Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1h06r
         (875 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   2.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   2.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   2.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   3.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   6.5  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   6.5  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   8.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   8.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.5  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 520 YGRYYHWYSGDIVN 479
           Y  YY W+ G IVN
Sbjct: 142 YNNYYIWHPGKIVN 155


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 261  HRPQNRAVNGMTNSIAASIEPRRTSEAGPHHAEALSSRP 377
            H PQ       TNS+   + P  T  A P H   +  +P
Sbjct: 1368 HSPQITLTATTTNSLTMKVRPHPTDNA-PIHGYTIHYKP 1405


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 520 YGRYYHWYSGDIVN 479
           Y  YY W+ G IVN
Sbjct: 142 YNNYYIWHPGKIVN 155


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = +2

Query: 77  RSSLTENTRIRQLSNENEDKQITHQVICISTVRLTDRRSLTLGLCSVRSPIDLDLR 244
           RSS + N    Q  N+N +   +HQ +  + +R T   ++++ L S+ SP +  L+
Sbjct: 103 RSSTSSNDPKNQYKNQNNNHYTSHQHL-RTHLRGTLTVNVSVLLLSLASPDESSLK 157


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +3

Query: 270 QNRAVNGMTNSIAASIEPRRTSEAGPHHAEALS 368
           QNR  NG+ N     +E  R  E      E LS
Sbjct: 834 QNRTFNGLNNLQILHLEDNRIRELKGFEFERLS 866


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 71  LLRSSLTENTRIRQLSNENEDKQITHQVICISTVRLTD 184
           L+   + E T     SNE+ED+     V+ IS  + T+
Sbjct: 419 LVAPGMEEPTNTASGSNEDEDETPLDPVVVISNDKSTE 456


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 288 HSLPDFVDDEPSQ 250
           H+ P  +DDEP++
Sbjct: 269 HAKPSLIDDEPTE 281


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 288 HSLPDFVDDEPSQ 250
           H+ P  +DDEP++
Sbjct: 269 HAKPSLIDDEPTE 281


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -1

Query: 692 IFCSLTSSSRKNLRKFTIELP*FATRHRT 606
           +FC+L +   K LR    ++    TRH T
Sbjct: 202 MFCNLENVKLKELRIILEDIKHINTRHNT 230


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 288 HSLPDFVDDEPSQ 250
           H+ P  +DDEP++
Sbjct: 269 HAKPSLIDDEPTE 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,479
Number of Sequences: 438
Number of extensions: 5416
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)