Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1h01f
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bysti... 51 7e-07
AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical ... 31 0.58
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 31 1.0
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 31 1.0
U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 30 1.3
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 2.3
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 2.3
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 29 3.1
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 3.1
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 3.1
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 3.1
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 3.1
AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein. 28 5.4
AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like ... 28 5.4
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 7.1
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 7.1
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 7.1
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 7.1
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 7.1
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 27 9.4
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical ... 27 9.4
>U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bystin
(adhesion protein)related protein 1 protein.
Length = 449
Score = 51.2 bits (117), Expect = 7e-07
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Frame = +3
Query: 180 KLKPSQVGKNLALADQIESGNSVKIKNRTKD---RNRHD-EDDEFVKADLSKKILKTARR 347
K + ++ N L +Q+E+G K ++ ++ R R D + DEFV LS KIL AR+
Sbjct: 7 KGRGDKLSANAPLDNQLEAGKVAKQRDELREKQKRKREDSQTDEFVPDSLSSKILNEARK 66
Query: 348 QQAE--LEDNEIGPSPA-----KHVTLVXXXXXXXXXXXXXXXXXLEPDTYYDN--IEIN 500
Q E LE E + + + + E D +++ +E++
Sbjct: 67 QLLEEALERQETESATSSVPKRQRGAWLGADASGDKSDDDDDDNEEEDDNGFEDQVVELD 126
Query: 501 EADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQFS--DAETLKLQNIDPRIKTM 674
DE L F ++ TL DII+ KI K + + S D ++++DP + M
Sbjct: 127 PRDEADLARFLKKDAIQMSTLYDIIQAKIEAKQNDAELALSQVDPNEFNMRDMDPEVVEM 186
Query: 675 YE 680
YE
Sbjct: 187 YE 188
>AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical
protein Y24D9B.1 protein.
Length = 550
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 195 QVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTARRQ 350
+ K+ A D +ES S + RT+ + E DE + +L ++++ ARR+
Sbjct: 371 RTSKHSATTDSVESTASTQSGERTESSTQSIEADEDIARELDAQLIEEARRE 422
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = +3
Query: 144 DHLVETNMGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSK 323
D+ E K K VG + + E S K N+ K + ++DDE + D+S+
Sbjct: 69 DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKK-NNKKKAQESSEDDDEESEGDVSE 127
Query: 324 KILKTARRQQAELEDNEIGPS 386
+ +K ELE+ + P+
Sbjct: 128 EDVKPQIHSDDELEEEDEAPT 148
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = +3
Query: 144 DHLVETNMGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSK 323
D+ E K K VG + + E S K N+ K + ++DDE + D+S+
Sbjct: 69 DYKPEKRKSSAKNGKKKDVGSDSEDDYKPEKKKSKK-NNKKKAQESSEDDDEESEGDVSE 127
Query: 324 KILKTARRQQAELEDNEIGPS 386
+ +K ELE+ + P+
Sbjct: 128 EDVKPQIHSDDELEEEDEAPT 148
>U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical
protein ZK742.2 protein.
Length = 594
Score = 30.7 bits (66), Expect = 1.0
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +3
Query: 207 NLALADQIESGNSVKIKNRTKDRNRHDED---DEFVKADLSKKIL--KTARRQQAELE 365
+L AD+I + +++TK R +HD D E V+ L KK+L KT +R A+L+
Sbjct: 519 HLKEADKIRQMIEKEYESKTKRRKKHDVDTTASEDVRNRLQKKLLDPKTIQRVSADLD 576
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 195 QVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTARRQ 350
+ K+ A D +ES S + RT+ + E DE + +L ++++ +RR+
Sbjct: 371 RTSKHSATTDSVESTASTQSGERTESSTQSIEADEDIARELDAQLIEESRRE 422
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +3
Query: 114 TVVFVKSFLTDHLVETNMGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDED 293
TV+ + LT + N + +K++ ++L + S V K + + N HD+D
Sbjct: 228 TVLTKVNKLTQQIDNNNDNQEQKIETRISAEDLVRVSALLSRLDVYQKEQAQGNNTHDQD 287
Query: 294 DEFVKADLSKKILKTARRQQAELEDNEI 377
E ++A++++ K + N I
Sbjct: 288 IEALQAEIAQVFTKNMAMSANDAPGNSI 315
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/88 (21%), Positives = 39/88 (44%)
Frame = +3
Query: 114 TVVFVKSFLTDHLVETNMGKVKKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDED 293
TV+ + LT + N + +K++ ++L + S V K + + N HD+D
Sbjct: 214 TVLTKVNKLTQQIDNNNDNQEQKIETRISAEDLVRVSALLSRLDVYQKEQAQGNNTHDQD 273
Query: 294 DEFVKADLSKKILKTARRQQAELEDNEI 377
E ++A++++ K + N I
Sbjct: 274 IEALQAEIAQVFTKNMAMSANDAPGNSI 301
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 177 KKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEF---VKADLSKKILKTARR 347
KK + +G+ + E ++N+ KDR R + DE + D K K RR
Sbjct: 749 KKKEKENIGRRDRGDKRAERHRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRR 808
Query: 348 QQAELEDNE 374
Q ++ ED +
Sbjct: 809 QDSDDEDRK 817
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 177 KKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEF---VKADLSKKILKTARR 347
KK + +G+ + E ++N+ KDR R + DE + D K K RR
Sbjct: 749 KKKEKENIGRRDRGDKRAERHRDQSVENKDKDRRRRQDSDENRRPERGDDRKDRSKDRRR 808
Query: 348 QQAELEDNE 374
Q ++ ED +
Sbjct: 809 QDSDDEDRK 817
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 492 EINEADEEALKLFKSSKTERVRTLADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKT 671
E + E LK ++TE++ T IKEK + +++ Q ++ E + + +D ++T
Sbjct: 73 EAHRKSVEQLKEKHKNETEKLETQIKEIKEKGEEDVRKVELQRANLEKQRTEALDIHLET 132
Query: 672 MYE 680
M E
Sbjct: 133 MKE 135
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 546 ERVRTLADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTM 674
ERV+ L D++KEK DK L+ D+ K +++D +++ M
Sbjct: 896 ERVQKLEDVVKEK-EDKEIALRRDLEDSHE-KSRDLDDKLRKM 936
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 546 ERVRTLADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTM 674
ERV+ L D++KEK DK L+ D+ K +++D +++ M
Sbjct: 896 ERVQKLEDVVKEK-EDKEIALRRDLEDSHE-KSRDLDDKLRKM 936
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 546 ERVRTLADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTM 674
ERV+ L D++KEK DK L+ D+ K +++D +++ M
Sbjct: 656 ERVQKLEDVVKEK-EDKEIALRRDLEDSHE-KSRDLDDKLRKM 696
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +3
Query: 546 ERVRTLADIIKEKITDKHTELQTQFSDAETLKLQNIDPRIKTM 674
ERV+ L D++KEK DK L+ D+ K +++D +++ M
Sbjct: 896 ERVQKLEDVVKEK-EDKEIALRRDLEDSHE-KSRDLDDKLRKM 936
>AF149288-1|AAF99087.1| 644|Caenorhabditis elegans KRP85 protein.
Length = 644
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +3
Query: 177 KKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTARRQQA 356
K+L+ S+ + L Q+E +VK++ ++R +++ FVK+ KK+ + +A
Sbjct: 462 KELEQSKF-QEAHLRTQLEERTAVKVE--IEERYSSLQEEAFVKSKKIKKVSNELKDARA 518
Query: 357 ELEDNE 374
EL+D E
Sbjct: 519 ELKDLE 524
>AF000262-5|AAN60522.1| 100|Caenorhabditis elegans Hypothetical
protein C48E7.11 protein.
Length = 100
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 258 NRTKDRNRHDEDDEFVKADLSKKILKTARRQQAELE 365
NRT+ + R +E+D K D KK +T R+ +L+
Sbjct: 32 NRTRQKKRQEENDTAEKVDELKKENETLERKVEQLQ 67
>AC024801-1|AAK68513.1| 646|Caenorhabditis elegans Kinesin-like
protein protein 20 protein.
Length = 646
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +3
Query: 177 KKLKPSQVGKNLALADQIESGNSVKIKNRTKDRNRHDEDDEFVKADLSKKILKTARRQQA 356
K+L+ S+ + L Q+E +VK++ ++R +++ FVK+ KK+ + +A
Sbjct: 464 KELEQSKF-QEAHLRTQLEERTAVKVE--IEERYSSLQEEAFVKSKKIKKVSNELKDARA 520
Query: 357 ELEDNE 374
EL+D E
Sbjct: 521 ELKDLE 526
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 VRTLADIIKEKITDKHTELQTQFSDAET 635
VR+ AD +K KIT++ Q SD+ET
Sbjct: 6318 VRSAADDLKTKITNELPSFTAQLSDSET 6345
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 VRTLADIIKEKITDKHTELQTQFSDAET 635
VR+ AD +K KIT++ Q SD+ET
Sbjct: 6847 VRSAADDLKTKITNELPSFTAQLSDSET 6874
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 VRTLADIIKEKITDKHTELQTQFSDAET 635
VR+ AD +K KIT++ Q SD+ET
Sbjct: 6528 VRSAADDLKTKITNELPSFTAQLSDSET 6555
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 VRTLADIIKEKITDKHTELQTQFSDAET 635
VR+ AD +K KIT++ Q SD+ET
Sbjct: 6318 VRSAADDLKTKITNELPSFTAQLSDSET 6345
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 VRTLADIIKEKITDKHTELQTQFSDAET 635
VR+ AD +K KIT++ Q SD+ET
Sbjct: 6847 VRSAADDLKTKITNELPSFTAQLSDSET 6874
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 VRTLADIIKEKITDKHTELQTQFSDAET 635
VR+ AD +K KIT++ Q SD+ET
Sbjct: 6528 VRSAADDLKTKITNELPSFTAQLSDSET 6555
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 552 VRTLADIIKEKITDKHTELQTQFSDAET 635
VR+ AD +K KIT++ Q SD+ET
Sbjct: 5737 VRSAADDLKTKITNELPSFTAQLSDSET 5764
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +3
Query: 483 DNIEINEADEEALKLFKSSKT---ERVRTLADIIKEKITDKHT--ELQTQFSDAETLKLQ 647
D+I I+ ++++ +KLF SKT + ++TL+++ + H E +D T++L
Sbjct: 182 DSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEFLLVATDHPTVRLY 241
Query: 648 NID 656
NI+
Sbjct: 242 NIE 244
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +3
Query: 177 KKLKPSQVGKNLALAD-QIESGNSVKIKNRTKD----RNRHDEDDEFVKADLSKKILKTA 341
KKLK + + + L QI+ S K K R+K + HD D + SKK K+A
Sbjct: 74 KKLKVTDKTELIELLQKQIKKNKSQKSKKRSKTVSDHESNHDSDGSYGTPKTSKKSKKSA 133
Query: 342 RRQ 350
+ +
Sbjct: 134 KNE 136
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 249 KIKNRTKDRNRHDEDDEFVKADLSKKILKTARRQQAELEDNE 374
+I R + N DE+DE ++ K I+KT R + +++D+E
Sbjct: 2141 RIPTRRRPSNIPDEEDEGGVIEVRKMIMKT-REPEPDVDDSE 2181
>AC006624-3|AAF39786.2| 301|Caenorhabditis elegans Hypothetical
protein C53D5.4 protein.
Length = 301
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 495 INEADEEALKLFKSSKTERVRTLADIIKEKIT--DKHTELQTQFSDAETLKLQNI 653
+ E + A+K+ K + ++ L+D +KEK+T + H +L + A+ +KLQ++
Sbjct: 56 LREQQDLAVKVEKVQENQK--NLSDFVKEKLTNCNCHVQLDVRNLLAKEMKLQDL 108
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,914,458
Number of Sequences: 27780
Number of extensions: 198751
Number of successful extensions: 883
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -