Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1g15f
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   1.6  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   2.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   2.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   2.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   2.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   6.3  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   6.3  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   8.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.4  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 506 SLSIMYFIAYSNRQNRLCHANE---AASTALQ-LTRYMINFHDV 625
           S+ I+  +AYS R NR+ H NE   A S  +Q +     NF +V
Sbjct: 357 SVKIIQNLAYSGRMNRI-HKNEYMLALSNRMQKIVNNDFNFDEV 399


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 246 EALGCWKGGPRPGLRVHRGGPTLPLRQSEP 335
           E + C   GP P       G T  LR+ EP
Sbjct: 423 EIVTCTNCGPNPCTHTTTNGCTAELRKKEP 452


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 246 EALGCWKGGPRPGLRVHRGGPTLPLRQSEP 335
           E + C   GP P       G T  LR+ EP
Sbjct: 409 EIVTCTNCGPNPCTHTTTNGCTAELRKKEP 438


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 246 EALGCWKGGPRPGLRVHRGGPTLPLRQSEP 335
           E + C   GP P       G T  LR+ EP
Sbjct: 443 EIVTCTNCGPNPCTHTTTNGCTAELRKKEP 472


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 246 EALGCWKGGPRPGLRVHRGGPTLPLRQSEP 335
           E + C   GP P       G T  LR+ EP
Sbjct: 392 EIVTCTNCGPNPCTHTTTNGCTAELRKKEP 421


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 239  VTGSARMLEGRSAPWSASTPGWAHSTAASIRT-GGSTIR 352
            VTGS R+ EG+S+  +A  P   +   A I + GG  +R
Sbjct: 1289 VTGSTRVGEGQSSKVAAQVP--TNRVPARITSFGGHVVR 1325


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 239  VTGSARMLEGRSAPWSASTPGWAHSTAASIRT-GGSTIR 352
            VTGS R+ EG+S+  +A  P   +   A I + GG  +R
Sbjct: 1285 VTGSTRVGEGQSSKVAAQVP--TNRVPARITSFGGHVVR 1321


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -1

Query: 604 IACELQCCTGSLIGM 560
           + C++ CCT S++ +
Sbjct: 113 LTCDVLCCTASILNL 127


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -1

Query: 604 IACELQCCTGSLIGM 560
           + C++ CCT S++ +
Sbjct: 113 LTCDVLCCTASILNL 127


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -1

Query: 604 IACELQCCTGSLIGM 560
           + C++ CCT S++ +
Sbjct: 113 LTCDVLCCTASILNL 127


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 343 YDKRSRSSEDVERGEQ 390
           Y+KRS   +DVE G +
Sbjct: 235 YEKRSTDFQDVESGSE 250


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 343 YDKRSRSSEDVERGEQ 390
           Y+KRS   +DVE G +
Sbjct: 235 YEKRSTDFQDVESGSE 250


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 646 G*DSTHCNIMEINHIACELQCCTGSLI 566
           G +  H NI+ I H+       TG LI
Sbjct: 2   GKEKIHINIVVIGHVDSGKSTTTGHLI 28


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -1

Query: 646 G*DSTHCNIMEINHIACELQCCTGSLI 566
           G +  H NI+ I H+       TG LI
Sbjct: 2   GKEKIHINIVVIGHVDSGKSTTTGHLI 28


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 177 VRTLPRASHHPPERQVFHGQSLREAL 254
           +RT   AS H PE  +   Q L++ +
Sbjct: 148 IRTPTEASWHSPEAHISVAQKLQKEI 173


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,716
Number of Sequences: 438
Number of extensions: 3560
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)