSVSF---NTDYRIVSSSDDATVK 387
Query: 642 LWD 650
+WD
Sbjct: 388 IWD 390
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 34.3 bits (75), Expect = 0.093
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 480 ITCDRDEKIRI-SCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYV 656
++C D KI++ Y + TY GHK V+ + N +S S D VKLWD
Sbjct: 292 LSCSMDTKIKLWEVYDRQRVVRTYA-GHKLPVREVAF-NNEGTEFLSASFDRYVKLWDTE 349
Query: 657 KGQL 668
GQ+
Sbjct: 350 TGQV 353
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 492 RDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
R++ + C+ + TY GH + V ++ P + + +S S D +KLW+
Sbjct: 253 REDYVPERCFVPKKLVHTY-RGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWE 304
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +3
Query: 516 CYPNTYNIET-YCL----GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
CY +++ T C+ GH + + ++E +PN Y +I+ S D ++K+WD
Sbjct: 360 CYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYE-MITGSSDNSMKVWD 408
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 477 IITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYV 656
+++C+ D +R+ + GH+ + +++ N + ++S DGTVKLWD
Sbjct: 474 LVSCNADSHVRVWDIHEGTCVHMLS-GHRSAITSLQWFGRNM--VATSSDDGTVKLWDIE 530
Query: 657 KGQL 668
+G L
Sbjct: 531 RGAL 534
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 462 IDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVK 641
I + ++T D +++ C + T +GH V +I Y++S S D TVK
Sbjct: 262 IHDDVLVTGSDDNTLKVWCIDKGEVMYTL-VGHTGGVWTSQISQCG-RYIVSGSTDRTVK 319
Query: 642 LWDYVKGQLCH 674
+W V G L H
Sbjct: 320 VWSTVDGSLLH 330
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 477 IITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYV 656
+++C+ D +R+ + GH+ + +++ N + ++S DGTVKLWD
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLS-GHRSAITSLQWFGRNM--VATSSDDGTVKLWDIE 532
Query: 657 KGQL 668
+G L
Sbjct: 533 RGAL 536
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 462 IDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVK 641
I + ++T D +++ C + T +GH V +I Y++S S D TVK
Sbjct: 264 IHDDVLVTGSDDNTLKVWCIDKGEVMYTL-VGHTGGVWTSQISQCG-RYIVSGSTDRTVK 321
Query: 642 LWDYVKGQLCH 674
+W V G L H
Sbjct: 322 VWSTVDGSLLH 332
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVK 659
GH V++I N Y YL + S DG VKLWD K
Sbjct: 378 GHTAAVRSIAFSENGY-YLATGSEDGEVKLWDLRK 411
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 477 IITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYV 656
+++C+ D +R+ + GH+ + +++ N + ++S DGTVKLWD
Sbjct: 476 LVSCNADSHVRVWDIHEGTCVHMLS-GHRSAITSLQWFGRNM--VATSSDDGTVKLWDIE 532
Query: 657 KGQL 668
+G L
Sbjct: 533 RGAL 536
Score = 32.3 bits (70), Expect = 0.37
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +3
Query: 462 IDEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVK 641
I + ++T D +++ C + T +GH V +I Y++S S D TVK
Sbjct: 264 IHDDVLVTGSDDNTLKVWCIDKGEVMYTL-VGHTGGVWTSQISQCG-RYIVSGSTDRTVK 321
Query: 642 LWDYVKGQLCH 674
+W V G L H
Sbjct: 322 VWSTVDGSLLH 332
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 603 NYLISTSGDGTVKLWDYVKGQL 668
NYL+S S DG +++W+Y+ G+L
Sbjct: 227 NYLVSGSKDGFIEVWNYMNGKL 248
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/67 (20%), Positives = 33/67 (49%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D +I++ D +R+ + ++ GH ++ ++ N++IS S DG++++
Sbjct: 318 DNSHILSGGNDHVVRVHGMKSGKCLKEM-RGHSSYITDVRYSDEG-NHIISCSTDGSIRV 375
Query: 645 WDYVKGQ 665
W G+
Sbjct: 376 WHGKSGE 382
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH +V+ +++ P N + S D +K+WD GQL
Sbjct: 182 GHTGWVRAVDVEPGN-QWFASGGADRIIKIWDLASGQL 218
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH +V+ +++ P N + S D +K+WD GQL
Sbjct: 182 GHTGWVRAVDVEPGN-QWFASGGADRIIKIWDLASGQL 218
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D I + D +RI N I+T V ++ PN Y+++++ D T+KL
Sbjct: 224 DGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNG-KYILASNLDSTLKL 282
Query: 645 WDYVKGQ 665
WD+ KG+
Sbjct: 283 WDFSKGK 289
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/22 (50%), Positives = 18/22 (81%)
Frame = +3
Query: 603 NYLISTSGDGTVKLWDYVKGQL 668
NYL+S S DG +++W+Y+ G+L
Sbjct: 227 NYLVSGSKDGFIEVWNYMNGKL 248
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/67 (20%), Positives = 33/67 (49%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
D +I++ D +R+ + ++ GH ++ ++ N++IS S DG++++
Sbjct: 318 DNSHILSGGNDHVVRVHGMKSGKCLKEM-RGHSSYITDVRYSDEG-NHIISCSTDGSIRV 375
Query: 645 WDYVKGQ 665
W G+
Sbjct: 376 WHGKSGE 382
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GH V +E P N N IS S DG+++LW+
Sbjct: 222 GHTATVNCVEFNPLNKNEFISCSDDGSLRLWN 253
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 549 CLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
C H +FV + LP + Y +S S DG +++W
Sbjct: 753 CFQHIDFVTCVAFLPKDDRYFLSGSLDGKLRMW 785
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +3
Query: 465 DEKYIITCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKL 644
+E+++++ D+ ++ PN N + E ++ + P + + + S DGT ++
Sbjct: 186 NEQWLLSADQGGYVKY-WQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFA-TASDDGTARV 243
Query: 645 WDYVK 659
WD+ +
Sbjct: 244 WDFAR 248
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 31.9 bits (69), Expect = 0.49
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 549 CLGHKEFVKNIEILPNNYNYLISTSGDGTVKLW 647
C H +FV + LP + Y +S S DG +++W
Sbjct: 753 CFQHIDFVTCVAFLPKDDRYFLSGSLDGKLRMW 785
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 552 LGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVK 659
+ H E V ++ I PN YL+S S DG++++W+ K
Sbjct: 597 IAHVEGVSSLAIDPNGL-YLLSGSHDGSIRMWNMEK 631
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 552 LGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVK 659
+ H E V ++ I PN YL+S S DG++++W+ K
Sbjct: 597 IAHVEGVSSLAIDPNGL-YLLSGSHDGSIRMWNMEK 631
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH+E ++ + + N N +S S D TVKLW +K +L
Sbjct: 1106 GHQEKIRKLAAISNE-NSFVSASSDKTVKLWS-IKPEL 1141
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 31.1 bits (67), Expect = 0.86
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQL 668
GH+E ++ + + N N +S S D TVKLW +K +L
Sbjct: 1106 GHQEKIRKLAAISNE-NSFVSASSDKTVKLWS-IKPEL 1141
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 561 KEFVKNIEI-LPNNYNYLISTSGDGTVKLWDYVK 659
K+ + EI +PN N +++ S GT+ +WDY +
Sbjct: 491 KKIISKREINIPNFQNTIVTASTSGTISVWDYTE 524
>Z81146-5|CAB03522.3| 699|Caenorhabditis elegans Hypothetical
protein K10D11.3 protein.
Length = 699
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 30 SNKVHRSYNKIMTCFSVNDNFIVAARNLLLDYYD 131
SNK S +K MT F+ +N+IV + ++ DYY+
Sbjct: 420 SNKPMVSNSKQMTVFTFQENYIVGSNFVVQDYYN 453
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
GH ++ L +N ++++SGD T LWD GQ C
Sbjct: 141 GHTGYLSCCRFLDDNQ--IVTSSGDMTCALWDIETGQQC 177
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
GH ++ L +N ++++SGD T LWD GQ C
Sbjct: 141 GHTGYLSCCRFLDDNQ--IVTSSGDMTCALWDIETGQQC 177
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
GH ++ L +N ++++SGD T LWD GQ C
Sbjct: 141 GHTGYLSCCRFLDDNQ--IVTSSGDMTCALWDIETGQQC 177
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVK 659
GH++ V +++ + YL+S S D T+K+WD K
Sbjct: 316 GHRDGVTHVDSRQDE-RYLLSNSKDQTIKVWDLRK 349
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVK 659
GH++ V +++ + YL+S S D T+K+WD K
Sbjct: 357 GHRDGVTHVDSRQDE-RYLLSNSKDQTIKVWDLRK 390
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 519 YPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQ 665
+P T + Y GH V+ I + P L S DGTV++W G+
Sbjct: 332 FPTT--LAFYMRGHTGQVRAITVEPERGELLASGGEDGTVRIWMIATGR 378
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Frame = +3
Query: 57 KIMTCFSVNDNFIVAARNLLLDYYDYHTHKIITLSTSEETENDCIVDITVSGDQKYIAVI 236
+ ++C + +VA + + Y+ T + + ++ + + D+ S + +
Sbjct: 218 RALSCHPGGEFLLVATDHPTVRLYNIETAQAYASANPDDQHTESVTDVHYSENARLYVTA 277
Query: 237 TSISKNLV---VFSSCLEILKKIILPRSASKIRFTQNNKHILVADKSGDALLYNL 392
+ + V + C+E K+ S +FT+N K+IL + L+ L
Sbjct: 278 SKDGHVKIWDGVSNRCVETFKRAHDGSSICSAKFTKNGKYILTSGMDSIVKLWEL 332
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQ 665
GH+ + +I+I + N+++S S D T+K+W V Q
Sbjct: 486 GHESAISSIDI---HGNHIVSGSWDRTIKMWTIVDSQ 519
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKGQLC 671
GHKE V ++ + + ++ISTS D +K W + Q C
Sbjct: 143 GHKESVTQMKFVRGD-RFIISTSKDSLIKFWS-IASQSC 179
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 555 GHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
GH+ V +++ N++ L S SGD T+K+W+
Sbjct: 521 GHRRGVGDVKFAKNSHK-LASCSGDMTIKIWN 551
>U28412-9|AAK71403.2| 251|Caenorhabditis elegans Hypothetical
protein T19C3.7 protein.
Length = 251
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 489 DRDEKIRISCYPNTYNIETYCLGH---KEFVKNIEILPNNYNYL-ISTSGDGTVKLWDYV 656
+RD K++IS P N+E C+ + E +K +I Y I+ S +G + + +
Sbjct: 38 ERDPKVKISVNPEEENVERPCVLYSKSNEIIKKPDIFEEIYKRTPITLSNNGRIDVAELP 97
Query: 657 KGQ 665
GQ
Sbjct: 98 AGQ 100
>Z81146-4|CAB03525.1| 501|Caenorhabditis elegans Hypothetical
protein K10D11.6 protein.
Length = 501
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 30 SNKVHRSYNKIMTCFSVNDNFIVAARNLLLDYYD 131
SNK S ++ MT F+ +N++V + ++ DYY+
Sbjct: 218 SNKPMVSKSRQMTIFTFQENYLVGSNFVVQDYYN 251
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 483 TCDRDEKIRISCYPNTYNIETYCLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
+C +D+K + N I +Y GH V +I++ + ++ SGD TVK+WD
Sbjct: 27 SCAKDKKPCVWYTENGERIGSYD-GHNGAVWDIDVSWDTTK-CVTASGDLTVKIWD 80
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
H + ++ +P + ++S SGD T++ WD
Sbjct: 92 HDGAIMDVVGVPQKESQIVSISGDSTIRCWD 122
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKG 662
H +FV ++ P+ + ST GDGT+ L++ V G
Sbjct: 189 HTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDG 222
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKG 662
H +FV ++ P+ + ST GDGT+ L++ V G
Sbjct: 189 HTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDG 222
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 558 HKEFVKNIEILPNNYNYLISTSGDGTVKLWDYVKG 662
H +FV ++ P+ + ST GDGT+ L++ V G
Sbjct: 189 HTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDG 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,928,555
Number of Sequences: 27780
Number of extensions: 310834
Number of successful extensions: 931
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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