Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV1g08f
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    73   3e-15
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    73   3e-15
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   8.4  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 72.9 bits (171), Expect = 3e-15
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +3

Query: 99  ELVSTFLVHRHGDRTPVEITLAMSTDPAALEQAAAPYGFGQLTEFGKKTSYKVGEYIKSR 278
           EL    ++ RHGDR P E       DP  L     P   G+LT  GK   Y++G++++ R
Sbjct: 1   ELKQINVIFRHGDRIPDEKNEMYPKDPY-LYYDFYPLERGELTNSGKMREYQLGQFLRER 59

Query: 279 YGALLSDRYNASEIFIRSTDSTRTKMTVLTAMAAVYPPPE-DNWSSEIHW 425
           YG  L D Y    +   S+   RTKM++   +AA+YPP +   W+ +++W
Sbjct: 60  YGDFLGDIYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNW 109


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 72.9 bits (171), Expect = 3e-15
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = +3

Query: 99  ELVSTFLVHRHGDRTPVEITLAMSTDPAALEQAAAPYGFGQLTEFGKKTSYKVGEYIKSR 278
           EL    ++ RHGDR P E       DP  L     P   G+LT  GK   Y++G++++ R
Sbjct: 16  ELKQINVIFRHGDRIPDEKNEMYPKDPY-LYYDFYPLERGELTNSGKMREYQLGQFLRER 74

Query: 279 YGALLSDRYNASEIFIRSTDSTRTKMTVLTAMAAVYPPPE-DNWSSEIHW 425
           YG  L D Y    +   S+   RTKM++   +AA+YPP +   W+ +++W
Sbjct: 75  YGDFLGDIYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNW 124


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 101 FGSVCSVASPDVLGQRSQDAYKVHDSHVG 15
           F  +CS A+P ++    Q+ Y+  DS  G
Sbjct: 500 FTEICSTATPMMVINMLQNLYEQFDSFCG 528


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 387  PPPEDNWSSEI 419
            PPP ++W+ EI
Sbjct: 999  PPPREDWNGEI 1009


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 370 RWPLSTHLLKTTGAQR 417
           RWP ++ +  TTGA++
Sbjct: 780 RWPATSVITTTTGARQ 795


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,198
Number of Sequences: 438
Number of extensions: 4846
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)