Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1h08f
(745 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 25 0.75
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 24 1.7
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.2
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +3
Query: 549 CLGHKEFVKNIEILPNNYNYLISTSGDGTVKLWD 650
C G++++++ +E+ N + +SGD WD
Sbjct: 168 CTGYQQYLRLLEVPQINLEWGEGSSGDDLSSEWD 201
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.8 bits (49), Expect = 1.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 186 NHSRSLPMLIMLLFYVYDNHNNLEVNFLRQ 97
NHS+ + IM Y +N+ NLE L Q
Sbjct: 231 NHSKEYLVSIMFSHYDRNNNGNLEREELEQ 260
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 732 VLXILLLNFHHQ 697
VL +L+LNFHH+
Sbjct: 341 VLTVLVLNFHHR 352
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -2
Query: 732 VLXILLLNFHHQ 697
VL +L+LNFHH+
Sbjct: 341 VLTVLVLNFHHR 352
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYIEQ 110
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYIEQ 110
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYIEQ 110
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 85 LSNNYNYNNYNNNYKPLYYNINYIEQ 110
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNINYIEQ 343
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNINYIEQ 343
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 318 LSNNYNYNNYNNNYKPLYYNINYIEQ 343
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 615 LSNNYNY*VRFQYFLQILYGLNSMFQ 538
LSNNYNY + + Y +N + Q
Sbjct: 307 LSNNYNYNNYNNNYKPLYYNINYIEQ 332
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 9.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2
Query: 171 LPMLIMLLFY 142
+PML+ML FY
Sbjct: 258 IPMLVMLFFY 267
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,195
Number of Sequences: 438
Number of extensions: 4119
Number of successful extensions: 26
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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