Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1h01r
(950 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c... 305 5e-84
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 31 0.24
SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr 1|||M... 29 1.3
SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51... 27 2.9
SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase |Schizo... 27 2.9
SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr 1|||... 27 3.9
SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr 2|... 27 3.9
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 27 5.1
SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.8
SPCC645.11c |mug117||meiotically upregulated gene Mug117|Schizos... 26 6.8
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 26 9.0
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 26 9.0
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 26 9.0
>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 449
Score = 305 bits (749), Expect = 5e-84
Identities = 146/268 (54%), Positives = 197/268 (73%)
Frame = -3
Query: 864 SDAETLKLQNIDPRIKTMYEGVRDVLQKYRSGKLPKAFKMVPHLQNWEQILYLTEPTTWS 685
++ E L + P++ +Y V +L KYRSGK+PKAFK++P L NWE ILYLT P W+
Sbjct: 180 AEEEENALPPLPPKVIEVYSKVGVLLSKYRSGKIPKAFKIIPTLSNWEDILYLTRPDMWT 239
Query: 684 AAAMYQATRIFASNLKEKMAQRFYNLVLLPRVRDDLAEYKRLNFHLYQALRKALFKPGAF 505
A Y+ATRIF SNLK AQ F +++L RVRDD+ E K+LN+HLY AL+KAL+KP ++
Sbjct: 240 PHACYEATRIFISNLKPVQAQHFLTVIILERVRDDIRENKKLNYHLYMALKKALYKPSSW 299
Query: 504 MKGILLPLCEAGDCTLREAIIVGSVLARNSVPVLHSSAALLKIAEMDYNGANSIFLRILF 325
KG L PL + +CTLREA I+GS+L + SVPVLHS+AALL++ E D +GA S+F+RIL
Sbjct: 300 FKGFLFPLVQE-NCTLREAAIIGSILQKVSVPVLHSAAALLRLTEFDLSGATSVFIRILL 358
Query: 324 DKKYALPYRVVDAVVFHFLRFQSEARVLPVLWHQALLTFVQRYKADISTEQRDALLELLR 145
DKKYALPY+V+D++VF+F+R++S R L VL HQ++L F QRYK DI+ EQ+DALLE++R
Sbjct: 359 DKKYALPYKVLDSLVFYFMRWKSLERPLAVLEHQSMLVFAQRYKFDITPEQKDALLEVVR 418
Query: 144 KQYHPTITQEIRRELQQAQCRDXEVNEE 61
+ H +I EIRREL + R E+ E
Sbjct: 419 LKGHYSIGPEIRRELLNSASRGEEIPVE 446
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -3
Query: 885 TELQTQFSDAETLKLQNIDPRIKTMYEGVRDVLQKYRSGKLPKAFKMVPHLQ 730
T LQ Q E L + PR K + ++ +KYR K P A+ + P LQ
Sbjct: 148 THLQFQIPSNEKKSLDDPSPRRKPSFFSKSNLKRKYRYLKNPDAWNLPPSLQ 199
>SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 360
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = -3
Query: 546 YQALRKALFKPGAFM--KGILLPLCEAGDCTLREAIIVGSVLARNSVPVLHSSAALLKIA 373
YQ L L K + KG++L A T ++ +++ S+PV++S + +
Sbjct: 259 YQGLNPNLAKAAVDLGAKGLVLAGMGAASWTDPGNEVIDGLISNQSIPVVYSHRTMDGFS 318
Query: 372 EMDYNGANSIF 340
+ YNG S F
Sbjct: 319 DYYYNGIPSYF 329
>SPAC23A1.18c |mrp51||mitochondrial ribosomal protein subunit L51-b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 828 PRIKTMYEGVRDVLQKYRSGKLPKAFKMVPHLQNWEQILYLTEPT 694
P+IKT Y VR Y+ + K V ++NW ++ +P+
Sbjct: 44 PKIKTRYICVRQQDSLYKQADFQSSAKFVRLVRNWFDAGFVRDPS 88
>SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 360
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = -3
Query: 546 YQALRKALFKPGAFM--KGILLPLCEAGDCTLREAIIVGSVLARNSVPVLHSSAALLKIA 373
YQ L L K + KG++L A T ++ +++ S+PV++S + +
Sbjct: 259 YQGLNPNLAKAAVDLGAKGLVLAGMGAASWTDPGNEVIDGLISNQSIPVVYSHRTMDGFS 318
Query: 372 EMDYNGANSIF 340
+ YNG + F
Sbjct: 319 DYYYNGIPAYF 329
>SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 356
Score = 27.1 bits (57), Expect = 3.9
Identities = 27/93 (29%), Positives = 43/93 (46%)
Frame = -3
Query: 615 YNLVLLPRVRDDLAEYKRLNFHLYQALRKALFKPGAFMKGILLPLCEAGDCTLREAIIVG 436
YN+ LPRV D L Y+ LN L ++ GA KG++L A T ++
Sbjct: 242 YNIKQLPRV-DILYGYQGLN----PKLAESAVHLGA--KGLVLAAMGATSWTDDGNEVIS 294
Query: 435 SVLARNSVPVLHSSAALLKIAEMDYNGANSIFL 337
S++ +++PV++S + G S FL
Sbjct: 295 SLIREHNIPVVYSHRTAEGYSSNSCLGIPSYFL 327
>SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 27.1 bits (57), Expect = 3.9
Identities = 27/93 (29%), Positives = 43/93 (46%)
Frame = -3
Query: 615 YNLVLLPRVRDDLAEYKRLNFHLYQALRKALFKPGAFMKGILLPLCEAGDCTLREAIIVG 436
YN+ LPRV D L Y+ LN L ++ GA KG++L A T ++
Sbjct: 242 YNIKQLPRV-DILYGYQGLN----PKLAESAVHLGA--KGLVLAAMGATSWTDDGNEVIS 294
Query: 435 SVLARNSVPVLHSSAALLKIAEMDYNGANSIFL 337
S++ +++PV++S + G S FL
Sbjct: 295 SLIREHNIPVVYSHRTAEGYSSNSCLGIPSYFL 327
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 26.6 bits (56), Expect = 5.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 597 PRVRDDLAEYKRLNFHLYQALRKAL 523
P+ +D L++YK L+FH + + K +
Sbjct: 520 PKAKDQLSKYKVLDFHPFDPVSKKI 544
>SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 575
Score = 26.2 bits (55), Expect = 6.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 756 AFKMVPHLQNWEQILY 709
AF ++PHL WE+I++
Sbjct: 174 AFSLLPHLLKWEEIVW 189
>SPCC645.11c |mug117||meiotically upregulated gene
Mug117|Schizosaccharomyces pombe|chr 3|||Manual
Length = 186
Score = 26.2 bits (55), Expect = 6.8
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 368 ISAIFNKAALECKTGTELRASTDPTIIASLSVQSPASHNGSKI-PFIKAPGLNKAFLNAW 544
+S +F A + + R S + SV P + GS + P ++ G N+A NA+
Sbjct: 34 LSTVFEPEAKGSRITSNYRRSLFNMLGYDNSVH-PNNCKGSFLCPMLR--GENRACPNAY 90
Query: 545 YKWKFNLLYSARSSLTRGSKTKL 613
K+ +L+Y SS T S T +
Sbjct: 91 MKYNRSLIYHGYSSYTASSCTAI 113
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = +2
Query: 704 VKYKICSQFCKCGTILKAFGNLPDLYFWSTSLTPSYMVFILGSIFC 841
V + + C FG D+Y +L +Y VF +G C
Sbjct: 126 VSWTATAYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGCFLC 171
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 213 TFVQRYKADISTEQRDALLELLRKQYHPTIT 121
TF YKA I + D L LLRK P ++
Sbjct: 553 TFSNVYKAFIENGKIDVALRLLRKHIDPKVS 583
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 348 SIFLRILFDKKYALPYRVVDAVVFHFL 268
SIF+ +F+ ALP +V ++ HF+
Sbjct: 153 SIFVYTVFNISCALPRNIVQMIISHFI 179
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,663,534
Number of Sequences: 5004
Number of extensions: 76677
Number of successful extensions: 228
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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