Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV1g15f
(691 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_1022 - 10435409-10435564,10435950-10436219,10436820-104371... 33 0.28
12_01_0425 + 3347804-3348284,3348544-3348759,3349038-3349588,334... 32 0.49
06_03_0215 - 18080286-18080914,18080925-18080997 31 0.65
06_01_0927 - 7155348-7155753,7156053-7156252,7156401-7156501,715... 31 0.86
08_02_0493 - 17770723-17770758,17770772-17770996,17771051-177720... 31 1.1
10_06_0156 + 11310352-11310504,11310591-11310764 30 1.5
03_04_0044 + 16754638-16754676,16755472-16755598,16756325-167564... 30 2.0
04_04_1294 - 32424762-32426309 29 2.6
03_01_0343 - 2699518-2700114 29 2.6
02_02_0182 - 7547671-7548501,7549236-7549310,7550520-7550744 29 2.6
01_06_1463 + 37535360-37535617 29 2.6
03_05_0158 + 21348534-21348851 29 4.6
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 28 6.1
03_01_0545 - 4086692-4087591 28 6.1
03_01_0051 + 445035-445303,445380-445590,445737-445930,446151-44... 28 6.1
10_08_0010 - 14078740-14079270 28 8.0
09_03_0130 - 12609417-12610462,12610786-12611040,12611139-126112... 28 8.0
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 8.0
07_01_0860 - 7142913-7144895 28 8.0
06_03_0143 + 17215975-17216745 28 8.0
04_03_0872 + 20452534-20453271 28 8.0
01_01_0492 - 3632812-3633189,3633563-3633709,3633906-3633995,363... 28 8.0
>12_01_1022 -
10435409-10435564,10435950-10436219,10436820-10437125,
10437932-10438057,10439825-10439893,10440443-10440487,
10440717-10440776,10441527-10441589,10442186-10442266,
10442494-10442916
Length = 532
Score = 32.7 bits (71), Expect = 0.28
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -2
Query: 342 EPPVLIDAAVEWAHPGV-LADQGADLPSSIRALPVTTAHEK-PVVPGGDETRGGASVPG 172
E V ++ VE G+ +ADQG +L LP T E PVV GDE GG +PG
Sbjct: 33 EDEVEVEVEVEEQLAGLAIADQGEEL-----LLPKPTGWEDGPVVVAGDEVSGGEKLPG 86
>12_01_0425 +
3347804-3348284,3348544-3348759,3349038-3349588,
3349752-3349815,3349915-3349975,3350271-3350409,
3350561-3350677,3350794-3350971,3351218-3351828
Length = 805
Score = 31.9 bits (69), Expect = 0.49
Identities = 29/90 (32%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Frame = +2
Query: 176 GTDAPPRVSSPPGTTGFSWAVVTGSARM-LEGRSAPWSASTPGWAHSTAASIRTGGSTIR 352
GT P S+ P G + A GS+ G A ++STPG+ S++AS T S
Sbjct: 68 GTTTPAFGSTSPSLFGATSAPAFGSSGFGSSGTPAFGASSTPGFGASSSASFGTSTSAFS 127
Query: 353 EAGLPRTWSAGSRGKGTPTHT---PAHAQT 433
P S TP T P AQT
Sbjct: 128 FGSSPSFGQTASTFGSTPFGTSTSPFGAQT 157
>06_03_0215 - 18080286-18080914,18080925-18080997
Length = 233
Score = 31.5 bits (68), Expect = 0.65
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 300 PGVLADQGADLPSSIRALPVTTAHEKPVVPGGDETRGGASVP 175
PGV LPS +R+L +A PVV GGD GA +P
Sbjct: 121 PGVSRGPSLSLPSPLRSLGRRSA--APVVAGGDHRGAGARLP 160
>06_01_0927 -
7155348-7155753,7156053-7156252,7156401-7156501,
7156646-7156862
Length = 307
Score = 31.1 bits (67), Expect = 0.86
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 173 PGTDAPPRVSSPPGTT--GFSWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRTGGST 346
P + P + P G+ WA G ++ R AP++A+ G+A A+ GG +
Sbjct: 192 PEFEFPAKPMRPRGSVWDASDWATDGGRTKVDWAR-APFTAAFQGFAVDACAAAAGGGVS 250
Query: 347 IREAGLPRTW 376
+ G P TW
Sbjct: 251 SDDCGSPDTW 260
>08_02_0493 -
17770723-17770758,17770772-17770996,17771051-17772033,
17772196-17772720,17772801-17772990
Length = 652
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -2
Query: 297 GVLADQGADLPSSIRALPVTTAHEKPVVPGGDETRGGAS 181
GV A GA +PS+ A PV+ A + V+ GGD T+GGAS
Sbjct: 130 GVGAPFGA-VPSTASA-PVSKAGGEEVLVGGDVTKGGAS 166
>10_06_0156 + 11310352-11310504,11310591-11310764
Length = 108
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 278 PWSASTPGWAHSTAASIRTGGSTIREAGLPRTWSAGSRGKGT 403
P A+TP + STAA GGS +R+AGL R A +R + T
Sbjct: 37 PRRATTPRRSSSTAA----GGSVLRDAGLLRAELAAARREAT 74
>03_04_0044 +
16754638-16754676,16755472-16755598,16756325-16756451,
16756866-16757431,16757896-16758211,16758373-16758613,
16758734-16758823,16759343-16759780,16759877-16760185,
16760392-16760406
Length = 755
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = -2
Query: 342 EPPVLIDAAVEWAHPGVLADQGADLPSSIR-ALPVTTAHEKPVVPGGDETRGGASVPGAH 166
+P V + EWA PG + ++ + R +LP T E VV + G ++PG+
Sbjct: 22 DPRVQKERQAEWARPGRVFNRNTNKGGYFRNSLPGVT-REFRVVKDNRQKVVGETIPGSF 80
Query: 165 HEG 157
H G
Sbjct: 81 HNG 83
>04_04_1294 - 32424762-32426309
Length = 515
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +2
Query: 155 FPS*WAPGTDAPPRVSSPPGTTGFSWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRT 334
FP+ A G APP PPG S G A G +A +A G+ + A +
Sbjct: 445 FPN--AAGVQAPPGFQGPPGFQ-TSAGFQVGQAASQAGTAAAAAAGAAGYQAAAAGQGQV 501
Query: 335 GGSTIREAG 361
G+ I AG
Sbjct: 502 PGTQIGGAG 510
>03_01_0343 - 2699518-2700114
Length = 198
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +2
Query: 173 PGTDAPPRVSSPPGTTGF---SWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRTGGS 343
P T APP V+SPP ++ F S+A T + ++G + + S+ + S
Sbjct: 92 PPTPAPPPVTSPPMSSSFAATSYAGGTATVAGVDGEAMRAAGSSDSHIRELSLLGGADSS 151
Query: 344 TIREAGLP-RTWSAGSRGKGTPTHTP 418
T R+ L R G G G+P TP
Sbjct: 152 TDRDHDLHLRLGRHGRGGDGSP-RTP 176
>02_02_0182 - 7547671-7548501,7549236-7549310,7550520-7550744
Length = 376
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/68 (23%), Positives = 27/68 (39%)
Frame = +2
Query: 173 PGTDAPPRVSSPPGTTGFSWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRTGGSTIR 352
P + V+ PP G + A S+R++ G +P + A + GG +
Sbjct: 282 PSSPTYSLVAPPPNPFGAAAAAAGSSSRVMSGACSPVAGGDVQMADAARREFAFGGEGGK 341
Query: 353 EAGLPRTW 376
GL + W
Sbjct: 342 MTGLVKAW 349
>01_06_1463 + 37535360-37535617
Length = 85
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/83 (33%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Frame = +2
Query: 185 APPRVSSPPGTTGFSWAVV---TGSARML--EGRSAPWSASTPGWAH--------STAAS 325
A PR + G G W + TGS + EG + PG H S AA
Sbjct: 2 ATPRAAI--GAGGLPWTAIAGGTGSQPVAAWEGSAGGTGGQRPGGPHGRRRGRRISRAAR 59
Query: 326 IRTGGSTIREAGLPRTWSAGSRG 394
+ T + I GLPRT SAG G
Sbjct: 60 MATPWAAIGAGGLPRTASAGGTG 82
>03_05_0158 + 21348534-21348851
Length = 105
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = +2
Query: 245 GSARMLEGRSAPWSASTPG-WAHSTAASIRTGGSTIREAGLPRTWSAGSRGKGTPTHTP 418
GSA ++ W + G W H+ A S R + R P G R +G P P
Sbjct: 11 GSAAAAAAAASSWRHADAGFWQHADAGSWRHADAGRRYLARPDPSCGGGRQRGAPDSPP 69
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 305 AHSTAASIRTGGSTIREAGLPRTWS---AGSRGKGTPTHTPAHAQT 433
A +AAS GG R+AG +W+ +GSRGKG PA T
Sbjct: 161 ADPSAASAGGGGGGGRKAG--SSWADSTSGSRGKGKAAEHPARGAT 204
>03_01_0545 - 4086692-4087591
Length = 299
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 181 RTGSPSRREPATCQSAPLLR*GRARPAASRTHTLTRLAS*YTHAHCRSCRSA 26
R S +R+ P ++PL R G A HT T L + + CR RSA
Sbjct: 87 RASSSARQRPPWTCTSPLQRHGSTTMQALPYHTRTPLTNSRSSLSCRRRRSA 138
>03_01_0051 +
445035-445303,445380-445590,445737-445930,446151-446228,
447049-447141,448495-448525,448729-449058
Length = 401
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1
Query: 199 DARGSVRTGSPSRREPATCQSAPLLR*GRARPAASR 92
D RT +P REPATC AP + RP A R
Sbjct: 324 DEYSCCRTPTPGIREPATCPPAP----RKPRPVACR 355
>10_08_0010 - 14078740-14079270
Length = 176
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 299 GWAHSTAASIRTGGSTIREAGLPRTWSAGSRGKGTPTHTPAHAQTDARTHKKLRTEVSE 475
GWA ++ GG+T E G P A + + PAH + H + R + E
Sbjct: 31 GWAPLASSERCIGGATDAEEGSPAPAMAAAAAQPPQRRLPAHRLYRSHPHFRHRQPLQE 89
>09_03_0130 -
12609417-12610462,12610786-12611040,12611139-12611253,
12611376-12611428,12611854-12612114,12612252-12612302,
12612412-12612660,12612779-12613007,12613292-12613666
Length = 877
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/79 (27%), Positives = 31/79 (39%)
Frame = +2
Query: 170 APGTDAPPRVSSPPGTTGFSWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRTGGSTI 349
AP PP PP A +G +R ++G S S P W+ S+R +
Sbjct: 13 APPPPPPPPPPPPPPLRRLLTATRSGGSRWVDGSEVGSSESAP-WSLDGDRSLRLSVDSA 71
Query: 350 REAGLPRTWSAGSRGKGTP 406
AG ++G G G P
Sbjct: 72 ASAG----GASGGGGGGGP 86
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/75 (25%), Positives = 27/75 (36%)
Frame = +2
Query: 191 PRVSSPPGTTGFSWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRTGGSTIREAGLPR 370
P S+PP W V + R G S S+S A + ++ IR +
Sbjct: 625 PSASAPPAAAPREWTVSLTTGRYSFGDSGASSSSAAPRAPAAPLALHAPAPHIRAPSMAA 684
Query: 371 TWSAGSRGKGTPTHT 415
A RG+ P T
Sbjct: 685 PPPAAPRGRTMPPTT 699
>07_01_0860 - 7142913-7144895
Length = 660
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 262 GREVRALVCEYTGVGPLYRCVNQNRRLYDKRSRSSEDVERG 384
G + ALV EY G G L+R + Q + +R + DV G
Sbjct: 399 GGDHHALVYEYLGGGNLWRALFQGELAWRRRLEVAVDVAEG 439
>06_03_0143 + 17215975-17216745
Length = 256
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +2
Query: 170 APGTDAPPRVSSPPGTTGFSWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRTGGSTI 349
A G PPR+ P + +A +A L +A PG AHSTA++ + +
Sbjct: 98 AGGGALPPRLRCCPALAAWMYAAYAPTA--LLAAAAGGGGGVPGAAHSTASAAEAVAAVV 155
Query: 350 REAGLP 367
LP
Sbjct: 156 DLPVLP 161
>04_03_0872 + 20452534-20453271
Length = 245
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +2
Query: 176 GTDAPPRVSSPPGTTGFSWAVVTGSARMLEGRSAPWSASTPGWAHSTAASIRTGGSTIRE 355
G +P RV P G G A+ G R+L R A ++A ++ +TI
Sbjct: 60 GPGSPSRV--PQGQVGLLAALHEGDKRLLLRRGGGGGGGAAAAAAASAGTLLRRKATIAA 117
Query: 356 AGLPRTWSAGSRGKGTPTHTPAHA 427
A ++G G +PT +P A
Sbjct: 118 AAAS---ASGGGGSLSPTQSPTSA 138
>01_01_0492 -
3632812-3633189,3633563-3633709,3633906-3633995,
3634278-3634331,3636434-3636598,3637252-3637488,
3637610-3637696,3637846-3638022
Length = 444
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 377 SAGSRGKGTPTHTPAHAQTDARTHKKLRTE 466
SA RG GT T P H + + R ++K+ +
Sbjct: 30 SAKHRGNGTTTTVPFHGKDELRRYRKIMAQ 59
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,594,443
Number of Sequences: 37544
Number of extensions: 399148
Number of successful extensions: 1473
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1472
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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